Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4322g00017 ATGTTCAAGGCATCTTCGTCTCTCACCTTTCTTTCCTCTCTCCTCTTCATTTCCGCCATAGCCGACACGCCCTCAAGCTTCATCAGATCCTCTTGCAGTACCACAACGTACCCTTCAATCTGCGTCGAATCTCTCTCCTCCTACGCCTCCTCCATCCAACAAAATCCTCACCAGCTGGTTCAAACCGCTCTGTCTCTCAGCCTCAACACCACTCTCTCCACCAAATCCTTCGTCTCAAAGCTCAACAAGTTCAGAGGCCTCAAGAACAGAGAGAACCAGGCTCTCCATGACTGCTTGGAAGAGATCGGCGAAAGCGTCGATCGGCTCAGCCGATCCATCAAGGAGCTTAAACTCTGCGTCAAATCCAAGGGTCAGGACTTCCAATGGCACATAAGCAATGTCGAGACGTGGGTGAGCTCTGCGATCACCGATGAAAACACTTGTACAGATGGATTCGCCGGAAAGGCTTTGAATGGCAGAATCAAGAGTTCTATAAGGACCAGAATGCTTCGTGTTGCTCAGGTCACTAGTAATGCTCTCTCCCTCATCAATCACTACGCCTCTAAAGGCTAA 573 0.4991 MFKASSSLTFLSSLLFISAIADTPSSFIRSSCSTTTYPSICVESLSSYASSIQQNPHQLVQTALSLSLNTTLSTKSFVSKLNKFRGLKNRENQALHDCLEEIGESVDRLSRSIKELKLCVKSKGQDFQWHISNVETWVSSAITDENTCTDGFAGKALNGRIKSSIRTRMLRVAQVTSNALSLINHYASKG 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4322g00017 190 CDD PMEI-like_3 30 188 - -
Pral4322g00017 190 NCBIfam pectinesterase inhibitor domain 6 186 IPR006501 GO:0004857
Pral4322g00017 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 186 IPR035513 -
Pral4322g00017 190 FunFam Pectin methylesterase inhibitor 1 23 186 - -
Pral4322g00017 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 186 IPR035513 -
Pral4322g00017 190 Pfam Plant invertase/pectin methylesterase inhibitor 26 182 IPR006501 GO:0004857
Pral4322g00017 190 SMART PMEI_2 23 182 IPR006501 GO:0004857
Pral4322g00017 190 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4322g00017 Pral-Chr4322 242216 243009 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4322g00017 23 183 Carbohydrate Esterase AT3G14310 32.927 3.68e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4322g00017 - - pcin:129313593 330.872