Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4325g00011 ATGGCTGGCATAGCAGAGTCGTTGTTGCTTGTTACTTTATGTGGCTCCTGTACTTTTCTAACCTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGTGGACCATACTATCTCATTGGTCGTGCTCTTGGTCCAGAAGTTGGAGTTAGCATTGGTCTTTGTTTCTTTCTGGGGAACGCAGTTGCTGGAGCCCTTTATGTGTTGGGAGCTGTAGAAACTTTTTTGAAAGCAGTGCCTAAAGCTGGGATTTTTGGAGAGACTATCACGCAAGTTAATGGTACTGCCATTGCAGAACCGATACACGTTATAAGTTCCCATGATATGCAAATTTATGGAATTGTTGTGACTATTATATTATGCTTTATTGTATTTGGAGGTGTAAAGATCATTAATCGGGTTGCTCCTGCTTTTCTTATACCTGTTTTGTTCTCGCTGGCCTGCATATTCATGGGGATTTTCTTGGCAAGAAAGGATAAGCCTGCAGATGGAATCACGGGACTGAGTTTGGAGACATTTAAAGAAAATTGGAGTTCAGATTATCAAAAGACTGATGCCAATGGAATTCCCGATGCTAATGGATCAGTAACCTGGGGTTTCAATTCATTGGTTGGGCTCTTTTTCCCAGCCGTGACGGGAATAATGGCAGGTTCAAATCGATCATCGTCTCTGAAAGATACTCAACAATCAATTCCTGTTGGAACCTTAGCTGCTACTCTTGCGACTTCTGCTATGTATCTGATTACTGTTTTCTTGTTTGGTTCTGTTGCAACGAGAAACAAGCTGTTAACAGATAGGCTACTTACGGCTACCATTGCTTGGCCTTTTCCATCTTTAATCAAAATTGGGATTATTCTTTCAACTCTGGGCGCTGCTCTTCAGAGCCTGACGGGAGCCCCACGTTTGCTTGCAGCAATAGCCAATGATGATATTTTACCTGTTCTGAACTACTTCAAAACTGTGGATGGCAGTGAGCCTCACCTTGCTACACTTTTCACCGCTTTCCTCTGTATTGGGTGTGTCATAATTGGCAATCTGGATCTCATCACCCCAACAATAACTATGTTCTTCCTTCTATGTTATGCGGGTGTCAACTTGTCCTGCTTTCTTCTGGATCTGCTTGATGCTCCTAGTTGGCGTCCTCGGTGGACTTTTCACCACTGGAGCTTGTCTCTTTTTGGTGCATTACTTTGTGTAGTCATCATGTTCCTGATCTCTTGGTCATTCACAGTGGTGTCTTTAGCTCTTGCAAGCCTTATATACAAGTATGTCAGTATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTTAAAAGTGCATATTTCCAATTAGCACTTCGCAGCCTTAGGTCACTTGGAGCAAGCCAAGTGCACCCAAAGAATTGGTATCCAATTCCTTTAATATTCTGCCGGCCTTGGGGCAAATTGCCAGAAAATGTACCTTGCCATCCCAAACTAGCAGACTTTGCTAACTGCATGAAAAAAAAAGGTAGAGGAATGTCCTTATTTGTCTCGATTTTGGATGGTGACTACCATGAATGTGCCGAAGATGCCAAGACTGCTTGCAGACAACTAAGTACCTACATTGATTACAAGAATTGTGAAGGAGTCGCTGAGATAGTTGTAGCCCCCAACATGTCAGAAGGCTTTCGTGGTATTATACAGACTATGGGCCTTGGCAATCTTAAGCCAAACATTGTCGTGATGCGCTATCCAGAAATATGGCGACGTGAGAACTTGACGGAGATCCCAGCAACCTTTGTTGGGATAATTAATGATTGCATTGTAGCAAACAAAGCAGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCTAATGAGTACCAGAAGCAATACGGCACAATTGATTTGTATTGGATTGTGAGAGATGGTGGTTTAATGCTTCTTCTCTCCCAGCTTCTTCTTACGAAGAAGAGCTTTGAGAGTTGCAAGATTCAAGTTTTTTGCATTGCAGAAGAGGATGCAGATGCAGAGGTGCTGAAGGCTGATGTTAAGAAGTTTCTCTATGATCTTCGGATGCAAGCAGAAGTCTTTGTCATAACAATAAAATGGGATTCAACAATGGACGGTGGCGAGTCTCAGCAAGATGAATCATATGAAGCATTTACTAGCGCGCAGCGAAGAATCAGTGATTACTTGGCCGAAATGAAGGCAACAAAGCGGGACGATGCCCCTCTGATGGCTGACGGTAAGCCTGTGGTTGTGAATGAGAAGCAGGTGGAGAAGTTTCTTTACACAACATTGAAGCTGAATTCTACAATGCTGAAGTACTCAAGAATGGCAGCAGTTGTGCTGGTAAGCCTGCCTCCGCCTCCATTGAACCACCCTGCTTATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAAGGTACCCAGGATTTTGATTGTAAGAGGATACCGTAGAGATGTTGTGACTCTATTCACATAG 2457 0.4339 MAGIAESLLLVTLCGSCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPKAGIFGETITQVNGTAIAEPIHVISSHDMQIYGIVVTIILCFIVFGGVKIINRVAPAFLIPVLFSLACIFMGIFLARKDKPADGITGLSLETFKENWSSDYQKTDANGIPDANGSVTWGFNSLVGLFFPAVTGIMAGSNRSSSLKDTQQSIPVGTLAATLATSAMYLITVFLFGSVATRNKLLTDRLLTATIAWPFPSLIKIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKTVDGSEPHLATLFTAFLCIGCVIIGNLDLITPTITMFFLLCYAGVNLSCFLLDLLDAPSWRPRWTFHHWSLSLFGALLCVVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSLFVSILDGDYHECAEDAKTACRQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKKSFESCKIQVFCIAEEDADAEVLKADVKKFLYDLRMQAEVFVITIKWDSTMDGGESQQDESYEAFTSAQRRISDYLAEMKATKRDDAPLMADGKPVVVNEKQVEKFLYTTLKLNSTMLKYSRMAAVVLVSLPPPPLNHPAYFYMEYMDLLLEKVPRILIVRGYRRDVVTLFT 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4325g00011 818 NCBIfam K-Cl cotransporter 1 818 IPR004842 GO:0006811|GO:0015377|GO:0016020
Pral4325g00011 818 Pfam Solute carrier family 12 619 817 IPR018491 GO:0006811|GO:0016020|GO:0022857
Pral4325g00011 818 Pfam Solute carrier family 12 487 608 IPR018491 GO:0006811|GO:0016020|GO:0022857
Pral4325g00011 818 FunFam Cation-chloride cotransporter 1 1 435 - -
Pral4325g00011 818 Gene3D Amino acid/polyamine transporter I 1 435 - -
Pral4325g00011 818 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 1 815 IPR004842 GO:0006811|GO:0015377|GO:0016020
Pral4325g00011 818 Pfam Amino acid permease 2 453 IPR004841 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4325g00011 Pral-Chr4325 396913 411125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4325g00011 1 818 Inorganic Solute Cotransporters AT1G30450 82.418 0.0 1387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4325g00011 K14427 - gmx:100795205 1449.88