Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4334g00010 ATGGATATTACTTGCGGAACATTGAGCAGTTTTGTTGACAAGTTCTGGGACCTAGTGCTGGACCCAACTTGCGAGCAGTTTCATCATCTGTTTTACTATCACAGAAACATTAAGCAGCTCAATGAACGACTTGTGGAACTCGTCGATGAAAGAAGCTCCATACAACATCAAATAGATGAGGCTACAAACAATGCAGAACAAATTGAAGACAAGGTTCTTCATTGGTTGTGCAAAGTAGATGAGATTTCAGAGCAAATTCAAAAGTTTCATGTAGAAGAGAGTCAGGCAAAAACAGAGTGTAGCGTAACTTCATGTCCCAACCCGTGGCTACGCTATAAATTAAGCAAAAGAGCAAAGGCAATGGCACAAGAAGTTGTTGAAATTTGTAGAAAGGGAAATTTCAATACAGTTTCATATCGCGTTCTTCCCCCGTCCATGCCAGAATTAGTCAACAGAGAAAGCAATGAAGGAATTGGTTCAAGAGTGCAGCTTGTGAATCGAATTATGGAGGAATTACGGAATCCAAGTGTTAATATGATCGGATTGTGTGGGCCTGGTGGTGTTGGCAAGACCACTATAGCTAAAGAGGTAGCAAAGAGCCAAAAGATGTTTTCAAAGGTGATCATGGCGACTGTTTCTGATGAGTTGAACGTTGAGAAGATTCAAGGCCAGATTGCTGAGAAGCTGGGTATGCAACTCAATGAAAAAACTGAAGAAGTAAGAGCTTGTCGTCTCTGTGAGAGGTTAAAGCTAGAGAAGAATATGCTCCTCATATTGGACGATCTTTGGGAGGAACTTGATTTGGGAAGCGTTGGAATTCCCTTTGTTGATGTTGAAAATTATAGCAAAAAGGACGGAGGTTGCAAAATTTTACTAACTTCAAGGAATGAAACGCTACTGTCACACCGCATGAAATGTCAAAAACTTATCAAAATAGGTGTTTTGTTAGAGAATGAAGCATTGGAGTTGTTCAAGAGGATTGCTGAACTTTCTGCTGATTCAAGCAATCTTGAGCTGATATCTATAGCCTCTGAGATTGTTCAAAAGTGTGGACGCTTGCCGCTAGCGATTGCTACAGCTGCTAAGGCATTGAGGGGAAAAAATCTGGATGAGTGGAAAGATTACCTTGCACGATGGAGAAATCATTTGAGGAGAAACAACACAGGAATTAAAGAGGTGGATTCTTCTTTGAAGTTGAGCTACGATCCTCTAAGCTTGGAGAATAAAACTATTTTCTTGCTCTCTGCCATGTTGTCCCATGATCCCTCAATTGATGACCTGCTCATGTACTCTCTGGGATTAGATATTCTTGAAGGCATAGAAAACATAGAAGAAGCCCACGTTGGAATATGTGCTATTGTAAGTAAGCTAAAATCATCAAACTTATTTCTTGATAGCTTTTCTGGTCGTCGTGTTACAATACATGACGTCTTTCGAGATGTTGCATTATCAATTGCTTCCAATGAATTAAATGTTTTCATTGTGAGGCATAGAAGCTTGAAAGAATGGCCAGACAAAAATAAGCTAGAAGGCTACAAGGGAATTTGCTTACAAGAGAGTGACATCAGTGAGCTTCCAGAAGAGCTGCATGGTCCAAGATTAGAATTTTTTCTACTAGACAGCACAAAGCGTGATTTGACCATATCCAACATGTTGTTCAAATCTTCAAGGGAGATGAAAGTGTTGGCTTTTACCAATGTGCATTTTTCATCACTACCATCACTTAGTTTCTTACAAAAACTAAAAACATTGTGTCTACACTCTTGCTTACTAGAAGATATAGCTGAGGTTAGAAGCTTGAAGAATTTAAAAGTCCTGAGTCTTGCCTACTCTGAAATTCAACGACTACCAGCTGAATTGGCACAACTGTCTTCTTTACAAATGCTGAATTTGGCCCACTGCTCTGAACTCAAAGTGATTCCCCCAAAGCTCCTATCTAGCTTGAAAAAATTGGAAGTTTTGTACATGGGAAATAGCTTTAATCGATGGAAAGTTGAAGGATCCAGTGAAGCTATTGAAAATGCAAGTCTTGAAGAGTTAAAGGATTTGCCGATCTCTTCACTAGATGTTCATATTCCTAATGTCTCTATGTTGCCGGAGAACTTGTTCTTAGATGTGCATTTGAAGAGATACAGAATACTCATTGGACAGCATTGGGAATGGCAAGGCAATTATGAAAGTTCAAAGATATTGAAAATTGAGCTTGAGAGTAGCATCCATTTGAACACTGGGGTTCGAAAGTTAATGAGGGGAGCTGAAGATTTGTATTTATATGGATCTAATGGGCTTGAAAATGTTCTTCGTGGTCATGATGGAAGAGCATTTCCACATTTAAGGCATCTTCAGATTGAAAGTAATGATACCGTTAGATACATTGTTTTGAACTCGGCACATCATGAAGCTGCAAAAAATAACGTATCTAATAAAATGTCGAAGTTACTTCTCAACCAGGTGTTGCTTCCAAAATTAGAGAGGTTGGAATTGTCCAATTCAATCAATTTGATTCCAACGATATGGGACGACCAACTTTCACACACCTCATTTAGCAATTTGAAAACATTGATTGTGAAAAACTGTGGCTTTGTGAAATTAGTGCCCCTTTGTGTGCTAAAATCTTTATACAATTTGGAAGAACTGGAAGTCAGGAATTGTCACATGTTGGAGATGGTGCTTGATTTTGAAGATTTGAACGAATATAGAGAGACGGTGTCATCATCAACCCAGGTTGTGCCACTGAAGAAGTTAAAGCTATGTGGATTGCCAAAATTGAAGAATGTGTGGAGCAATCACTACCAAGGAAATGTCTTCTTCCCATGTCTAAGGAATGTCAATGTTTTTAGATGTGAAAGTCTCACAAGTATATTTCCTGCATCCATAGCCAAAGGCATGCTTTGTGATCTTGAAGAGCTTCGAATATATCATTGCGGTGCGGATGTAATTGTTGCAAAAGACCAAGTTTCAGAATCTGCTGTTGCTGCATTTGAGTTTCCTAGGCTGACTTCCCTTCAGCTTTATTCGCTTGAAAATTTGAAGAACTTTTATCCACAGAGACACACATTAGAATGGCCAAAACTTCAACGATTATCTATTAGGTATTGCGATGAGTTAGAGATATTTGAAAAGGAAGCCTCAAATTCATTTGAAATACATGAGGAAGGAAGCACACTAGACTCAAAATATCATCTACTATCCTATCACAAGGATATTCGTAATTTGGAGCAGTTGAGATTAGGCGGTAAAGGGGCTGAGATGATAGGGAGTGGCCAGTTTCCAACGTACCCCTTCCCCAAAGTAAAACTGCTTCATCTCTCTGTAAAGAAAGCCACAACTATATCGTACAAATCATTGTTGAAGAGCTTTTCAAAATTAGAGGAGTTAGTGTTGGGTGGTGACATTAAGGAGGCCTTTGGAGGGGACGAAGTTCCCTTTCCAATAAAATTGACTCTTCAGAATCTTTACAAGATGAAAAGCCTGGCACCATCCTTAGTTTCTTTACCAAATCTCACACATCTTACAGTGACAATTTCTTTTCAGTTGACCACTTTGATGACGTCATCAACTGCTCGAAGCTTGGCCCATCTCACACATCTCTCAATTGATCAGTGCTTTGAAACAAAGGAAATCATATCGAAGCAGGAAGGAGAGGATGATGAGGATAAGGAAATCTGTTTCAACAAATTGCAGTACTTGCAATTTCAAAGATGTCCAAGATTGAAGAGATTTTGCAGCCATAATTATACTTTCAGGTTTCCATTATTGGATACTCTAATCATAACCAAATGTCCAATATTTAAAATATTCTGTCCAGGAGTCATTGATACGCCATCTCTTAAAAACATTCAACTGTCACATGACTGGGGAAATCATCATGAAATTTGGGACACCAACCTTAACAAAACAATCAACCAACAGCGATTTGTCGGTACAAGAAAGCTGGTGTTAGATGAGGATGATGTCAGCATGATAAGTAATGACCAATTTCCAGCGGACCGTTTCTCTCACGTGGAAATTCTTCGCATAGAAGGATTTGTTGGTGAAGGGGGAACTCTGCCTTGCCAATTTGACGGTGCTCAAGGTGTCCCAGTGTAA 4089 0.3923 MDITCGTLSSFVDKFWDLVLDPTCEQFHHLFYYHRNIKQLNERLVELVDERSSIQHQIDEATNNAEQIEDKVLHWLCKVDEISEQIQKFHVEESQAKTECSVTSCPNPWLRYKLSKRAKAMAQEVVEICRKGNFNTVSYRVLPPSMPELVNRESNEGIGSRVQLVNRIMEELRNPSVNMIGLCGPGGVGKTTIAKEVAKSQKMFSKVIMATVSDELNVEKIQGQIAEKLGMQLNEKTEEVRACRLCERLKLEKNMLLILDDLWEELDLGSVGIPFVDVENYSKKDGGCKILLTSRNETLLSHRMKCQKLIKIGVLLENEALELFKRIAELSADSSNLELISIASEIVQKCGRLPLAIATAAKALRGKNLDEWKDYLARWRNHLRRNNTGIKEVDSSLKLSYDPLSLENKTIFLLSAMLSHDPSIDDLLMYSLGLDILEGIENIEEAHVGICAIVSKLKSSNLFLDSFSGRRVTIHDVFRDVALSIASNELNVFIVRHRSLKEWPDKNKLEGYKGICLQESDISELPEELHGPRLEFFLLDSTKRDLTISNMLFKSSREMKVLAFTNVHFSSLPSLSFLQKLKTLCLHSCLLEDIAEVRSLKNLKVLSLAYSEIQRLPAELAQLSSLQMLNLAHCSELKVIPPKLLSSLKKLEVLYMGNSFNRWKVEGSSEAIENASLEELKDLPISSLDVHIPNVSMLPENLFLDVHLKRYRILIGQHWEWQGNYESSKILKIELESSIHLNTGVRKLMRGAEDLYLYGSNGLENVLRGHDGRAFPHLRHLQIESNDTVRYIVLNSAHHEAAKNNVSNKMSKLLLNQVLLPKLERLELSNSINLIPTIWDDQLSHTSFSNLKTLIVKNCGFVKLVPLCVLKSLYNLEELEVRNCHMLEMVLDFEDLNEYRETVSSSTQVVPLKKLKLCGLPKLKNVWSNHYQGNVFFPCLRNVNVFRCESLTSIFPASIAKGMLCDLEELRIYHCGADVIVAKDQVSESAVAAFEFPRLTSLQLYSLENLKNFYPQRHTLEWPKLQRLSIRYCDELEIFEKEASNSFEIHEEGSTLDSKYHLLSYHKDIRNLEQLRLGGKGAEMIGSGQFPTYPFPKVKLLHLSVKKATTISYKSLLKSFSKLEELVLGGDIKEAFGGDEVPFPIKLTLQNLYKMKSLAPSLVSLPNLTHLTVTISFQLTTLMTSSTARSLAHLTHLSIDQCFETKEIISKQEGEDDEDKEICFNKLQYLQFQRCPRLKRFCSHNYTFRFPLLDTLIITKCPIFKIFCPGVIDTPSLKNIQLSHDWGNHHEIWDTNLNKTINQQRFVGTRKLVLDEDDVSMISNDQFPADRFSHVEILRIEGFVGEGGTLPCQFDGAQGVPV 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4334g00010 1362 Gene3D - 314 405 IPR042197 -
Pral4334g00010 1362 SMART AAA_5 176 314 IPR003593 GO:0016887
Pral4334g00010 1362 Pfam NB-ARC domain 163 402 IPR002182 GO:0043531
Pral4334g00010 1362 Gene3D Ribonuclease Inhibitor 737 936 IPR032675 -
Pral4334g00010 1362 Gene3D Ribonuclease Inhibitor 1062 1291 IPR032675 -
Pral4334g00010 1362 Gene3D Ribonuclease Inhibitor 937 1050 IPR032675 -
Pral4334g00010 1362 SUPERFAMILY L domain-like 1069 1284 - -
Pral4334g00010 1362 Gene3D Ribonuclease Inhibitor 476 713 IPR032675 -
Pral4334g00010 1362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 413 IPR027417 -
Pral4334g00010 1362 Gene3D - 134 313 IPR027417 -
Pral4334g00010 1362 Pfam Leucine rich repeat 580 634 IPR001611 GO:0005515
Pral4334g00010 1362 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 875 1040 - -
Pral4334g00010 1362 Coils Coil 37 71 - -
Pral4334g00010 1362 PRINTS Disease resistance protein signature 249 263 - -
Pral4334g00010 1362 PRINTS Disease resistance protein signature 350 364 - -
Pral4334g00010 1362 PRINTS Disease resistance protein signature 179 194 - -
Pral4334g00010 1362 PRINTS Disease resistance protein signature 621 637 - -
Pral4334g00010 1362 SUPERFAMILY L domain-like 474 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4334g00010 Pral-Chr4334 223315 232058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4334g00010 177 641 WRKY Transcription Factor Family AT5G45050 23.608 4.23e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4334g00010 - - pcin:129285257 952.584