Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4334g00008 ATGGATACTGTTACTTGCGGTTTGGTTGAGAAGTTCCGAGACGTAGTGCTCGACCTAACTTGGGAGCAGCTTCTTTATCTCATTCATTATCGCAGAAACATTGAGCACTTCAATGAACTACTTGAGGAACTCACCCTTAGAAGATGCTCCATACAACATGAAATAGATCGGGCTACAAACAATGTAGAACAAATTAAAGAGGAAGTTCGTCATTGGTTGGCCAAAGTAGATGAGATATCAGAGACAGGACGAAAGCTTCAAGAAAAGAGTCAGGTACAAACAGAGTGTAGCATAACTTCATGTCCCAACCCTTGGCTACGCTATAAACTAGGCAAAAAGGCAAAGGAGATTGCGAAAGAAGTTGTTGAAATTTGTGGGAAGGGAAACTTTCATGGAGTTTCATATCGTGTTCCTCCGCTGTCAACGGCAGAATTAACCAACAGAGACAGCAATGAAGGGATTGATTCAAGAGTACCAATTATGAATCAAATAATGGAGGCATTACGGAATCCAAGTGTTAATATGATCGGATTGTGTGGGCTTGGGGGTGTTGGCAAGACCACCATAGCCAGAGAGGTTGAAAAGAAGGTGAAGAATCAAAAGATGTTTGAAAAGGTGATCATGGCAACTGTTTCCATAGAATTGAACATTGAGAAGATTCAAGGCCAGATTGCTGATAAGCTGGCTATGCAACTCAGTGAAAGAACTGAAGATGTCAGAGCTTCTCGTTTGTGGGAGAGGTTGAACAAAGAGAAGAATATGCTCCTAATATTGGATGACCTTTGGGAGGAACTTGATTTGCGCAAAGTTGGAATTCCCTTTGTTGATGTTGAAAATTATAGCAGTAAGAATGAAGGCTGCAAAATTTTACTAACTTCAAGGAATAAAAGGCTGCTGTCAGATCTCATGAAATGTCAAGAAATTATCGAAGTGGGTGTTTTGTCAAAGAATGAAGCATGGGAGTTGTTCAAGAGGATTGCCGAATTTTCTATTGAATCAGGAAATCCTGATTTGAAACCTATAGCGGATGAGATTGTTCAAAAGTGCGGAGGCCTGCCACTAGCGATTGCTACAGCTGCCAAGGCATTAAGGGGAAAAAATCTAGATGAGTGGAAAGATTACCTGGCACGATGGAAAAATCATTTAAGGCGAAGTGACACAGGAATCAAAGAGGTGGATGCCTCTTTGAAATTGAGCTATGATCCTCTAAGCCAAGAGAAAAAAACTATTTTCTTACTTGCTGCCATGTTAACCCATGATCCCTCAATTGAAGACCTGCTCATGTACTCTGTGGGTTTAGATATTTTTCAAGGCATAGAGAACATGGAACAAGCCTATGTTGGAATCTCTGCTATTGTGAGTAAGCTAAAATCATTAAACTTATTTATGGATAGCATTTCTAGTCATCATGTTACAATCCATGACGTCTTTCGAGAAATTGCATTAAATACTGCATCCCGTGAATTACATGCATTCATTTTGAGGCATGAAAGCTCGAGAGAATGGCAAGACGAAGATGAGCTAGAACGCTACAAGGGAATTTCCTTGCAAGAAAGTGAGATCAGTGTTGACCTAAGAGAAGAGTTGCATGCTCCAACATTAGAATTCTTTCTACTGCACAACACAAAACGTGACTTGACCATACCCAACATGTTTTTCAAATCTTCGAAAAAGCTAAAACTGTTGGCATTTACCAATGTGCATTTTTCGTCACTACCATCACTCAGTTTCCTACTAAAACTAAAAACATTGTGTCTGCACTCTTGTTTTCTAGAAGATATAACTGAGGTCACAAGGTTGAAGAATTTAAAAGTGTTGAGTCTTGCTTCCTCTAAGGTTCAACAGTTACCAATTGAATTAGCAATGTTGACTTCTTTACAAATATTGAATTTGTCCCACTGCTTCGAACTCAAAGTGATTCCACCAAATGTCCTATCTAGCTTGAAAAAATTGGAGGTTTTGTTAATGGAAAGCAGCTTTGGCGAGTGGAAAGTTGAAGGATCTTGTGAAGTTGATGAAAATGCAAGTCTTGACGAATTAAAGGATTTGCCAATCTCTTCTCTTGATATTCGTATTCCTAATGTCTCTATGTGTCCGGAGCACTTGTTCTTAGATATGAATTTGAAGAGATGCCGAATACTCATTGGAAAACATTGGAACTGGCGGGGAGGCAGTCATGAAAGTTCAAAGATATTGAAAATTGAGCTTGAGGGTAATATCCATTTGAAGCCGGGGGTTCGAAAGTTGATGGAAGGAGTTGAAGATTTGTATTTATATGGATCTAATGGGCTTGAAAATGTTCTTCAGGGTAATGATGGAGGAGGGTTTCCACACTTAAGGCATCTTCAGATCAATGGTAACAATACTATTAGACTGAACTCAGGACATCATGAAGCTGTAACAAATAACATATCCAATAACACGTCCGTGTCACTTTTGAACAAGGTGTTGCTTCCAAAATTAGAGATATTGCGATTATCTAACTCAATCGGTTTGATTCCATTGATATGGGAGGACCAACTTTCACACAACTCATTTAGGAACTTGAAAACATTGTTTGTGAAAAGTTGTGGCTTTGTGAAATTGGTGCCCCTTCATGTGCTGAAATCTTTAAACAACTTGGAAGAACTAGAAGTTAGGGACTGTGACACGTTGGAGTTGGTGTTTGATTTTGAAGACTTGAATGATTATAAAGAGGCGGAGTCATCATCAGTGATTGTGCCACTGAAAAAGTTAACGCTTTATACATTGCAAAAATTGAAGAATGTATGGAGCAATCACTATAAAGGAGACGTCTCCTTCCCAAGTCTAAGGAGCGTGCATGTTTCCTGTTGTGAAAGCCTCGCTAGTCTGTTTCCTGCATCTATAGCCAAAGGCATGCTTTGTGATCTTGAAGAGCTTCGAATAAGAGATTGTGGTATAGAGGTGATTGTTGCAAAAGATCAAGTTTCAGAATCTGTTGCTCCTCTGTTAGAGTTTCCCAGGTTGACTTTCCTTGAGCTTTCTTCGCTTAAAAAGTTGAGGAATTTCTATCCGCAGAGACACACATTAGAATGGCCACATCTTTATCGATTATCTATTGAAGGTTGTGATGAGTTGGAGTTATTTGAAAAGGAAGCCTCAAGTTCATTAGAAATACACGAGGAAGGGAGCTCATTAGACTCAAAATATCCTGTACTGTTCCAATGCAAGGTCACTCATAATTTGGAGGAGTTGACATTACGGGGTAAAGGAGCTGAGATGATAGGAAGTGGCCAGCTTTCCATGTACCACTTCCCCAAAGTAAAACTGCTTCATCTACATGTCAGTTATAAAGCAACGACTATTTCGTACAAACTGTTGAAGAGCTTTCCAAACTTAGCAAAGCTGACACTGGGGGGTCACATTGAGAAGGCTTCTGGAGGGGATGATGTTCCTCTTCCAATAAAATTGACTCTCAACTATATTTCCAAAATCACAAGCTTGGTACCACTCTTAGTTTCTTCACCAAATCTCACACATCTCCACGTGGAATGTTGTTATGAGTTGACCACTTTGATGACGTCATCAGTTGCTCGAAGCTTGGTCCATCTCACAAGTCTCTCAATTAGAAGCTGCTCTAAAATAAAGGAAATTATATGGAAGCAGGAAGGAGTGGATGATGATGATGAGGAAGCCGCTTTCAGCAAGTTGCAGTATTTGAAACTTGAACACTTACCAAGATTGAAGAGATTTTGCGGCTACAATTATACTTTCAGGTTTCCATTATTGGATCAGGTGATCATAACAAAATGTCCGAAATTCAAAGTATTCTCTCCAGGGCTCATTGATACACCATCTCTTAAAAGCGTTCTACTGGAACATCATGAAATTTGGGACACCAATGTTAACAAAACATTCTACCAACAGAGATTTGTGGCATCAAGAGAGATGGTGTTAGATGAGGATGATATTAGCATGATAAGGAATGACCAATTTCCAGCCAACTGTCTTGCTCAAGTGGAAATTCTGCGCATAGAAGGATTTGATGATGAAGGGGCAACATTTCCGCATACATTGCTTGAAAGATTTCCGCGGCTGTCTGAGCTTCGTGTGAAGGATAGTTCTTTCGAGGAGATATTCCCATCGCCAATTGTCCATCAAATTCAACAACTTCATAATTTGAAAGTGTTGAAGGTGTTCCGATGTCATCAGCTCATCTATTTAATGACAAATTCAGCCGCCAAAAGTTTGGTGAATCTTGAAACATTGGAAATAGATGATTGTGAAAAGATGGAGAAAATTGTAAAGAATGAGAATAATGACGATATGGAAGGTGGAATCACGTTCAGTGCGTTGAGAAGATTAAAACTCAAGATTCTCCCAAGATTGAAAGCAGAAGAGCATAAAACGGATTTCAACACTGAAGACCCAGCAACAAATAATCACAAGGTGTCATTCCCACAGTTAGAGGTATTAAGATTAGAGTCTTTAGACAGTCTGATTCCACCGATATGGGATGACAAACTTTCACACAACTCGTTTAGCAACTTGAAAACATTGACTGTGTGGTGGTGTCGCTTTGTGAAATTGATACCCCTTCATGTGCTGAAATCTTTAAACAACTTGGAAGAACTGGGAGTCTCAAGGTGTGACATGCTAGAGACGGTGTTTGATTTTGAAGATTTAAATGATTATAAGGAGATGGTGTCATCATCAGTGAGTGTGCCATTGAAAAAGTTAAGGCTACAATATTTGCCAAAATTGAAGAATGTGTTGGGCAATAATGACTGCCAAGGAGAAATAAACTTAGTTTCTTCACTAGATGGTTCATGCCATCAAATAGAAGAACTTATGACGAAACAGAAAAAAGAGGATAATGAGGACAAGACAATCATTTTCAGCAAACTGGAGTTTTTGGAACTTGATGGATTACCAAGATTGAAGAGATTTTGCAACCAATATTATATTTTCAAGTTTCCATTATTACAATGTGCCATCGTAACAGAGTGCCCTCAACTCACAATATTCTGTTCTGGAGCCATTCATGCCCCGCTGCTTCAAAAGGTTCAAGTGACGACTCCATATGGACCTCACATAGATATTTGGATGACTGATCTTAATGTCACCATCCAACATCAGTTTACTATTCAAGAGGTAATTTCCACAACCAAAAGCATGGCTTTAAATGCAGACAATATCATGATGATAAGGGATGTCTTTCCTACAGTGAGAACTCTTTATGTAGAAAGTTTCAAGGATGAAGGTGTAACCTTTCCCCATAGCTCCCTTGAAAGATTTCCCATGTTGGAAAAGCTTTATGTGGAGCATAGTTCCTTTGAGGAGATATTCCCCCCACAAGATGAGATTATCGATTTTATGGGGAAAATCCCACCATTTGAGGAATTATACATTGCCTATTTGGATCAACTCAAGAACATATGGAAGGACGACTCTCAGCTACCACCAATTCATCAAGACTTGATAAAATGCCTGGAAGTTGAAAGTTGTCATAACTTGGTCAAGTTGGCACCATCCTCTGCTTCATTTCAAAATTTGCGGAAGCTGTCTATATCTGGATGTCATCAACTTGTCTATTTGGTGACAAGTGCAACTGCTAAAAGCTTGGTGAGTCTTGAATGGTTGGGGATAAAAGATTGCAAAAAAATGGAGGAAATTGTATTGAATGAGAACAATGAAGGTGTAGAAGGTGGAATCACTCTCAACCAATTACAACGGATTGAACTTACTGATATGCCAAGCTTGAAGATGTTCTCTTCACAAAGTCAGACATTTGAATTCCCTAAATTAGAAGAGGTAGAAATAACTGGATGTCCTGAAATGAAGATGTTTTCTTTAGGATTGTTGGAAACACCAGAGTTGTCTAGAGTAAAAATAGAAGAGCATGAGATGAAGTGGAAGGATAAAGGGGACCTTAACAAAACAGTAGAAATGCTATCCTCAGCAAAGGATAGTGTTAATATATAG 