Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4333g00028 ATGAGCTCTAATAACTTGCAGAAACTCAAATATGATAATAAACGCAAAGATGAAGAAGAAGCAGAAGATAACGTACTGTTTCATCAAAGCGAGACAATTCCGTTGTCATCGCCGCCGCCATATGGGTTCTCGGAGCCGCCGTGGCCCTCCCATTTTGTGGAGGAGGACAACAACGAGGAAGAAGTTGTGTATGCAGATAAGGTGAAAGTGCAGATATTTGACTTGGAGACTTCCTCTAACTCCACCTCCACCGTGGCTGTGCCGCCATTCTCGTGGCGCAAGCTGTGGCTGTTCACGGGGCCGGGGCTGCTGATGAGCGTGGCGTTTTTGGACCCTGGGAATTTGGAGGGTGATTTGCAGGCAGGAGCCATTGGAGGGTACTCATTGTTGTGGCTTTTGATGTGGACCACCGTCATGGGGCTGCTGATACAGCTGTTGTCGGCGAGGCTCGGGGTGGCGAGCGGGAGGCACTTGGCGGAGCTCTGCCGGGAAGAGTACACAAGGTGGGCGAGGTTGGTACTGTATGTGATGGCGGAAATGGCATTGATAGCTGCAGATATTCAAGAGGTTATTGGTAGTGCCATAGCCATCAAGATTTTAAGTCATGGCGTTTTCCCTATTTGGGCAGGAGTCGTAATTACAGCCCTGGATAGCTTTGTGTTCCTGTTTCTTGAGAACTATGGAGTAAGAAAGCTGGAAGGTGTTTTCGCAATTTTCGTAGGGACCATGGCCCTTTCGTTTGCTTGGATGTTCTTTGATACAAAGCCTAGTCCTAAACAACTTCTTATAGGTATTTTAGTCCCAAAAGTGAGCTCAAAAACGCTTCGTCAAGCTGTGGAACTTATAGGCTGTGTTATAACTCCACACAACGTATTTCTCCACTCAGCCCTAGTTCAATCCAGAAACATAGACATAAAAAACAAAGGCCAAGTCCAAGAGGCTCTAAACTACTACACAATCGAATCCACACTTGCACTTATCATCGCCTTCTTCATCAACCTCTCGGTCATGACGGTCTTTGCTAGGGTTTTCTACGACACAGAACAAGACGACGCCATCGGACTCGTAAACGCCGGCCAGTATCTGCAAGAGAAATATGGCGGAGGGTTCTTCCCCATACTGTATATTTGGGGAATAGGGTTGTTGGCTGCAGGACAAAGCAGTACTATTACCGGTACGTATGCTGGACAGTTTATTACAGAAGGGTTTCTGAAACTGCGTTTAAAGAAATGGTTAAGGGCTCTGATCACTAGAAGTCTGGCCATTGTTCCTACCATGATTGTTGCTGTTGTGTTTAATACTTCTGAAGGGTCTTTGGATACTTTGAATGAGTGGCTCAATGTGGTTCAGTCCATTCAGATTCCTTTTGCTCTCATCCCTCTTCTTACTTTGGTGTCTAAAGAGGAGGTCATGGGCACATTCAGAATTGGACCCGTCGTGGAGAAAGTGGCATGGACAGTGGCAGTGCTGGTAATTCTGGTATATGGATACATGTTGCTGGACTTCTTCCTATCAGAAGTGAAGGGAATTGTGTATGGTTTTGTGGTGTTCCTTTGTGCGGCTGCTTGGTTATCCTTTATAGCTTATTTGGTCCAACACAGTGGTGCCTTTTCTTCTTTCCTCCACACTTCTCCTCATTCCCGTGGCTTCTCCTCTCTTTCTGCCCATTAA 1671 0.471 MSSNNLQKLKYDNKRKDEEEAEDNVLFHQSETIPLSSPPPYGFSEPPWPSHFVEEDNNEEEVVYADKVKVQIFDLETSSNSTSTVAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIGGYSLLWLLMWTTVMGLLIQLLSARLGVASGRHLAELCREEYTRWARLVLYVMAEMALIAADIQEVIGSAIAIKILSHGVFPIWAGVVITALDSFVFLFLENYGVRKLEGVFAIFVGTMALSFAWMFFDTKPSPKQLLIGILVPKVSSKTLRQAVELIGCVITPHNVFLHSALVQSRNIDIKNKGQVQEALNYYTIESTLALIIAFFINLSVMTVFARVFYDTEQDDAIGLVNAGQYLQEKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLRLKKWLRALITRSLAIVPTMIVAVVFNTSEGSLDTLNEWLNVVQSIQIPFALIPLLTLVSKEEVMGTFRIGPVVEKVAWTVAVLVILVYGYMLLDFFLSEVKGIVYGFVVFLCAAAWLSFIAYLVQHSGAFSSFLHTSPHSRGFSSLSAH 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4333g00028 556 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 81 532 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 NCBIfam Nramp family divalent metal transporter 100 469 - -
Pral4333g00028 556 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 93 471 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 PRINTS Natural resistance-associated macrophage protein signature 204 223 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 PRINTS Natural resistance-associated macrophage protein signature 229 250 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 PRINTS Natural resistance-associated macrophage protein signature 385 404 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 PRINTS Natural resistance-associated macrophage protein signature 174 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 PRINTS Natural resistance-associated macrophage protein signature 447 466 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 PRINTS Natural resistance-associated macrophage protein signature 413 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 PRINTS Natural resistance-associated macrophage protein signature 278 301 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 MobiDBLite consensus disorder prediction 9 26 - -
Pral4333g00028 556 Pfam Natural resistance-associated macrophage protein 116 477 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 Hamap Divalent metal cation transporter MntH [mntH]. 82 503 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4333g00028 556 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4333g00028 Pral-Chr4333 463435 466610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4333g00028 57 534 Inorganic Solute Cotransporters AT1G47240 71.967 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4333g00028 K21398 - gmx:100801411 829.706