Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4323g00007 ATGGAGTGCAGGAATGTGAACAAACAGATTGTTTTACCCGTTTTCTACGACATAGATCCCTCAAGTGTACGGCATCAAAAAGGCCCTTTTAAGAAGGCATTTGCTCGTCATGAATTGAAGTATCAAGGAAACAACTTGAAGGTGCAAAATTGGAGATCAGCCTTGAAAAATGCTGCTGGCCTATCTGGCTATGTTTCATCCCATTTCGGTAATGACTCCGAGCTCATCGATATAATCGTCAAAGATGTTTCGTTAAGATTGAATGTTATCCGTCCTTCTCCTAGTGAATCAAAAGGCCTTGAGGAAAAATACATTCCTGTTCAAGAAAAACCTCTTAGTAAAAGAAAAGTTTTTGTGGTGCTTGATGATGTGGGTACTCTAGAACAATTAAAGCATCTGGTTACAGAGGGAATTTGCTGGGGACCTGGTAGTAGAGTCATTGTAACAAGCAAATACAAGCAAGCACTAGCTACTATAGGAGGACTACTTCATGAAATGCTTGAGGTCAAGGAATTGGACTTTGAAGAATCCCTCAAGCTTTTCAGCTTAAATGCCTTCAAAAAGAGCCATCCTGAGAGGGGATATGAAGAACTTTCAAAAAGACTAGTTGCTTATGCCAAGGGCCTTCCTCTAGTTTTAAAAGTTTTGGGTTTGCGTCTTTGTTCTAGAGATATAGAAGCATGGGAAAATACATTGAGAAAACTTGAGAGGCATCCCTCTCCTCCAATTCGAGATGTGTTGAGAATAAGTTATGACGGATTGGATGGCGGACGAAGGCAGATATTTCTTGACATTACTTACTTTTTTGAACGAAAACGTAAAGATCAAGTCATGAGCCTACATTATGCCAATGGCATTTTTGGTGATTGTGGAATAAAAGGACTTCTAAATAAAGGTCTCATATCCGTTTCAAATGACAATATGATACGAATGCCTGACATGATTCAAGAAATGGGTTGGGAAATAGTTTGCAGAGAATGGAACAAAAATACTGAACAAAGATGGCACTGGGAGAAACTTGTGCTACAGTACGATCAGGTGCGCAGTAGAGACCCTGTGGTCTTGTTTGGAACGGAATATAGGCCGGTGGTCACGGAGGATTGA 1104 0.4031 MECRNVNKQIVLPVFYDIDPSSVRHQKGPFKKAFARHELKYQGNNLKVQNWRSALKNAAGLSGYVSSHFGNDSELIDIIVKDVSLRLNVIRPSPSESKGLEEKYIPVQEKPLSKRKVFVVLDDVGTLEQLKHLVTEGICWGPGSRVIVTSKYKQALATIGGLLHEMLEVKELDFEESLKLFSLNAFKKSHPERGYEELSKRLVAYAKGLPLVLKVLGLRLCSRDIEAWENTLRKLERHPSPPIRDVLRISYDGLDGGRRQIFLDITYFFERKRKDQVMSLHYANGIFGDCGIKGLLNKGLISVSNDNMIRMPDMIQEMGWEIVCREWNKNTEQRWHWEKLVLQYDQVRSRDPVVLFGTEYRPVVTED 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4323g00007 367 Gene3D - 171 255 IPR042197 -
Pral4323g00007 367 Pfam TIR domain 1 99 IPR000157 GO:0007165
Pral4323g00007 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 265 IPR027417 -
Pral4323g00007 367 Coils Coil 218 238 - -
Pral4323g00007 367 ProSiteProfiles TIR domain profile. 1 87 IPR000157 GO:0007165
Pral4323g00007 367 Pfam NB-ARC domain 110 245 IPR002182 GO:0043531
Pral4323g00007 367 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 64 IPR035897 -
Pral4323g00007 367 Gene3D - 1 91 IPR035897 -
Pral4323g00007 367 SUPERFAMILY "Winged helix" DNA-binding domain 243 327 IPR036390 -
Pral4323g00007 367 PRINTS Disease resistance protein signature 111 125 - -
Pral4323g00007 367 PRINTS Disease resistance protein signature 206 220 - -
Pral4323g00007 367 FunFam Disease resistance protein (TIR-NBS-LRR class) 173 255 - -
Pral4323g00007 367 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 88 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4323g00007 Pral-Chr4323 61964 63868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4323g00007 112 344 WRKY Transcription Factor Family AT5G45050 32.906 2.99e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4323g00007 - - aprc:113851031 204.912