5946 0.391 MDTVTCGLVEKFRDVVLDLTWEQLLYLIHYRRNIEHFNELLEELTLRRCSIQHEIDRATNNVEQIKEEVRHWLAKVDEISETGRKLQEKSQVQTECSITSCPNPWLRYKLGKKAKEIAKEVVEICGKGNFHGVSYRVPPLSTAELTNRDSNEGIDSRVPIMNQIMEALRNPSVNMIGLCGLGGVGKTTIAREVEKKVKNQKMFEKVIMATVSIELNIEKIQGQIADKLAMQLSERTEDVRASRLWERLNKEKNMLLILDDLWEELDLRKVGIPFVDVENYSSKNEGCKILLTSRNKRLLSDLMKCQEIIEVGVLSKNEAWELFKRIAEFSIESGNPDLKPIADEIVQKCGGLPLAIATAAKALRGKNLDEWKDYLARWKNHLRRSDTGIKEVDASLKLSYDPLSQEKKTIFLLAAMLTHDPSIEDLLMYSVGLDIFQGIENMEQAYVGISAIVSKLKSLNLFMDSISSHHVTIHDVFREIALNTASRELHAFILRHESSREWQDEDELERYKGISLQESEISVDLREELHAPTLEFFLLHNTKRDLTIPNMFFKSSKKLKLLAFTNVHFSSLPSLSFLLKLKTLCLHSCFLEDITEVTRLKNLKVLSLASSKVQQLPIELAMLTSLQILNLSHCFELKVIPPNVLSSLKKLEVLLMESSFGEWKVEGSCEVDENASLDELKDLPISSLDIRIPNVSMCPEHLFLDMNLKRCRILIGKHWNWRGGSHESSKILKIELEGNIHLKPGVRKLMEGVEDLYLYGSNGLENVLQGNDGGGFPHLRHLQINGNNTIRLNSGHHEAVTNNISNNTSVSLLNKVLLPKLEILRLSNSIGLIPLIWEDQLSHNSFRNLKTLFVKSCGFVKLVPLHVLKSLNNLEELEVRDCDTLELVFDFEDLNDYKEAESSSVIVPLKKLTLYTLQKLKNVWSNHYKGDVSFPSLRSVHVSCCESLASLFPASIAKGMLCDLEELRIRDCGIEVIVAKDQVSESVAPLLEFPRLTFLELSSLKKLRNFYPQRHTLEWPHLYRLSIEGCDELELFEKEASSSLEIHEEGSSLDSKYPVLFQCKVTHNLEELTLRGKGAEMIGSGQLSMYHFPKVKLLHLHVSYKATTISYKLLKSFPNLAKLTLGGHIEKASGGDDVPLPIKLTLNYISKITSLVPLLVSSPNLTHLHVECCYELTTLMTSSVARSLVHLTSLSIRSCSKIKEIIWKQEGVDDDDEEAAFSKLQYLKLEHLPRLKRFCGYNYTFRFPLLDQVIITKCPKFKVFSPGLIDTPSLKSVLLEHHEIWDTNVNKTFYQQRFVASREMVLDEDDISMIRNDQFPANCLAQVEILRIEGFDDEGATFPHTLLERFPRLSELRVKDSSFEEIFPSPIVHQIQQLHNLKVLKVFRCHQLIYLMTNSAAKSLVNLETLEIDDCEKMEKIVKNENNDDMEGGITFSALRRLKLKILPRLKAEEHKTDFNTEDPATNNHKVSFPQLEVLRLESLDSLIPPIWDDKLSHNSFSNLKTLTVWWCRFVKLIPLHVLKSLNNLEELGVSRCDMLETVFDFEDLNDYKEMVSSSVSVPLKKLRLQYLPKLKNVLGNNDCQGEINLVSSLDGSCHQIEELMTKQKKEDNEDKTIIFSKLEFLELDGLPRLKRFCNQYYIFKFPLLQCAIVTECPQLTIFCSGAIHAPLLQKVQVTTPYGPHIDIWMTDLNVTIQHQFTIQEVISTTKSMALNADNIMMIRDVFPTVRTLYVESFKDEGVTFPHSSLERFPMLEKLYVEHSSFEEIFPPQDEIIDFMGKIPPFEELYIAYLDQLKNIWKDDSQLPPIHQDLIKCLEVESCHNLVKLAPSSASFQNLRKLSISGCHQLVYLVTSATAKSLVSLEWLGIKDCKKMEEIVLNENNEGVEGGITLNQLQRIELTDMPSLKMFSSQSQTFEFPKLEEVEITGCPEMKMFSLGLLETPELSRVKIEEHEMKWKDKGDLNKTVEMLSSAKDSVNI 1981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4334g00008 1981 Gene3D Ribonuclease Inhibitor 448 690 IPR032675 -
