Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral4334g00030 | ATGACAAGGGCTGTGCGCAGTAGGATACTCAAAGATGCGAATGGTGATATTAGCGATCATCTACGCAACCATATCCATTTAACAAATTGCATTCACTTGAAGAACCATATGCACAAAAACAGCCCCATTCTTGCTGATAGGTCGCTTATGAGGGAACTAGTTGTGTTGCAGAGATCGCGCTCTCTGAGAGACCCTTCAGCAAGTCCTTCTTCATGGCATTCTCCTTCTATAATTGAGGTGCTTTCCAAGAGGGTTGACAATGACGTGGTGCTTCAGGAGGGAAGAAGGTCTGTAGGAATTGAACGCCGGAAAGAAGGAAGGAGATTGTCTGGAACCTCACCACCTGTTGTTAATTTAGGTCCATCAAAAGTTGCTCCGGGTGAGGAGAGCCGGGGTAATGATGGAGTGTCAGCAAGTAGAGACCGCAGCAGCAGGAGTGGAATTGGGGACGGGCGGAAAGTTGGAAGAGAAGAGTCTGGTCGGAAGAGCGACAGGCCTGATTATATGGGTCCCAGCAAAGAGCAACTTCACAGTCAGCTTGGCAAAGATTTGACTGAAGATGTTGTTTCAAGGCATTCTGAATCTAAAGAGAGAAAGAGCAAACAAAGGGGGAAGCATGTTCAAGATGTTCAGTTCAAGACCCTTTCTGAGCAGCTGAACGATGTTCCACTGGACAGTGATGATTTGGCATCTTCAAACAATAATGTCCAAAGACGGTTTCCTAGGCAGCAGAAAATTATTGAGGCGCCCGAAGCCAGCACACGTGGTCATGGAAATGGAGTGAACAGAGGAAAAAGGCGTAAATTTCGGAGTGCAAGAAGAGCTCAGGCTTCTGCGGCATCTAAAGATGTCGGTGCTGAGAATGAACTGTCTGTTGCTTCGAACTCATTTGCTTATGGTTCAGCCCACCATAGATATCACATGGAAGAGCCAGATGAATATGGAGAGGAAAATGTCACCAGGGCACCCAAAAATGGGTGTGGCATTCCTTGGAATTGGTCTAGAATTCATCACAGAGGCAAAACATTCCTTGACAGGGCTGGACGAAGTTTCTCTTGTGGCTTATCTGACTCAACTAAAAAAGGGGCATTGGATGCCAATGGAAGAAATATTTCTGATATGCCAGTGGCATCTGACCAATCAAGCTCATTTACCAGGTCTGATGGAGAGGCAATGCCGCTGCTAGTTGAGGCATCTGGATCTCAGGGAAGTACTGAGAATGCTTGTTGGGGCCATGACTATTCCGGAGAGCTTGGTATTTTTGCTGATAACTTATTGAAGCATGACATTGATTCTGACCTCGCTTCTGATGTTAGATCTGGGGATCAGCCTAAGATGAGAGTGAATCGCCATGGCAGGCATCAAAGCTTAACGCAAAAATATCTACCCCGAACCTTCAGAGATTTAGTTGGGCAGAATTTGGTGGCACAAGCTCTTTCAAATGCAGTCATGAGAAGAAAAATTGGATTTCTTTATGTGTTTTATGGACCCCATGGCACTGGAAAAACTTCATGTGCTCGGATATTTGCTAGAGCTTTAAATTGTCATTCTTCTGAACACCCAAAACCATGTGGCTTTTGCAATTCTTGTGTAGCACATGATATGGGCAAGAGCAGAAGTATAAGGGAAGTTGGTCCAGTCAGTAATTTTGACTTTGAGAGCATCATGGATCTACTTGACAATATGATTGTTTCCCAGCTTGCATCACAATACAGAGTGTTTATTTTTGATGATTGTGATACTCTGTCAGCTGAATGCTGGAGTGCCATATCGAAGGTCATTGATCGAGCTCCTAGACGTGTGGTTTTTATTCTTGTTAGTTCGTCTCTTGATGGATTGCCTCATATAATCATATCCAGGTGCCAGAAATTTTTCTTCCCAAAGCTGAAGGATTCAGACATTATGTATACATTACAGAGGATTGCAACTAAAGAGGGTCTAGAAATTGATAGGGATGCCTTGAAACTTATTGTATCAAGATCAGATGGATCGTTAAGAGATGCTGAGATGACCCTTGAACAACTTAGTTTGCTTGGCCAGAGAATATCAGTTCCTCTTGTGCAGGAATTGGTTGGGCTTATATCTGATGAGAAATTGGTCGATCTGCTTGATTTGGCACTCTCCGCAGACACAGTCAACACTGTAAAGAATCTGAGGGTGATAATGGAAACTGGTGTTGAGCCGCTTGCCTTGATGTCTCAGCTTGCCACTGTAATTACTGACATACTTGCTGGGACCTATGATTTCACAAGAGATAGGAGGAGAAGGAAGTTTTTCCGGAGAAATCCATTATCGAAAGAAGATATGGAAAAGCTACGCCAAGCTTTGAAAACCTTATCTGAGGCTGAGAAGCAGTTGAGGATGTCCAATGACAAACTAACCTGGCTGACAGCTGCGTTGCTTCAACTTGCTCCTGACCAGCAATATATGCTGCCAACATCATCTGATAATAGTTTCAATCATAGTCCCTTGCCCCTAAATAAGGTAGATGGGAGAGAAGCAGCCCGGAGAACAAGTACTAATGTTGAAGTTCCTCGCAAAGAGAGACGTTTATCAATGGATTCTAGAATAGAGAATGTCCATGCTGGTAGCTCTGCTGATGGCGTGGCAAAGAGTCTTAGTTCAGATAATAAAAGACTTGCTGTGGCTGGTTTTGTGCCTCAACAGACATCTTCACATGTTACCGATGTGATTAGAATGAATGACAGACAGACTCTGGGTAAAAATCGGAAAGGAATTGAAGAGATATGGTTAGAGGTGCTTGACAGAATTCAGGTTAATGGTGTAAAAGAGTTTTTATATAGAGAAGGGAAGCTGGCCTCTGTTAGTTTTGGTGCTGCTCCAACTGTGCAGTTAATGACCAGTTCTCAACAGACGAAATCTACTACTGAGAAGTTCAGGGGGCATATTTTACAGGCATTTGAATCTGTCCTTGGATGTTCAGTAACGTTAGAAATTAGATGTGAATCAAGCAGAGATGCAGGATCAGGGTCTCAACTCCCTCTTATACTGCCTTCCACTAAAGATAGTTCTGTAGAAAAGAAAATGAGTGAAATTGTAGAAGAAGAAACTTCTCTGAAGGACCCTAAGAATAACGAGAAGCAAGCTGATGTTAACAAAAAGCCAATTGTGACTTCACACTTGGAAAGAAGGAGGCTCAGGGAACAAGGTCAGAGCCGAAGCATTGTGAAAAGTAAGGTATCTCTTGCTCATGTAATCCAGCAGGCAGAAGGACATACACAGCGAAGTGGGTGGTCAAAACGCAAAGCAGTTTCCATTGCTGAAAAGCTTGAACAAGAGAATCTGAGACTAGAGCCAAGATCAAGGAGCTTGCTATGCTGGAAAGCATCACGAGTAAGCCGGCGGAAGCTTTCGCGTTTGAAAGTTAGAACCAGAAAATCTCATGCGTTGTTGAATCTGGTCTCATGTGGAAAATGTCTCACTTCTAAATCTCCAAGGTCAAGCCTCTTTCTTTATTTGTTTAGTCTAATAAAGAGCTCGAGATTGTATATCTGA | 3516 | 0.4343 | MTRAVRSRILKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSLMRELVVLQRSRSLRDPSASPSSWHSPSIIEVLSKRVDNDVVLQEGRRSVGIERRKEGRRLSGTSPPVVNLGPSKVAPGEESRGNDGVSASRDRSSRSGIGDGRKVGREESGRKSDRPDYMGPSKEQLHSQLGKDLTEDVVSRHSESKERKSKQRGKHVQDVQFKTLSEQLNDVPLDSDDLASSNNNVQRRFPRQQKIIEAPEASTRGHGNGVNRGKRRKFRSARRAQASAASKDVGAENELSVASNSFAYGSAHHRYHMEEPDEYGEENVTRAPKNGCGIPWNWSRIHHRGKTFLDRAGRSFSCGLSDSRXKKGALDANGRNISDMPVASDQSSSFTRSDGEAMPLLVEASGSQGSTENACWGHDYSGELGIFADNLLKHDIDSDLASDVRSGDQPKMRVNRHGRHQSLTQKYLPRTFRDLVGQNLVAQALSNAVMRRKIGFLYVFYGPHGTGKTSCARIFARALNCHSSEHPKPCGFCNSCVAHDMGKSRSIREVGPVSNFDFESIMDLLDNMIVSQLASQYRVFIFDDCDTLSAECWSAISKVIDRAPRRVVFILVSSSLDGLPHIIISRCQKFFFPKLKDSDIMYTLQRIATKEGLEIDRDALKLIVSRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGTYDFTRDRRRRKFFRRNPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYMLPTSSDNSFNHSPLPLNKVDGREAARRTSTNVEVPRKERRLSMDSRIENVHAGSSADGVAKSLSSDNKRLAVAGFVPQQTSSHVTDVIRMNDRQTLGKNRKGIEEIWLEVLDRIQVNGVKEFLYREGKLASVSFGAAPTVQLMTSSQQTKSTTEKFRGHILQAFESVLGCSVTLEIRCESSRDAGSGSQLPLILPSTKDSSVEKKMSEIVEEETSLKDPKNNEKQADVNKKPIVTSHLERRRLREQGQSRSIVKSKVSLAHVIQQAEGHTQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVSRRKLSRLKVRTRKSHALLNLVSCGKCLTSKSPRSSLFLYLFSLIKSSRLYI | 1172 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral4334g00030 | 1172 | MobiDBLite | consensus disorder prediction | 101 | 282 | - | - | |
| Pral4334g00030 | 1172 | Pfam | DNA polymerase III, delta subunit | 473 | 630 | - | - | |
| Pral4334g00030 | 1172 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 492 | 677 | IPR027417 | - | |
| Pral4334g00030 | 1172 | FunFam | DNA polymerase III subunit gamma/tau | 451 | 629 | - | - | |
| Pral4334g00030 | 1172 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 701 | 804 | IPR008921 | GO:0003677|GO:0006260 | |
| Pral4334g00030 | 1172 | CDD | HLD_clamp_pol_III_gamma_tau | 630 | 693 | IPR045085 | - | |
| Pral4334g00030 | 1172 | SMART | AAA_5 | 489 | 630 | IPR003593 | GO:0016887 | |
| Pral4334g00030 | 1172 | MobiDBLite | consensus disorder prediction | 366 | 386 | - | - | |
| Pral4334g00030 | 1172 | MobiDBLite | consensus disorder prediction | 145 | 171 | - | - | |
| Pral4334g00030 | 1172 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 459 | 866 | - | - |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral4334g00030 | - | - | gmx:100793832 | 1727.99 |
Showing 1 to 1 of 1 entries