Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4323g00001 ATGGCTTCTTCTTCTTTCTATGAATCTCAAATCAAACACGATGTGTTCATCAGCTTCAGTGGCAAGGACACTAGATGTGGTTTTCTGAGCCATCTAGTAAAGGAACTACGTCGGGAGAACATCATAGTCTATGTTGATGAGGAACTGAACAGAGGAGAAGAAATATCATCCTCACTTCTGAGAGCAATTCAAAAATCACAAATCTCAATCGTCATATTCTCAGAAAACTATGCCTCTTCGAGGTGGTGCTTGGATGAGCTTGAAGAAATAATGGAGTGCATGAAAGTGAACAAACAAATTGTTTTACCCGTTTTCTACTACATAGATCCCTCACATGTACGGCATCAGAGAGGCGGTTATAAAACTGCATTTGCTGAACATGAATTGAGGTTTCAAGGAAACAGCTTGAAGGTTCAGAATTGGAGATCAGCCTTGAAGAATGCTGCTCACATATCTGGCTATGATTCGTCCTGTTATGGTACTGACTCTGAGCTCTTAGATGAAATCGTCAAGGATGTTTTGTTAAGAGTGAATGATATCTATCCTAGTGAGTCAAATGGCCTTGTTGGAATTCATCAACATCTTGATCGTATTAGATCATTTTTGGAAATGGAGTCAAGACAAGTTCAAATCCTCGGAATTTGGGGCATGAGTGGTATCGGTAAAACAGCCATTGCACGAGTTGCATTTGACAAATTCTCTTCTCTCTATGAAGGCTCTTACTTTTTAGACAATGTGAGAGAAGAATCACAAAAGCATGGGCTGGAATGTTTAAGAAAGAAACTTATTTCTGAACTGCAAGAGGAGAAATCCACTTTCATTCGTAGAAGGCTTATTAGACGAAGAAAAGTTTTAGTTGTGCTTGATGATGTGGGTACCGCAGAACAACTACAACATCTAGTTACAGAAGGATTTCATTGGGGGCCTGGGAGTAGAGTTATTGTAACAAGCCAAAACAAGCAAGTGCTAATTGCTGGAGGAGTTCATGCCATACATGAGGTCAAGAAATTGGACTTTGAAGAATCCCTTAATCTTTTCAGCTTAAATGCCTTCAAAAATAGCCATCCCGAAAAGGGATATGAAGAACTTTCAAAACAGGCAATTGCTTATGCCGATGGCCTTCCTCTAGCTCTGAAAGTTTTGGGTTTGCATCTTTATTCTTGTGATAGAGAAACATGGGAAAGTACATTGAGAAAACTTGAGGGGCGGCCCGATCGTCAAATTCAAGATGTGTTGAAAACGAGTTATGATGGATTAGATGATGTACAAAGGGAAATATTTCTTGACATCGCTTTCTTTTACAAGGGAGAAGATAAAGATCATGTCAAGAGGCAACTTGATGCCAATAACCTTTTTGCTGCTTATGGAATAAAAGGACTTCTGGATAAAGCTCTTATATCCATTTCAAATGACAATGTAATACAAATGCATGACTTAATTCAAGAAATGGGTTGGGAAATAGTTCGGCAAGAATGCGAGGAAAATCCTGGAAGACGTAGTCGGTTGAAGGACTTTGAGGAAGTGTATGATGTGTTAAAAAATAATAAGGGAACTGATGCCATCAAAGGCATAGTATTATATGCTTCTCTCTTTAAAGATGTACGGTTGAATGTTGACGCCTTCAAAAATATGACTAGTCTCAGAGTCATCAAGTTTTACTCTTCCTGGCATGTGAGATCTTGTAATGCGCACCCTCAAAGTTTTTTGTCGTTCTCTGATGAGCTAAGGCGCCTAGAGTGGGATGGACACCCATACCCACATCCTGAGAAACTTGGTTGGCATTCTATTCCCAACAACCATGTTGGGAAACTTTGGAAACTAGTGCAGGATTATGCGAATTCTAAGAGAATGAGCCTTGGCAGCTCAAAACAATCAATGGAGTTGATTGATTTCACAAAGGCACAGAAAATTGAATGGGAGGATATGTGTTCTTGTAAACGTTTTTGTAACGTCAATTCACATATCTTGTCTCTTTCCATGACTGCTGCTGTGAATTTAGTTCGCTCCAAAGATTCAAAGAAACGTCACAGGGAGAGTAATGTCGGATCTCTTATAAACTTTGATGTCGGTTTATGCTTTAGTGTCAGGGTATTTTCGTCGTCATCGAAGGAAATACCAGAGTTGGATTTTGTAACTTCAAAATTCGAAATACCGTGCTCATCATCAGTTCGGGGTCTCAGTGAGCTAAGAAGGATCAGACATGGTGATTCAAGACTAGAGATTCTTCCCCGAAATGAGTTGTGTTGCCTGAGATTTTTTGAAGGGCTTAGTCTTTCTGATTACAGACAAATGAATCAAAGCCCAGAGCTGCGCATCCTATTTGACGCCTTGCTCGATTTAAGAGAGCTATTTATGACTGGACACAGTGTCTTCTTTAAAACCCCTCGGCAGCAATTGCCCATCCCGGAGAGCATGGACTTGTCACGTCTGATTATTGGTTGA 