Pral4334g00008 1981 PRINTS Disease resistance protein signature 175 190 - -
Pral4334g00008 1981 PRINTS Disease resistance protein signature 248 262 - -
Pral4334g00008 1981 PRINTS Disease resistance protein signature 621 637 - -
Pral4334g00008 1981 PRINTS Disease resistance protein signature 349 363 - -
Pral4334g00008 1981 Gene3D Ribonuclease Inhibitor 931 1130 IPR032675 -
Pral4334g00008 1981 Gene3D Ribonuclease Inhibitor 1714 1857 IPR032675 -
Pral4334g00008 1981 Gene3D Ribonuclease Inhibitor 1858 1967 IPR032675 -
Pral4334g00008 1981 SUPERFAMILY RNI-like 1143 1544 - -
Pral4334g00008 1981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 412 IPR027417 -
Pral4334g00008 1981 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1721 1947 - -
Pral4334g00008 1981 SUPERFAMILY L domain-like 1716 1944 - -
Pral4334g00008 1981 Coils Coil 55 82 - -
Pral4334g00008 1981 Gene3D Ribonuclease Inhibitor 727 930 IPR032675 -
Pral4334g00008 1981 Gene3D Ribonuclease Inhibitor 1141 1434 IPR032675 -
Pral4334g00008 1981 Gene3D Ribonuclease Inhibitor 1436 1679 IPR032675 -
Pral4334g00008 1981 SUPERFAMILY L domain-like 1321 1664 - -
Pral4334g00008 1981 FunFam Probable disease resistance protein At1g61300 139 306 - -
Pral4334g00008 1981 Coils Coil 27 47 - -
Pral4334g00008 1981 SMART AAA_5 172 314 IPR003593 GO:0016887
Pral4334g00008 1981 Pfam NB-ARC domain 161 401 IPR002182 GO:0043531
Pral4334g00008 1981 SUPERFAMILY L domain-like 508 1038 - -
Pral4334g00008 1981 Gene3D - 313 404 IPR042197 -
Pral4334g00008 1981 Gene3D - 138 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4334g00008 Pral-Chr4334 188758 199231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4334g00008 173 644 WRKY Transcription Factor Family AT5G45050 25.277 4.50e-15 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4334g00008 - - pcin:129285257 991.875