Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4323g00011 ATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCAATGATTCTCAAGAAAAATACGATGTGTTCATCAGTTTCAGCGGCAAGGACGTTAGACGAGGTTTTCTGAGTCATCTAGTAAAGGAACTATGTCGAGCGAAAATTAGGGCTTATGTAGATGAAGAAATGAAAAGAGGAGAACAAATATCATCCTCGCTTCGGGGAGCAATTCAAAACTCGCAAATCTCAATCGTCATATTCTCAAAAAACTACGCCTCTTCAAGCTGGTGTTTGGATGAGCTTGAAGAAATCATGAAAATGAAGGAACAAGTTGTTTTACCCGTTTTTTACTACTTAGATCCCTCACATGTACGGCACCAGCGAGGCGCTTATAAGAGGGCATTTGCTAAACATGAATTGAAGTTTCAAGGAAACGGCTTGAAGGTTCAAAATTGGAGATCAGCCTTGAAGAATGCTGCTGAGCTATCTGGCTATAATATGTCCCATTATCGTAATGAATCTGAACTCATAGATGGCATCGTCAATGGTGTTTCGTCAAGCTTGAATATCTCTCCTAGTGAATCAAAAGGCCTTGTTGGGATTGATGAACATCTTGATTGTATTAGATTGTTTTTGGAAAGGAAGTCAAAAGAAGTTCAAATCCTTGGAATTTGTGGCATGAGGGGCATCGGTAAATCAACCATTGCACAAGTTGCAATTGACAAATTCTCTTCCCACTTTGAAGGCTCTTACTTTTTAGAAAATGTGAGAGAAGAATCGCAAAAGTATGGGCTGAAATCTTTAAGAGCGAAACTTATTTCTGAGCTGCAAGGGGAAAAATCCACTTTTGTTCATAAAAGGCTTGTTAGACGAAGAAAAGTTTTTGTTGTGCTTGATGATGTGGGTTCTTCAGAACAACTACAGCATTTGGTTACAGATGGAATTCATTGGGGACCTGGTAGTAGATTCATTGTAACAAGCAAAGACAAGCAAGTGCTAACTGCTGGCGGAGTTCATGCCATACATGAAGTCAAGGAATTGGGCCCTAAAGAATCCCTTAAGCTTTTCAGCTTAAATGCCTTCAAAAAAAGCCATCCTGAACAGGGATATGAGGAACTTTCACAGAGGGCAGTTGGTTATGCCAAGGGCCTTCCTCTAGCTTTAAAAGTTGTGGGTTCATCTCTTTGTTCTAGAGACAGAGGAACATGGGAAAGTACACTGAGAAAACTTGAGAGGTACCCCGATCCTCAAATTCAAGATGTGTTAAAAACGAGCTATGATGGATTAGATGATGTGCTAAGGGACGTATTTCTTGACATTGCTTTCTTTTACAAAGGAGAAGATAAAGATCATGTCATAAGGCTACTTGATGCCAGTAACCTTTTTGCTGCTTATGGAATAGAAGGACTTCTAGATAAAGCTCTTATATCCATTTCAAATGACAAGGTAATACAAATGCATGACTTAATTCAAGAAATGGGTTGGGAAATAGTTCGGCAAGAATGCAAGGAAAATCCTGGAAGACGTAGTCGGTTGAAGGACTTTGAGGAAGTGTATGATGTGTTAAAAATAATAAGGGAACTGATGCCATTAAAGGGATAG 1578 0.3929 MASSSSSSSSFFNDSQEKYDVFISFSGKDVRRGFLSHLVKELCRAKIRAYVDEEMKRGEQISSSLRGAIQNSQISIVIFSKNYASSSWCLDELEEIMKMKEQVVLPVFYYLDPSHVRHQRGAYKRAFAKHELKFQGNGLKVQNWRSALKNAAELSGYNMSHYRNESELIDGIVNGVSSSLNISPSESKGLVGIDEHLDCIRLFLERKSKEVQILGICGMRGIGKSTIAQVAIDKFSSHFEGSYFLENVREESQKYGLKSLRAKLISELQGEKSTFVHKRLVRRRKVFVVLDDVGSSEQLQHLVTDGIHWGPGSRFIVTSKDKQVLTAGGVHAIHEVKELGPKESLKLFSLNAFKKSHPEQGYEELSQRAVGYAKGLPLALKVVGSSLCSRDRGTWESTLRKLERYPDPQIQDVLKTSYDGLDDVLRDVFLDIAFFYKGEDKDHVIRLLDASNLFAAYGIEGLLDKALISISNDKVIQMHDLIQEMGWEIVRQECKENPGRRSRLKDFEEVYDVLKIIRELMPLKG 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4323g00011 525 Gene3D - 13 182 IPR035897 -
Pral4323g00011 525 ProSiteProfiles TIR domain profile. 17 180 IPR000157 GO:0007165
Pral4323g00011 525 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 157 IPR035897 -
Pral4323g00011 525 PRINTS Disease resistance protein signature 280 294 - -
Pral4323g00011 525 PRINTS Disease resistance protein signature 213 228 - -
Pral4323g00011 525 PRINTS Disease resistance protein signature 373 387 - -
Pral4323g00011 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 432 IPR027417 -
Pral4323g00011 525 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 182 - -
Pral4323g00011 525 Pfam TIR domain 18 187 IPR000157 GO:0007165
Pral4323g00011 525 Pfam NB-ARC domain 196 424 IPR002182 GO:0043531
Pral4323g00011 525 FunFam Disease resistance protein (TIR-NBS-LRR class) 341 422 - -
Pral4323g00011 525 SMART till_3 18 154 IPR000157 GO:0007165
Pral4323g00011 525 Gene3D - 339 422 IPR042197 -
Pral4323g00011 525 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 517 IPR044974 GO:0006952
Pral4323g00011 525 Gene3D - 183 332 IPR027417 -
Pral4323g00011 525 SUPERFAMILY "Winged helix" DNA-binding domain 409 514 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4323g00011 Pral-Chr4323 181547 183915 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4323g00011 15 504 WRKY Transcription Factor Family AT4G12020 31.673 3.34e-60 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4323g00011 - - pcin:129311144 512.301