Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4322g00028 ATGGCATCCATCATCATCGTTAAGCTATTCTTTTCCCTCACTTTATTTTCTTCACTTTTCTCAACATCTTCTTCTGCTTCTTCCTCTATAGATTTTTGGTGCAACCAAACTCCTCATCCTGAGCCATGCAAATCCCACATGAACCGGTTTAGACCGAACCATCCGTCAGAGTTCAGGAAAATGCTGGTTCGATTAGCACTGGACCAAGCACAAGCCATGCATAAGGAAGCTCAAGAATATGCCCCAAAATGTGTGACTAAGATGCAGAAATGTGTCTTCCATGATTGTTTAAAGCTCTACGACAATACCATCTTCCATCTAAACCGAACCCTTCATGGCCTACACACACCTTCTTGCTCCCTCTCAGACGCACAAACATGGCTCAGCACTGCCCTCACAAACATCGAAACTTGCCGGAGCAACGCGTTGCGGCTCGGAGTCGGAGAGTTTACGGTTCAAAATAATGTGAGCGACAACGTTAGGAAGATGATAAGCAATGTGTTGGCTGTGAATGGGAAAATTCTGAAGCAAGAGAATTACACAGAAGAAGAGATGAAAGCATACGGGTTTCCTAGTTGGTTTTCTGGGCGTGACAGGAGGTTGTTGAGCTTAAAGCGATCTTCGGTGAAGGCAAATCTCGTGGTGGCTCAAGATGGGACGGGCCATTTCAAGACGGTGCAAGCCGCCATTGACGCAGCATCAAGAAGAAAAGTGAAGACGAGGTTTGTGATCCGTGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTCATGATTATTGGTGATGGATCGAGAGTCACCATTATAACTGGCAGTAGAAGCGTTAAAGATGGAATTACCCCGGCTGCCTCCGCAACAGTAGGTATAGATGGTGCTCACTTCATTGCACGAGACCTCACTTTTAGAAACACGGCCGGTCCTGAAAAAGGTCAAGCGGTGGCACTCCGATCAGCCTCCGACCTCTCTGTCTTCTATCGATGCTCCATCGAAGGCTATCAAGACACTCTAATGGCTCATGCACAACGTCAGTTCTATAGAGACTGTAGGATTTTTGGCACAGTAGATTTCATTTGGGGTAATGCTGCAGTTGTTCTACAAAACTGTAGAATTCTTGTAAGAAAGCCACTTGCAGGGCAAGCAAACATGATCACAGCGCAAGGACGAGGCGACCTGTTTCAGAACACCGGAATATCAATAATCAATTCCCAAATTCGAGCGGCACCGGATTTCAAGCGGGTTTCACACTCATTTGAAACCTACTTGGGTCGGCCATGGCAGCAATATGCAAGAGCAGTTGTCATGAAGACTTACATTGAGGGATTCGTGAATCCATTGGGATGGTCTCCATGGGGCGACAATGATTTTGCTCAAGATACTTGTTATTTTGGGGAATATATGAACAATGGGGCTGGTTCTTCAACAAAAAATAGGGTAAAATGGCGTGGCTTTCATGTCATAACTAGTCCAAATGAGGCAAACCAATTCAGTGTTGCTAGTTTCCTTGCTGGTCGCACCTGGTTGCCTCGCACTGGGGTGCCTTTTGCTGTTGGTGTTTAA 1578 0.4537 MASIIIVKLFFSLTLFSSLFSTSSSASSSIDFWCNQTPHPEPCKSHMNRFRPNHPSEFRKMLVRLALDQAQAMHKEAQEYAPKCVTKMQKCVFHDCLKLYDNTIFHLNRTLHGLHTPSCSLSDAQTWLSTALTNIETCRSNALRLGVGEFTVQNNVSDNVRKMISNVLAVNGKILKQENYTEEEMKAYGFPSWFSGRDRRLLSLKRSSVKANLVVAQDGTGHFKTVQAAIDAASRRKVKTRFVIRVKKGIYEENIEVDKDNENLMIIGDGSRVTIITGSRSVKDGITPAASATVGIDGAHFIARDLTFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAVVLQNCRILVRKPLAGQANMITAQGRGDLFQNTGISIINSQIRAAPDFKRVSHSFETYLGRPWQQYARAVVMKTYIEGFVNPLGWSPWGDNDFAQDTCYFGEYMNNGAGSSTKNRVKWRGFHVITSPNEANQFSVASFLAGRTWLPRTGVPFAVGV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4322g00028 525 Pfam Plant invertase/pectin methylesterase inhibitor 29 169 IPR006501 GO:0004857
Pral4322g00028 525 SUPERFAMILY Pectin lyase-like 209 523 IPR011050 -
Pral4322g00028 525 NCBIfam pectinesterase inhibitor domain 9 173 IPR006501 GO:0004857
Pral4322g00028 525 Gene3D - 206 525 IPR012334 -
Pral4322g00028 525 PANTHER PECTINESTERASE 14 515 - -
Pral4322g00028 525 FunFam Pectinesterase 206 525 - -
Pral4322g00028 525 Pfam Pectinesterase 212 510 IPR000070 GO:0030599|GO:0042545
Pral4322g00028 525 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 175 IPR035513 -
Pral4322g00028 525 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 174 IPR035513 -
Pral4322g00028 525 CDD PMEI-like_3 33 176 - -
Pral4322g00028 525 SMART PMEI_2 25 170 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4322g00028 Pral-Chr4322 728284 730087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4322g00028 27 521 Carbohydrate Esterase AT5G51500 56.151 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4322g00028 K01051 - gmx:100816908 635.565