Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4322g00024 ATGATTCCAATTATCTTCTTCATAGCCATCAGCTTCATCAGATCAGGTACTTCTCAAGAGGAACCGTACTACGTTGGAGATGACTGTCAAAACAAAAGCCCACAAGCTCTTACTGCCTCCTACAAAGCCAACCTTAATCAGTTACTCTCAGGGCTGTCCAACGATGCTTCCATAAGCAAATACAGCAAGATCACCATCGGAAACACCACTAACACCACCGTGTATGGTCGTTACAGCTGCCGTGATGATGTTGCTGGATCCTTCTGCCAGTTCTGTGTTACTACTGCTACCAGAGAGGTTCTCCAACGTTGCCCAAATCAATCTTCTGCCATAATATGGTACAGTTACTGCATGCTGCGATACTCTAATGAGAACCTTTTTGGGAAGGTGGAGATAAGCCCGTCATGGTCCTCGGAAGGAACGAAGAAGGCGTCGGATCCAGCAGAGGGGAAGAAGGCCGAGAGTTACATAAGGAGCCTGATCAGAGAAGCAACGGAGGAGACAAAGAGATGGAGTGCATGGGGAAAGTTTAACTTAGGTGGTGGAATGAAAAGGTATGCGTTGGTACAGTGCAGTGAAGAAATTAGCAATAAGGGTTGCCAGCAGTGTTTGGAAGCTATGTTGAATAAGGCAATTCAATGTTGTGAGCAGAAGCAAGATTGGCAAGTGGGAACGCCAACCTGTTTGATTAAGTACGCTAATTACATGTTTTGCCACGAAGCAAGAGTAGAAAAGATGAAACACGGTTGGAGAGCACTCCTACAGCTTATGACCTTTCTCAGAGCCAGTTCACTAAATAAAGACCTTCCCACAATCCCTTTGCTTGCCATTCAACAGAGCACTCGTCACTTTTCAGAAGATTCTAAATTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAACACTACCAGATGGGAAGGGAATTGCTATGAAAAGGCTGTCTCAAACTTCAGGTCAAGGTTCTCAGGAGTTCATGAATGAAGTGATATTCATAGCAAAATTGCAGCATAGAAATCTTGTTAGTCTCTTGGGTTGTTGCATGGAGGAAAATGAAAAACTACTTGTATATGAGTATATGCCAAATTCTAGCCTTGGCTCACACCTTTTCAATGAAGAAAATAGAAAGAACCTAGATTGGAAGCAAAGACGAAATATTATTAATGGAATTGCAAAAGGACTTTTGTATCTTTGTGAAGACTCTCGACTTAGAGTAATTCATAGAGATTTGAAAGCCAGCAATGTCCTTTTGGATTATGAGATGAACCCTAAAATTTCAGATTTTGGAATGGCAAGGACCTTTGAAGGAGCACAAAATCAACAAAATACAAGACGAATAATGGGTACATATGGTTACATGGCTCCGGAATATGCTATGGAAGGACTATTTTCAGTGAAATCAGATGTTTTTAGTTTTGGAGTTCTTCTCCTAGAAATTATATGTGGGAATAGGATTAGTGGTTTCTATCTCTCTGAACATGGTCAAAGTCTTCTATGTTATGCTTGGAATTTGTGGTATGAAGGAAAATGTTTGGAATTGATGGACCCAATGCTAGAAAATTCATATATTGCAAATGATATTTTGAAGTGCATACATATTAGTTTGCTTTGTGTTCAAGAAGACGCAGTAGATAGGCCAACCATGTCTACTGTTATCGTCATGCTTGCAAGTGACACAATGACTTTTCCTAGACCTAATCGTCCTGCATTTTCAGTTGGAAGAATGGTCTTAGAAGATTTATCCACTTCAAATATTTCCAAAGATGCTTCTATTAATATGGTAACCTTGTCTCACATCAAACCCAGGTAA 1809 0.4063 MIPIIFFIAISFIRSGTSQEEPYYVGDDCQNKSPQALTASYKANLNQLLSGLSNDASISKYSKITIGNTTNTTVYGRYSCRDDVAGSFCQFCVTTATREVLQRCPNQSSAIIWYSYCMLRYSNENLFGKVEISPSWSSEGTKKASDPAEGKKAESYIRSLIREATEETKRWSAWGKFNLGGGMKRYALVQCSEEISNKGCQQCLEAMLNKAIQCCEQKQDWQVGTPTCLIKYANYMFCHEARVEKMKHGWRALLQLMTFLRASSLNKDLPTIPLLAIQQSTRHFSEDSKLGEGGFGPVYKGTLPDGKGIAMKRLSQTSGQGSQEFMNEVIFIAKLQHRNLVSLLGCCMEENEKLLVYEYMPNSSLGSHLFNEENRKNLDWKQRRNIINGIAKGLLYLCEDSRLRVIHRDLKASNVLLDYEMNPKISDFGMARTFEGAQNQQNTRRIMGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIICGNRISGFYLSEHGQSLLCYAWNLWYEGKCLELMDPMLENSYIANDILKCIHISLLCVQEDAVDRPTMSTVIVMLASDTMTFPRPNRPAFSVGRMVLEDLSTSNISKDASINMVTLSHIKPR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4322g00024 602 FunFam Cysteine-rich receptor-like protein kinase 28 25 125 - -
Pral4322g00024 602 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 598 - -
Pral4322g00024 602 Gene3D - 136 237 IPR038408 -
Pral4322g00024 602 Gene3D - 24 126 IPR038408 -
Pral4322g00024 602 ProSiteProfiles Gnk2-homologous domain profile. 132 237 IPR002902 -
Pral4322g00024 602 Gene3D Transferase(Phosphotransferase) domain 1 360 562 - -
Pral4322g00024 602 SUPERFAMILY Protein kinase-like (PK-like) 269 585 IPR011009 -
Pral4322g00024 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Pral4322g00024 602 Gene3D Phosphorylase Kinase; domain 1 246 359 - -
Pral4322g00024 602 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 254 359 - -
Pral4322g00024 602 CDD STKc_IRAK 290 555 - -
Pral4322g00024 602 Pfam Protein tyrosine and serine/threonine kinase 287 553 IPR001245 GO:0004672|GO:0006468
Pral4322g00024 602 FunFam Liguleless narrow1 360 563 - -
Pral4322g00024 602 SMART serkin_6 284 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4322g00024 602 ProSiteProfiles Gnk2-homologous domain profile. 23 126 IPR002902 -
Pral4322g00024 602 Pfam Salt stress response/antifungal 29 123 IPR002902 -
Pral4322g00024 602 Pfam Salt stress response/antifungal 153 235 IPR002902 -
Pral4322g00024 602 ProSiteProfiles Protein kinase domain profile. 284 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4322g00024 Pral-Chr4322 496716 534714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4322g00024 18 602 Receptor kinase-like Gene Family AT4G23150 39.291 2.05e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4322g00024 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4322g00024 - - gmx:100795922 730.324