2442 0.4001 MASSSFYESQIKHDVFISFSGKDTRCGFLSHLVKELRRENIIVYVDEELNRGEEISSSLLRAIQKSQISIVIFSENYASSRWCLDELEEIMECMKVNKQIVLPVFYYIDPSHVRHQRGGYKTAFAEHELRFQGNSLKVQNWRSALKNAAHISGYDSSCYGTDSELLDEIVKDVLLRVNDIYPSESNGLVGIHQHLDRIRSFLEMESRQVQILGIWGMSGIGKTAIARVAFDKFSSLYEGSYFLDNVREESQKHGLECLRKKLISELQEEKSTFIRRRLIRRRKVLVVLDDVGTAEQLQHLVTEGFHWGPGSRVIVTSQNKQVLIAGGVHAIHEVKKLDFEESLNLFSLNAFKNSHPEKGYEELSKQAIAYADGLPLALKVLGLHLYSCDRETWESTLRKLEGRPDRQIQDVLKTSYDGLDDVQREIFLDIAFFYKGEDKDHVKRQLDANNLFAAYGIKGLLDKALISISNDNVIQMHDLIQEMGWEIVRQECEENPGRRSRLKDFEEVYDVLKNNKGTDAIKGIVLYASLFKDVRLNVDAFKNMTSLRVIKFYSSWHVRSCNAHPQSFLSFSDELRRLEWDGHPYPHPEKLGWHSIPNNHVGKLWKLVQDYANSKRMSLGSSKQSMELIDFTKAQKIEWEDMCSCKRFCNVNSHILSLSMTAAVNLVRSKDSKKRHRESNVGSLINFDVGLCFSVRVFSSSSKEIPELDFVTSKFEIPCSSSVRGLSELRRIRHGDSRLEILPRNELCCLRFFEGLSLSDYRQMNQSPELRILFDALLDLRELFMTGHSVFFKTPRQQLPIPESMDLSRLIIG 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4323g00001 813 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
Pral4323g00001 813 SMART till_3 12 151 IPR000157 GO:0007165
Pral4323g00001 813 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 179 - -
Pral4323g00001 813 PRINTS Disease resistance protein signature 211 226 - -
Pral4323g00001 813 PRINTS Disease resistance protein signature 371 385 - -
Pral4323g00001 813 PRINTS Disease resistance protein signature 278 292 - -
Pral4323g00001 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 430 IPR027417 -
Pral4323g00001 813 Gene3D - 178 329 IPR027417 -
Pral4323g00001 813 Pfam TIR domain 12 187 IPR000157 GO:0007165
Pral4323g00001 813 SUPERFAMILY "Winged helix" DNA-binding domain 407 511 IPR036390 -
Pral4323g00001 813 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 154 IPR035897 -
Pral4323g00001 813 Gene3D - 336 420 IPR042197 -
Pral4323g00001 813 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 770 IPR044974 GO:0006952
Pral4323g00001 813 Gene3D - 10 177 IPR035897 -
Pral4323g00001 813 Pfam NB-ARC domain 193 417 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4323g00001 Pral-Chr4323 22199 25649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4323g00001 7 783 WRKY Transcription Factor Family AT4G12020 30.049 1.46e-80 281