Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4334g00013 ATGGATACTATTACTTGCGGTTTGGTTGAGAAGTTCCGAGACGTAGTGCTCGACCTAACTTGGGAGCAGCTTCTTTATCTCATTCACTATCGCAGAAACATTCGGCACTTCGATGAACAACTTAAGGAACTCATCCTTAAGAGATGCTCCATACAGCATCGAATAGATGAGGCTACGAACAATGTAGAACCAATTGAAGAGGAAGTTCTTCATTGGTTGCTCCAAGTAGATGGGATATCAATGAAAGTACGAAAGCTTCAAGAAAAGAGTCAGGCAAAAACAGAGTGTAGCATAACTTCATGTCCCAACCCTTGGCTACGCTATAAACTGAGCAAAAAGGCAAAGGAGATTGCGCAAGAAGTTGTTGAAATTTGCGGAAAGGGAAACTTTGATAGAGTTTCATATAGTGTTACACCCCCGTCAATGTCAGAATTAACGAACAGAGACAGCAATGAAGGGATTGATTCAAGAGTACCGATTATGAATCAAATGATGGAGGCATTACGGCATCCAAGTGTTAATATGATCGGATTGTGTGGGCTTGGGGGTGTTGGCAAGACCACCATAGCTAGAGAGGTTGAAAAGAAGGTGAAGAATCAAAAGATGTTTAAAAATGTGATCATGGTAATCGTTTCCAAAGAATTGAACGTTGGGAATATTCAAGGCCAGCTTGCTGAGAAGCTGGGTATGCAACTCAATGAAAGAACTGAAGATGTCAGAGCTTCTCGTTTGTGGGAGAGGTTGAAGAAAGAGAAGAATATGCTCCTAATATTGGATGACCTTTGGGAGGAACTTGATTTGCGCAAAGTTGGAATTCCCTTTGTCGATGTTGAAAATTATAGCAGAAAGAATGAAGCTTGCAAAATTTTAGCAACTTCAAGGAATAAAAGGCTGCTGTCAGACCTCATGAAATGTCAAGAAATTATCGAAGTGGGTGTTTTGTCAAAGAATGAAGCATGGAAGTTGTTCAAGAGGATTGCCGAATTTTCTATTGAATCAGGCAATCCCGATTTGAAACCTATAGCGTATGAGATTGTTCAAAAGTGCGGAGGCCTGCCACTAGCGATTGCTACAGCTGCCAAGGCATTAAGGGGAAAAAATCTAGATGAGTGGAAAGATTACCTTGCACGATGGAAAAATCATCTAAGGCGAAATAACACAGGTATCAAAGAAGTGGATGCCTCTTTGAAGTTGAGCTATGATCCTCTAAGCCAAGAGAACAAAACTATTTTCTTACTTGCTGCCATGTTAACCCATGATCCCTCGATTGAAGACCTGCACATGTACTCTGTGGGGTTAGATATTTTTCAAGGCATAGAGAACATGGAACAAGCCTATGTTGGAATCTCTGCTATTGTGAGTAAGCTAAAATCATTAAACTTATTTCTGGATAGCGTTTCTAGTCATCATGTTACAATCCATGACGTCTTTCGAGATATTGCATTATTAACTGCATCCGATGAATTACATGCATTCATTTTGAGGCATAAAAGCTTGAGAGAATGGCCAGACGAAGATAAGCTAGAAGGCTACAAGGGAATTTGTTTGCAAGAAAGTGACATCATTGTTGACCTTACAGAAGAGTTGCATGCTCCAACATTAGAATTCTTTCTACTGCACAACACAAAACAACATGACTTGACCATACCCAGCATGTTTTTCAAATCTTCAAAGAAGCTAAAACTGTTGGCATTTACTGATGTGCGTTTTTCATCACTACCATCACTCAGTTTCCTACTAAAACTAAAAACATTGTGTCTGCACTCTTGTTTGCTAGAAGATATAACTGAAGTCACAAGGTTGAAGAATTTAAAAGTGTTAAGTCTTGCTTACTCTGAAATTGAATGGCTACCAATTCAATTAGCAGAGTTGACTTCTTTACAAATGTTGAATTTGTCCCATTGCTCCAAGCTCAAAGTGATTCCCCCAAAACTTCTATCTAGCTTGAAAAAATTGGAAGTGTTGTACATGGGAAACAGCTTTAACCGGTGGAAAATTGAAGGATCTAGTGAAGCTAATGAAAACGTAAGTCTTCAAGAGTTAAAGGATTTGCCAATCTCTTCTCTCGATATTCATATTCCTAATGTCTCTATGTTGCCGGAGGCTTTGTTCTTAGACTTGAATTTGAAGAGATATAGAATATTCATTGGAGAGCATTGGGAATGGCAAGACAATTATGAAACTTCAAAGATATTGAAACTTGAGCTAGACGGTAGTATCCATTTGAAGCCTGGGGTTCGGAAGTTGATGAAAGGAGCTGAAGATTTGTATTTATATGGATCTAATGGGCTTGAAAATGTTCTTCACTGTCATGATGGAAGAGCATTTCCACATTTAAGGCATCTTCAGATTGAAAGTAATGATACTAGTGGATCCATTGTTTTGAACTCAGCACACGATGAAGCTGCAACAAATAACATATCCAACAAAATGTCTGAGTTACTTTTCACAAAGGTGTTACTTCCAAAATTGGAGAGGTTGGAATTGTCCAATTCAATCAATGTGATTCCAATGGTGTGGGACGACCAACTTTCACACACCTCATTTAGCAATTTGAAAATATTGATTGTGAAAAACTGTGGCTTTGTGAAATTGGTGTCCCTTCGTGTGCTGAGATCTTTAAACAACTTGGAAGAACTAGAAGTTACGCAGTGTAACATGTTGGAGTTGGTGTTTGATTTTCAAGATTTGAATTATTATAAAGGGGAGGCGGAGTCGTCATCACTGATTGTGCCGCTGAAAAAGTTAACGTTATATGGATTGCGAAAATTGAAGAATGTGTGGAGCAATCATTATGAAGGAGACGTCTCCTTCCCAAGTCTAAGGAGCGTGCGTGTGTCCGAATGTGAAAGCCTCACAAGTCTGTTTCCTGCATCTATAGCCAAGGGCATGCTTCGTGATCTTGAATTTCTTCGAATACAATACTCTGGTATAGAGGTAATTGTAGCAAAAGATCAAGTTTCAGAATCTGTTGCTACTGTGTTAGAGTTTCCTAGGCTGAATTCCCTTCGGCTTTATTGGCTTCAAAATTTGAAAAGCTTCTATCCACAGAGACACACATTAGAATGGCCACAACTTCAACAGTTAGATGTTAGATATTGTGATGAATTAGAGATATTTGAAAAGGAAGTCTCAAGTTCACTGGAAATACATGAGGAACAGAGCACATTAGCCTCAAAATATCCTCTACTGTCCCATGACAAGGTCACTCATAATTTGGAGGAGTTGACATTGTGGGGTACAGGAGCTGAGATGATAGGGAGTGGCCAGCTTTCAACGTACCGCTTCCCTAAAGTAAAACTGCTTTGTTTAAATACTGGTTATGATAAAGCAACGACTATTTCATACAAATTGTTGTGGAAGAGCTTTCCAAATTTAGAGACGCTGAGACTGCTCGGTGACATTAAGGAGGCTTCTGGAGGGGATGATGTTCCTCTTCCAGTAAAATTGGCTCTCCAATTTAATCAAACTATCACAAGCTTGGCATCACTCTTAGTTTCTCCACCAAATCTCACACATCTCGAAGTGGCATATTGTCATGAGTTGACCACTCTGATGACGTCATCAGTTGCTCGAAGCTTGGTCCATCTCACAAGTCTCTCAATTAGTTGGTGCTCTAACATAAAGGAAATTATATGGAAGCGGGAAGGAGAGGATGATGACGATGAGGAAGTCGTTTTCAGCAAGTTGCAGCATTTGAAAGTTGAACAATTACCAAAATTGATGAGATTTTGCCGCTACAATTACACTTTCAGATTTCCGTTATTGGATCAGCTAATCATAACAGAATGTCCAAGATTCAAAGTATTCTCTCCAGGACTCATTGATACACCATCTCTTAAAAGCGTTCAAGTGTCACATGAAACTTGGGACACCAATCTTAACAAATTCTACCAACAGTACATGTTTCGGTTTTAA 3918 0.3931 MDTITCGLVEKFRDVVLDLTWEQLLYLIHYRRNIRHFDEQLKELILKRCSIQHRIDEATNNVEPIEEEVLHWLLQVDGISMKVRKLQEKSQAKTECSITSCPNPWLRYKLSKKAKEIAQEVVEICGKGNFDRVSYSVTPPSMSELTNRDSNEGIDSRVPIMNQMMEALRHPSVNMIGLCGLGGVGKTTIAREVEKKVKNQKMFKNVIMVIVSKELNVGNIQGQLAEKLGMQLNERTEDVRASRLWERLKKEKNMLLILDDLWEELDLRKVGIPFVDVENYSRKNEACKILATSRNKRLLSDLMKCQEIIEVGVLSKNEAWKLFKRIAEFSIESGNPDLKPIAYEIVQKCGGLPLAIATAAKALRGKNLDEWKDYLARWKNHLRRNNTGIKEVDASLKLSYDPLSQENKTIFLLAAMLTHDPSIEDLHMYSVGLDIFQGIENMEQAYVGISAIVSKLKSLNLFLDSVSSHHVTIHDVFRDIALLTASDELHAFILRHKSLREWPDEDKLEGYKGICLQESDIIVDLTEELHAPTLEFFLLHNTKQHDLTIPSMFFKSSKKLKLLAFTDVRFSSLPSLSFLLKLKTLCLHSCLLEDITEVTRLKNLKVLSLAYSEIEWLPIQLAELTSLQMLNLSHCSKLKVIPPKLLSSLKKLEVLYMGNSFNRWKIEGSSEANENVSLQELKDLPISSLDIHIPNVSMLPEALFLDLNLKRYRIFIGEHWEWQDNYETSKILKLELDGSIHLKPGVRKLMKGAEDLYLYGSNGLENVLHCHDGRAFPHLRHLQIESNDTSGSIVLNSAHDEAATNNISNKMSELLFTKVLLPKLERLELSNSINVIPMVWDDQLSHTSFSNLKILIVKNCGFVKLVSLRVLRSLNNLEELEVTQCNMLELVFDFQDLNYYKGEAESSSLIVPLKKLTLYGLRKLKNVWSNHYEGDVSFPSLRSVRVSECESLTSLFPASIAKGMLRDLEFLRIQYSGIEVIVAKDQVSESVATVLEFPRLNSLRLYWLQNLKSFYPQRHTLEWPQLQQLDVRYCDELEIFEKEVSSSLEIHEEQSTLASKYPLLSHDKVTHNLEELTLWGTGAEMIGSGQLSTYRFPKVKLLCLNTGYDKATTISYKLLWKSFPNLETLRLLGDIKEASGGDDVPLPVKLALQFNQTITSLASLLVSPPNLTHLEVAYCHELTTLMTSSVARSLVHLTSLSISWCSNIKEIIWKREGEDDDDEEVVFSKLQHLKVEQLPKLMRFCRYNYTFRFPLLDQLIITECPRFKVFSPGLIDTPSLKSVQVSHETWDTNLNKFYQQYMFRF 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4334g00013 1305 Gene3D Ribonuclease Inhibitor 707 1059 IPR032675 -
Pral4334g00013 1305 Gene3D Ribonuclease Inhibitor 468 692 IPR032675 -
Pral4334g00013 1305 Pfam NB-ARC domain 161 401 IPR002182 GO:0043531
Pral4334g00013 1305 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1079 1280 - -
Pral4334g00013 1305 Gene3D Ribonuclease Inhibitor 1062 1299 IPR032675 -
Pral4334g00013 1305 Gene3D - 138 311 IPR027417 -
Pral4334g00013 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 412 IPR027417 -
Pral4334g00013 1305 Gene3D - 313 404 IPR042197 -
Pral4334g00013 1305 SUPERFAMILY RNI-like 1071 1292 - -
Pral4334g00013 1305 SMART AAA_5 172 314 IPR003593 GO:0016887
Pral4334g00013 1305 PRINTS Disease resistance protein signature 622 638 - -
Pral4334g00013 1305 PRINTS Disease resistance protein signature 349 363 - -
Pral4334g00013 1305 PRINTS Disease resistance protein signature 175 190 - -
Pral4334g00013 1305 PRINTS Disease resistance protein signature 248 262 - -
Pral4334g00013 1305 SUPERFAMILY L domain-like 474 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4334g00013 Pral-Chr4334 318936 324427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4334g00013 173 481 WRKY Transcription Factor Family AT5G45050 23.871 1.33e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4334g00013 - - pcin:129285257 928.317