Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4323g00006 ATGGTTTGCGATTCTTCTCCTTCTTCTTTCCATGATTCTCAAATAAAAGATGTGTTTATCAGTTTCAGCGGCGAGGACACTAGACGCATTTTTGTCTGCCACCTGCTAGAGGAACTACGTCGGGTGAAAATTAAACCCTTTGTAGATGAGGACATAGAGAGAGGAGAACATATACCATCTTCGCTTCTGAGAGCAATTCAAGAATCGCGTATTTCAATCGTCGTATTCTCAAAACACTATGCCTCTTCAAGTTGGTGCTTGGATGAGCTAGAAAAAATAATCGACTGCAAGAACGTGAACAAACAGATTGTTTTACCCGTTTTCTACGACATAAGGCCCTCAGATGTAAGGCATCAGAAAGGCGCTTATCAAAAGGCATTTGCTCGTCATGAATTGAAGTATCAAGGAAACGACCTGAAGGTGCGAAATTGGAGATCAGCCTTGAAGAATGCTGCTGACATATCTGGCTATGTTTCATCCGATTTCAATAATGACTCTGAGCTCATCAAGAAAATCGTCAACGATGTTTCGTTAAGATTGAATGATAACCATTCTAGTCCTAGTGAATCAGAAGGCCTTGTTGGAACTGATCAACATGATGTTTCGTTAAGAGTGAATGATATCCATCCTAGTCCTAGTGAATCAGAAGGCCTTGTTGGAACTGATCAACATGATGTTTCGTTAAGATTGAATGATATCCATCCTAGTCCTAATGAATCAGAGGGCATTGTTGGAATTGATCAACATGATGTTTCGTTAAGATTGAATGATATCCATCCTAGTCCCAGTGAATCAAAAGGCCTTGTTGGGATTGATCAACATGTTGCACGTATTAGATCATTTTTGGAAATGGAGTCAAAAGAAGTTCAAATCCTTGGAATTTGTGGCATGAGTGGCATGGGTAAAACTACCATTGCCCAAGTTGCATATGACGAATTCTCTTCCCACTATGAAGGCTGTTGCTTTTTACACAATGTCAGAGAAGAATCAGAAAAGCATGGGCTGAAATATTTAAGTAACAAACTTATTTCTGAACTGCAGGGGGAAAAATCCATTCCTGTTCAAGAAAAACCTATCAGTGAAAGAAAAGTTTTTGTGGTGCTTGATGATGTGGGTACTCTAGAACAATTAAAGCATCTGGTTACAGAGGGAATTTGCTGGGGATCTGGTAGTAGAGTTATTGTAACAAGCAAAGACAAGCAAGCGCTAGATACTAGAGGAGGACTGCCTCATAAAATGCATGAGGTCAAGGAATTGGACTCTGAAGAATCCCTCAAGCTTTTCAGCTTAAATGCCTTCAAAAAGAGCCATCCTGAAAGGGAATATGAAGGACTTTCAAAAAGACTAGTTGCTTATGCCAAGGGCCTTCCTCTAGTTTTAAAAGTTTTGGGTTTGCATCTTTGTTCTAAAGATATGGAAGCATGGGAAAATACATTGAGAAAACTTGAGAAGCATCCCTCTCCTCCAATTCGAGATGTGTTGAGAATAAGTTATGATGGATTGGATGGCGGACGAAGGCAGATATTTCTTGACATCACTTACTTTTTTGAACGAAAACGTGAAGATCAAGTCATGAGCCTACATTATGCCAATGGCATTTTTGGTGATTGTGGAATAAAAGGACTTCTAAATAAAGGTCTCATATCCGTTTCAAATGACAATATGATACGAATGCCTGACATGATTCAAGAAATGGGTTGGGAAATAGTTTGCAAAGAATGGAACAAAAATACTGAACAAAGATGGCACTGGCAGAAACTTGTGCTACAGTACGATCTGGTGCGCAGTATAGACCCTGCAGTCTTGTTTGGAACGGAATATAGGCCGGTGGTCACGGAGGATTGA 1845 0.3989 MVCDSSPSSFHDSQIKDVFISFSGEDTRRIFVCHLLEELRRVKIKPFVDEDIERGEHIPSSLLRAIQESRISIVVFSKHYASSSWCLDELEKIIDCKNVNKQIVLPVFYDIRPSDVRHQKGAYQKAFARHELKYQGNDLKVRNWRSALKNAADISGYVSSDFNNDSELIKKIVNDVSLRLNDNHSSPSESEGLVGTDQHDVSLRVNDIHPSPSESEGLVGTDQHDVSLRLNDIHPSPNESEGIVGIDQHDVSLRLNDIHPSPSESKGLVGIDQHVARIRSFLEMESKEVQILGICGMSGMGKTTIAQVAYDEFSSHYEGCCFLHNVREESEKHGLKYLSNKLISELQGEKSIPVQEKPISERKVFVVLDDVGTLEQLKHLVTEGICWGSGSRVIVTSKDKQALDTRGGLPHKMHEVKELDSEESLKLFSLNAFKKSHPEREYEGLSKRLVAYAKGLPLVLKVLGLHLCSKDMEAWENTLRKLEKHPSPPIRDVLRISYDGLDGGRRQIFLDITYFFERKREDQVMSLHYANGIFGDCGIKGLLNKGLISVSNDNMIRMPDMIQEMGWEIVCKEWNKNTEQRWHWQKLVLQYDLVRSIDPAVLFGTEYRPVVTED 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4323g00006 614 Gene3D - 256 407 IPR027417 -
Pral4323g00006 614 ProSiteProfiles TIR domain profile. 14 180 IPR000157 GO:0007165
Pral4323g00006 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 512 IPR027417 -
Pral4323g00006 614 PRINTS Disease resistance protein signature 358 372 - -
Pral4323g00006 614 PRINTS Disease resistance protein signature 291 306 - -
Pral4323g00006 614 PRINTS Disease resistance protein signature 453 467 - -
Pral4323g00006 614 Pfam TIR domain 17 195 IPR000157 GO:0007165
Pral4323g00006 614 Pfam NB-ARC domain 272 492 IPR002182 GO:0043531
Pral4323g00006 614 Gene3D - 14 186 IPR035897 -
Pral4323g00006 614 Coils Coil 465 485 - -
Pral4323g00006 614 Gene3D - 418 502 IPR042197 -
Pral4323g00006 614 SUPERFAMILY "Winged helix" DNA-binding domain 490 574 IPR036390 -
Pral4323g00006 614 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 182 - -
Pral4323g00006 614 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Pral4323g00006 614 SMART till_3 15 154 IPR000157 GO:0007165
Pral4323g00006 614 FunFam Disease resistance protein (TIR-NBS-LRR class) 420 502 - -
Pral4323g00006 614 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 585 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4323g00006 Pral-Chr4323 52621 57412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4323g00006 269 593 WRKY Transcription Factor Family AT5G45050 29.607 2.01e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4323g00006 - - lja:Lj3g3v2665420.1 360.533