Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4334g00001 ATGGATATCACTTGCGGAACATTGAGTAGTTTGGTTGACAAGTTCCGGGATCTAGTGATCGATCTAACCTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAGAAACATTGAGGAGCTCAATGAACGACTTGAGGAACTCACCCTTGAAAGAAGCTCCAAACAACAGCAAATAGATAATGCTAAAAAAAATTTAGAACAAATTGAAGAGAAAGTTGAGCATTGGTTGGGCAAAGTAGATGAGATTTTAGAGCAAACACAAATGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGAGTGTAGCGTAACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAGAGCAAAGGCAATGGCACAACAAGTTGTTGAAATCTATGGAAAGGGAAACTTTGATAGATTTTCATATCCTATTCCTCCCGCATCGATGCCAGAGGTACTCATCAGAGAAAGCAATGAAGGGATTGGTTCAAGAACGCAAATTGTGAATCAAATTATGGAGCACTTACATAATCCTAGTGTTAGTATTGTTGGATTGTCTGGGCTTGGTGGTGTTGGCAAGACCACTATAGCTAAAGAGGTAGCAAAGAAGGCGAAGAATCAAACCATGTTTGAAAAGGTGATCATGGCAACTGTTTCTGAAGAATTGAACATTGAGAAGATTCAAGGCGAGATTGCAGAGAACCTGGCTTTCCAACTCAATGAAAAATCTGAAGGAGTAAGAGCTCGTCGTCTGTGTGAGAGGTTGAAGCTAGAGAAGAATATGCTCCTAATATTGGATGATCTTTGGGAGGAACTTGATTTGGGCAAAGTTGGAATTCCCTTTGTTGATGTTGGAAGTTATAGCAAAAAGAATGAAGGCTGCAAAATTTTACTAACTTCAAGGAATAAGATGCTGTTGTTAAACCGCATGAAATGTCAAGAAATTATCGAAGTGGATGTTTTGTCAGAGGATGAAGCATTAGAGTTGTTCAAGAGGACTTCTGAACTTCCTATTGACTCAAGCACTCCTGACAACTTGATATCTATAGCCTCTCAGATTGTTCGAAAGTGTCATGGCTTGACATTAGCGATTGCAACAGCTGCCAAGGCATTAAGGGGAAAAAATCTAGGTGAGTGGCAAGAATTCTACAAACGATTGAATCATCCTTTAAGGAGAAACATCACAGGAATTAAAGAGGTGGATGCGATATTGAAGTCGAGTTATGATTGTCTAAGCTCAGAGAAAAAACGTATGTTCTTGCTCTCCGCCATGCTGTCCCATGATCCCTCAATTGAGGACCTGCTCATGTACTCTATGGGGTTAGATATTCTTGACGGCATAGAAAACATAGAAGATGCCCACAGTGGAGTCTCTACTACCGTAGGTGATCTAAAATCATTAAACTTATTTCTTGATAGCTTTTCTAGTCACCGCTTTACAATACATGACGTCTTTCGAGATGTTGTATTATCGATCACACCCAATGAATTAAATGCATTCATTGTGAGGCATAGAAGCTTGAAAGAATGGCCAGACCAAAAAAAGCTCGAAGACTACAAGGGAATTTGCTTACAGAAGAGTGACATCAGTGACCTTCCAGAAGAGCTGCATGGTTCAAGATTAGAATTCTTTCTGCTAGACAGCACCGAACGTGATTTGGCCATACCTAAGATGTTTTTCAAATCATCAAAGGAGCTGAAAGTGTTGGCATTTACCAATGTAAATTTTTCATCACTACCATCGCTCATGTTCCTGCAAAAACTAAAAACATTGTGTCTCCACTCTTGTTTGCTAGAAGACATAATTGAGGTTAGAAGCTTGAAGAAGTTAAAAGTCCTAAGTCTTGCTTACTCTGAAATTCAACAACTACCTATTGAATTGGCAGATTTAACTTCTTTAGAAATGTTGAATTTAGCCCACTGCTCCAAGCTCAAAGTGATTCCACCAAAACTGCTATCTAGCTTCAAAAAATTGGGGGTTTTGCTTATGGCAAATAGCTTTCACCAGTGGAAAGTTGAAGGATCTACCGAAGCTAATGAAAACGCGAGTCTTGACGAGTTGAAGGGCTTGCCAATCTGTTCTCTAGATATTCATATTCCTAATGTCTCGATGTTGCCGGAGAATTTGTTCTTAGATATGAATTTGATGAGATACAAAATACTCATTGGGAAGCACTGGAAACGGTGGACGGTCAGCTATAAAACTTCAAACGTATTGAAACTTGAGCTTGAGAGTGATATCTATTTGAAGCCTGGGGTTCGAAAGTTGATGAAAGGAGCTGAAGATTTGTGTTTATATGGATCTAATGGGCTTGAAAATGTTCTACATGGTCATGATGGAAGATCATTTCTGCATTTAAGGCATCTTCAGATTGAAAGTAACGATACTATTGAGTCCATTGTTTGGAACTCAGCACATCATGAAGCAGCAACAAATAACATATCCAATAAAATGTCTGAGTCGCTTTTGAACAAGGTGTTGCTTCCAAAATTAGAGATATTGCGATTATCTAATTCAATCGGTTTGATTCCATTGATATGGGAGGACCAACTTTCACACAACTCATTTAGGAACTTGAAAACATTGTTTGTGAAAAGTTGTGGCTTTGTGAAATTGGTGCCCCTTCGTGTGCTGAAATCTTTAAACAACTTGGAAGAACTAGAAGTTAGGGACTGTGACACGTTGGAGTTGAATGTGTGGAGCAATCACTATAAAGGAGACGTCTCCTTCCCAAGTCTAAGGAGCGTGCATGTTTCCTATTGTGAAAGCCTCACTAGTCTGTTTCCTGCATCTATAGCCAAAGGCATGCTTCGTGATCTTGAAGAGCTTCGAATAAGTGATTGTGGTATAGAGGTGATTGTTGCAAAAGATCAAGTTTCAGAATCTGTTGCTCCTCTGTTAGAGTTTCCCAG 