Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4334g00007 ATGGATATCACTTGCGGAACGTTGAGTAGTTTGGTTGACAAGTTCCGGGATCTAGTGATCGATCTAACTTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAAAAATATTGAGGAGCTCAATAAACGACTTGAGGAACTCACCCTTGAAAGAAGCTCCAAACAACAACAAATAGATAATGCTAGAAAAAATTTAGAACAAATTGAAGAGAAAGTTCAGCATTGGCTGCGCAAAGTAGATGAGATTTTAACGCAAACACAAATGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGAGTGTAGCGTAACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAGAGCAGAGGCAATGGCACAGCAAGTTGTTGAAATCTATGGGAAGAGAAACTTTGATAGGGTTTCACATCCTGTTCCTCCCCCATCGATGCCAGAATTACTCAACAGAGAAAGCAATGAAGGGATTGGTTCTAGAACGCAAATTGTGAATCAAATTATGGAGCTCTTACATAATCCTAGTGTTAATATTGTCGGATTGTGTGGGCTTGGCGGTGTTGGCAAGACCACTATAGCTAAAGAGGTGGCAGAGACGGCGAAGAATCAAAACATGTTTAAAAAGGTGATCATGGCAACTGTTTCTAATGAATTGGACGTTAAGAAGATTCAAGGCCAGATTGCAGAGAAGCTGGGTTTTCAACTCAATGAAAAATTTGAAGTAAGAGCTTATCGTCTATGTGAAAGGTTGAAGCAAGAGGAGAATATGCTCCTAATATTGGATGATCTTTGGAAGGAACTTGATTTCGGCGAAGTTGGAATTCCCTTTGTTAATGTTGGAAGTTCTAGCAAAAAGAATGAATGCTGCAAAATTTTACTGACTTCAAGGAATAAGAGTTTGCTGTCAAATGGCATGAAATGTCAAGAAATTATCGAAGTGGATGTTTTGTCAGAGGATGAAGCATTAGAGTTGTTCAAGAGGATTTCTGAACTTCCTATTGACTCAAGCACTCCTGACAACTTGATATGTACAGCCTATCAGATTGTTCGAAAGTGTCATGGCTTGACATTAGCGATTGCAACAGCTGCCAAGGCATTAAGGGGAACAAATCTAGATGAGTGGCAAGATTTCTGTAAACGATTGAATCATCCTTTAAGGAGAAACATCACAGGAATTAAAGAGGTGGATGCGATATTGAAGTCGAGTTATGATTGTCTAAGCTCAGAGAAAAAACGTATCTTCTTGCTCTCTGCCATGCTGTCCCATGATCCCTCAATTGATGACCTGCTCATGTACTCTATGGGGTTAGATATTCTTGAGAGCATAGAAAACATAGAAGATGCCCACATTGGAGTCTCTGCTGCCGTAAGCAAGCTAAAATCATTAAACTTATTTCTTGATAGCTTTTCTAGTCATTACTTCACAATACATGACGTCTTTCGAGATTTTGCAATATCGATAGCAACCAATGAATTAAATGCATTCATTGTGAGGCATGGAAGCTTGAAAGAATGGCCTGAAAAAAATAAGCTTGAAGACTACAAGGGAATTTGCTTGCAAAAGAGTGACATCAGTGGCCTTCCAGAAGAGCTTCATGGTCCAAGATTAGAATTCTTTCTGCTAGACAGCACAAAATGTGATTTGGCCATACCTAGGATGTTTTTCAAATCATCAAAGGAGCTGAAAGTGTTGGCATTTACCAATATGCATATTTCGTCACTACCATCACTCATGTTCCTGCAAAAACTAAAAACATTGCGTCTCCACTCTTGTTTGCTAGAAGACATAATTGAGGTTGGAAGCTTGAAGAAGTTAGAAGTCCTAAGTCTTGCTTACTCTGAAATTCAACAACTACCTATTGAATTGGCAGAGTTAACTTCTTTACAAATGTTGAATTTAGCCCATTGCTCCAAGCTCAAAGTGATTCCACCAAAACTGCTATCTAGCTTCAAAAAATTGGGGGTTTTGCTTATGGCAAATAGCTTTCACCAGTGGAAAGTTGAAGGATCTACTGAAGCTAATGAAAACGCGAGTCTTGACGAGTTGAAGGGCTTGCCAATCTCACTGGAAATGGTGGATGGTCAGCTATAA 2094 0.3935 MDITCGTLSSLVDKFRDLVIDLTWEQLRYLFQYHKNIEELNKRLEELTLERSSKQQQIDNARKNLEQIEEKVQHWLRKVDEILTQTQMFHEEESQAKTECSVTSCPNLWLRYKLSKRAEAMAQQVVEIYGKRNFDRVSHPVPPPSMPELLNRESNEGIGSRTQIVNQIMELLHNPSVNIVGLCGLGGVGKTTIAKEVAETAKNQNMFKKVIMATVSNELDVKKIQGQIAEKLGFQLNEKFEVRAYRLCERLKQEENMLLILDDLWKELDFGEVGIPFVNVGSSSKKNECCKILLTSRNKSLLSNGMKCQEIIEVDVLSEDEALELFKRISELPIDSSTPDNLICTAYQIVRKCHGLTLAIATAAKALRGTNLDEWQDFCKRLNHPLRRNITGIKEVDAILKSSYDCLSSEKKRIFLLSAMLSHDPSIDDLLMYSMGLDILESIENIEDAHIGVSAAVSKLKSLNLFLDSFSSHYFTIHDVFRDFAISIATNELNAFIVRHGSLKEWPEKNKLEDYKGICLQKSDISGLPEELHGPRLEFFLLDSTKCDLAIPRMFFKSSKELKVLAFTNMHISSLPSLMFLQKLKTLRLHSCLLEDIIEVGSLKKLEVLSLAYSEIQQLPIELAELTSLQMLNLAHCSKLKVIPPKLLSSFKKLGVLLMANSFHQWKVEGSTEANENASLDELKGLPISLEMVDGQL 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4334g00007 697 SUPERFAMILY L domain-like 477 664 - -
Pral4334g00007 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 416 IPR027417 -
Pral4334g00007 697 Coils Coil 30 85 - -
Pral4334g00007 697 Gene3D - 317 408 IPR042197 -
Pral4334g00007 697 SMART AAA_5 176 317 IPR003593 GO:0016887
Pral4334g00007 697 Pfam NB-ARC domain 162 405 IPR002182 GO:0043531
Pral4334g00007 697 Gene3D - 147 316 IPR027417 -
Pral4334g00007 697 Gene3D Ribonuclease Inhibitor 482 693 IPR032675 -
Pral4334g00007 697 Gene3D - 28 128 - -
Pral4334g00007 697 PRINTS Disease resistance protein signature 179 194 - -
Pral4334g00007 697 PRINTS Disease resistance protein signature 624 640 - -
Pral4334g00007 697 PRINTS Disease resistance protein signature 251 265 - -
Pral4334g00007 697 PRINTS Disease resistance protein signature 353 367 - -
Pral4334g00007 697 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4334g00007 Pral-Chr4334 114728 116916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4334g00007 177 644 WRKY Transcription Factor Family AT5G45050 22.862 4.82e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4334g00007 - - pcin:129285257 774.622