Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4334g00002 ATGGATATTACTTGCGGAACATTGAGCAGTTTTGTTGACAAGTTCTGGGACCTAGTGCTGGACCCAACTTGCGAGCAGTTTCATCATCTGTCTCACTATCACAGAAACATTAAGCAGCTCAATGAACGACTTGTGGAACTCATCGATGAAAGAAGCTCCATAAAACATCAAATAGATGAGGCTACAAACAATGCAGAACCAATTGAAGACAAAGTTCTTCATTGGTTGCGCAAAGTAGATGGGATTTCAGAACAAATTCAAAAGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGGGTGTAGCGTAACTTCATGTCCCAACCCGTGGCTACGCTATAAACTAAGCAAAAGAGCAAAGGCAATGGCGCAAGAAGTTGTTGAAATTTGTGGAAAGGGAAACTTCAATACAGTTTCATATCGCGTTCTTCCGCCATCCATGCCAGAATTATTCAACAGAGAAAGCAATGCAGGGATTGGTTCAAGAGTGCAAATTGTGAATCAAATTATAGAGGAATTACGGAATCCAAGTGTTAATATGATTGGATTGTGTGGGCTTGGTGGTGTTGGCAAGACCACTATAGCTAAAGAGGTAGCAAAGAGTCAAAACATGTTTGAAAAGGTAATCTTAGCAATTGTTTCTCAAGAATTGAATGTTGAGAAGATTCAAGGCCAGATTGCTGTGAAACTGGGTATGCAACTCAATGAAACATTTGAAGAAGTAAGAGCTTGTCATCTGTATGAGAGGTTGAAGCAAGAGAAGAATATGCTCCTAATATTGGATGATCTCTGGGAGGAACTTGATTTTGGCAAAGTTGGAATTCCTTTTGTTGATGTTGAGAATTATAACAAAAAGAATGAAGGCTGCAAAATTTTACTAACTTCAAGGAACGAAACGCTGCTGTCGAACCGCATGAAATGTCAAAAAATTATCAAGGTGGGTTTTTTGTCAGAGGATGAAGCATGGGAGTTGTTCAAGAGGATTGCTGAATTGTCTATTGACTCAAGTAGTCCTGACCTGATATCTATAGCTAATGCGATTGTTCAAAAGTGCAGAGGCTTGCCACTAGCGATTGCTACAGCTGCCAAAGAATTGCTAGGAAAAAATCCAGATGACTGGAAAGATTACCTTGCCCGATTGAATAATCCTTTAAGGAGAAACATCACAGGAATTAGAGAGGTAGATACCATTTTGATATCAAGCTATGATCGTCTAAGCTCATCAGAGAACAAGCATATTTTCTTACTTGGTGCCATGTTGTCCCATGATCCCTCAATCGAAGACCTTCTCATGCACTCTGTGGGGTTAGATTTTCTGAAACACACACAAAACATGGAGGAAGCCCACAATGGAATCTCTGCTATTCTGAAAGTGATTCCCCCGAAACTTCTATCTTGCTTCAAAAAATTGGAAGTGTTGCACATGGGAAACAGCTTTAACCAATGGAAAATTGAAGAATCTAGTGAAGCTAATGAAAATGCAAGTCTTGATGAGTTAAAGGATTTGCCCATCTCTTCTCTCGATATTCATATTCCTAATGTCTCTATGTTGCCGGAGACTTTGTTCTTAGATTTGAATTTGAAGAGATATAGAATATTCATTGGAGAGCTTTGGAAATGGCAAGGCAATCATGAAACTTCAAAGATATTAAAACTTGAGCTAGAGGGTAGTATCCATTTGAAGCCTGGGGTACGAAAGTTGATAACAGGAGCTGAAGATTTGTATTTATATGGATCTAGTGGGCTTGAAAATGTTCTTCATGGTCACGATGGAAGAGCATTTCCACATTTAAGGCATTTTCAAATTGAAAGTAATGATACTATTAGATACATTGTTTTGAACTCAGCACATCTTGAAGCTGCAACAAATAACATATCCAGCAAAATATCTGAGTTACTTTTCAACAAGGTGTTACTTCCAAAATTAGAGAGGTTGGAATTGTCCAATTCAATCAATTTGATTCCAACGATATGGGATGACCAACTTTCACACACCTCATTTAGCAATTTGAAAACATTGATTGTGAAAAACTGTGGCTTTGTGAAATTAGTGCCCCTTTGTGTGCTAAGATCTTTATACAAGTTGGAAGAACTGGAAGTCAGGAATTGTCACATGTTGGAGATGGTGCTTGATTTTGAAGATTTGAACGAATATAGAGAGACGGTGTCATTATCAATCCAGGTTGTGCCACTGAAGAAGTTAACGCTACATGGCTTGCCAAAATTGAAGAATGTGTGGAGCAATCACTACCAAGGAAATGTCTCCTTCCCATGTCTAAGGAATGTCAATGTTTTTAGATGTGAAAGTCTCACAAGTATATTTCCTGCATCCATAGCCAAAGGCATGCTTTGTGATCTTGAAGAGCTTCGAATAGATGATTGTGCTTTGTTGGCTTGA 2394 0.386 MDITCGTLSSFVDKFWDLVLDPTCEQFHHLSHYHRNIKQLNERLVELIDERSSIKHQIDEATNNAEPIEDKVLHWLRKVDGISEQIQKFHEEESQAKTGCSVTSCPNPWLRYKLSKRAKAMAQEVVEICGKGNFNTVSYRVLPPSMPELFNRESNAGIGSRVQIVNQIIEELRNPSVNMIGLCGLGGVGKTTIAKEVAKSQNMFEKVILAIVSQELNVEKIQGQIAVKLGMQLNETFEEVRACHLYERLKQEKNMLLILDDLWEELDFGKVGIPFVDVENYNKKNEGCKILLTSRNETLLSNRMKCQKIIKVGFLSEDEAWELFKRIAELSIDSSSPDLISIANAIVQKCRGLPLAIATAAKELLGKNPDDWKDYLARLNNPLRRNITGIREVDTILISSYDRLSSSENKHIFLLGAMLSHDPSIEDLLMHSVGLDFLKHTQNMEEAHNGISAILKVIPPKLLSCFKKLEVLHMGNSFNQWKIEESSEANENASLDELKDLPISSLDIHIPNVSMLPETLFLDLNLKRYRIFIGELWKWQGNHETSKILKLELEGSIHLKPGVRKLITGAEDLYLYGSSGLENVLHGHDGRAFPHLRHFQIESNDTIRYIVLNSAHLEAATNNISSKISELLFNKVLLPKLERLELSNSINLIPTIWDDQLSHTSFSNLKTLIVKNCGFVKLVPLCVLRSLYKLEELEVRNCHMLEMVLDFEDLNEYRETVSLSIQVVPLKKLTLHGLPKLKNVWSNHYQGNVSFPCLRNVNVFRCESLTSIFPASIAKGMLCDLEELRIDDCALLA 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4334g00002 797 Coils Coil 796 797 - -
Pral4334g00002 797 SMART AAA_5 176 314 IPR003593 GO:0016887
Pral4334g00002 797 PRINTS Disease resistance protein signature 350 364 - -
Pral4334g00002 797 PRINTS Disease resistance protein signature 179 194 - -
Pral4334g00002 797 PRINTS Disease resistance protein signature 636 652 - -
Pral4334g00002 797 PRINTS Disease resistance protein signature 249 263 - -
Pral4334g00002 797 Coils Coil 30 64 - -
Pral4334g00002 797 Gene3D - 138 312 IPR027417 -
Pral4334g00002 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 414 IPR027417 -
Pral4334g00002 797 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 457 709 - -
Pral4334g00002 797 Gene3D - 314 405 IPR042197 -
Pral4334g00002 797 Gene3D Ribonuclease Inhibitor 419 797 IPR032675 -
Pral4334g00002 797 Pfam NB-ARC domain 163 402 IPR002182 GO:0043531
Pral4334g00002 797 SUPERFAMILY RNI-like 438 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4334g00002 Pral-Chr4334 40248 48136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4334g00002 157 440 WRKY Transcription Factor Family AT5G45050 25.170 2.93e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4334g00002 - - pcin:129285257 465.692