2903 0.3944 MDITCGTLSSLVDKFRDLVIDLTWEQLRYLFQYHRNIEELNERLEELTLERSSKQQQIDNAKKNLEQIEEKVEHWLGKVDEILEQTQMFHEEESQAKTECSVTSCPNLWLRYKLSKRAKAMAQQVVEIYGKGNFDRFSYPIPPASMPEVLIRESNEGIGSRTQIVNQIMEHLHNPSVSIVGLSGLGGVGKTTIAKEVAKKAKNQTMFEKVIMATVSEELNIEKIQGEIAENLAFQLNEKSEGVRARRLCERLKLEKNMLLILDDLWEELDLGKVGIPFVDVGSYSKKNEGCKILLTSRNKMLLLNRMKCQEIIEVDVLSEDEALELFKRTSELPIDSSTPDNLISIASQIVRKCHGLTLAIATAAKALRGKNLGEWQEFYKRLNHPLRRNITGIKEVDAILKSSYDCLSSEKKRMFLLSAMLSHDPSIEDLLMYSMGLDILDGIENIEDAHSGVSTTVGDLKSLNLFLDSFSSHRFTIHDVFRDVVLSITPNELNAFIVRHRSLKEWPDQKKLEDYKGICLQKSDISDLPEELHGSRLEFFLLDSTERDLAIPKMFFKSSKELKVLAFTNVNFSSLPSLMFLQKLKTLCLHSCLLEDIIEVRSLKKLKVLSLAYSEIQQLPIELADLTSLEMLNLAHCSKLKVIPPKLLSSFKKLGVLLMANSFHQWKVEGSTEANENASLDELKGLPICSLDIHIPNVSMLPENLFLDMNLMRYKILIGKHWKRWTVSYKTSNVLKLELESDIYLKPGVRKLMKGAEDLCLYGSNGLENVLHGHDGRSFLHLRHLQIESNDTIESIVWNSAHHEAATNNISNKMSESLLNKVLLPKLEILRLSNSIGLIPLIWEDQLSHNSFRNLKTLFVKSCGFVKLVPLRVLKSLNNLEELEVRDCDTLELNVWSNHYKGDVSFPSLRSVHVSYCESLTSLFPASIAKGMLRDLEELRISDCGIEVIVAKDQVSESVAPLLEFP 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4334g00001 967 Pfam NB-ARC domain 162 406 IPR002182 GO:0043531
Pral4334g00001 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 417 IPR027417 -
Pral4334g00001 967 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 893 - -
Pral4334g00001 967 Coils Coil 30 85 - -
Pral4334g00001 967 SUPERFAMILY L domain-like 478 950 - -
Pral4334g00001 967 Gene3D Ribonuclease Inhibitor 745 954 IPR032675 -
Pral4334g00001 967 SMART AAA_5 176 318 IPR003593 GO:0016887
Pral4334g00001 967 Gene3D - 318 409 IPR042197 -
Pral4334g00001 967 PRINTS Disease resistance protein signature 625 641 - -
Pral4334g00001 967 PRINTS Disease resistance protein signature 179 194 - -
Pral4334g00001 967 PRINTS Disease resistance protein signature 354 368 - -
Pral4334g00001 967 PRINTS Disease resistance protein signature 252 266 - -
Pral4334g00001 967 Gene3D Ribonuclease Inhibitor 477 715 IPR032675 -
Pral4334g00001 967 Gene3D - 146 317 IPR027417 -
Pral4334g00001 967 FunFam Probable disease resistance protein At1g61300 143 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4334g00001 Pral-Chr4334 563 5981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4334g00001 177 645 WRKY Transcription Factor Family AT5G45050 25.145 6.88e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4334g00001 - - pcin:129285257 874.004