Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4322g00002 ATGGATGAGAGAGTTGGAAAGAAAAGATCCAAGTTTAACAGGAGCAAGGTCTCTATGGATGTGCAAGCAAATGATGAAGAGGATCTGGGACATATTCTTAAGGTGGAAACGGATATAGAAAATAAGCAGAAGCATAAGGATGAAAAGAGCAAATGCAGAACTGATGAAGTGTTGAATTTGATCAAAGTTGTTGAGGAAAATTGTGCAGGTATAGCTGGTAGGGGACGAAATTGTTCAAGTGCAGGGGATGCCACATTTATGAGAATTACAGAAGAGAACAGTAAAAGTAACAGGAAGAAACGGAAGGAGGGAAAAGATAATGATGAAATAATCAATGGTATCATTGATCGTGATAATGAAATGCAGTTCTTAGATGACAAGCAAGAAAGGAAAACAAAGAAAAGAAAACATTGCAATGATTCCATCCCTGAAATGCAAGTTTTTGCTTTGAAATTGAGAGGTGAAAACAATGGAACAGAGGCTATTGGGTTGAAAAGCAATGAAGCTGGATCATCTTTAGCCGGAGCCAAGACGATAGATGCTAATACAGATTCTGTTGTCATGAACAATGATGATCAAGGGAAGAAGATTAAGAAGAAGTTAAAGGAGAAGAAGAAACTAACCAGCAAAAGCAAAAGAACAGAAGATGATGAATTCAAAAGCAATGGTGGTGATCAAGCTTTAGCTGAAAGTGATGAAGGTGATCCCAATTTAGAGAAAAGCAATATGGGGGATGCTGTTGAGCATGCCAGTTTTACCAAAGGTGATGATCAAGGCGAGAAGAAGAAGAAGAAAATGAAAAAGAAGAAGAGCAAGGAAGATAAAGTTAAGTTTTCTGATCAAGCTTTAGCTGAAAGTGATGAAGGTGATCCCAATTTGGCAAAACACAATATGGGGGATGCCGTTGAACATGCTAGTTTTATCAAAGGTGGTGATCAAGATGAGAAGAAGAAGAAAATGAAAAAGAATAAGAAGAGCAAGGAAGATAAACGGGTTAAGTTTTCTGATCAAGCTTTAGCTGAAAGCGATGAAGGTGATCCCGATGTAGCAAAACACAATGTGGGGGATGCTGCTGAACATGCTAGTTTTACCAAAGGTGACGATCAAGGCAAGAAGAAGAAAAAAATGAAAAAGAAGAAGAAAAGCAAGAAAGATAAGCGAGTTAAGTTTTCTGAACAAGTGGAGGTTTTCAATGATCACTTAGTACAAGGGAAAAGGTTTACACCAGAGGAAGATGAGAAGATTATAGAGGCTATTTACAACTATATATATTCTCATGGGTTGGGTGATCGTGATCAAGGGGTGGACATGATTCTCCATTGCTCATCTTATCCTAAGATTAGAGGTTGTTGGAAGGAAATTGCATCAGCTTTACCTCACCGGCCTCTAGAAAGCGTATATCATCGTGGTCATATTTTGTTTGAAAGGGATGACTCTCGTAAATGGACTCCTGAAGAGTTAGAAATCGTACGAAATTTCCATAAAAAGCATGGATCTAACTGGAAAATGTTGGCTGACGCAATGGGGAAACATCGGTTTCATGTAAAGGATGCATGGCGTAGGATAAAATTGGGAAATATCAATAGAGGAAATTGGTCACAAGAGGAGTATCAAAAATTATTTGATTTAGTAAATGCTGATCTATGTCTGAGGGCTTTAGAGGACAAAAGAAAACAAAAACATGGTATGCTACGGGATAATATATGCTGGGAGGCAATTGGTGATAAGGTGGCAACTAGAACCAGTCAACTTTGCTGTATGAAGTGGTATGAAAAATTAACATCTCCTCTTGTCGCTGAAGGTGAATGGGCTGATACTGATGACTATCGCCTGCTCAATGCTTTATATACATTGGATGCCTGCTGCATGGAGGAGGTGGAGTGGGATTATTTGCTTGAGCATAGGTCTGGTGATGTATGTAGAAAACGATGGAATCAAATGGTCCAGCATATTGGGGAGCATGGGAACAAGTCATTTTCTGAGCAAGTAGAAATTCTTTCCAAGAGATATCGTCCTGACTTAGTGGAAGCAAGAGAAGCCTTTGATAACAAGCCTGTGATCCCTTGA 2067 0.3895 MDERVGKKRSKFNRSKVSMDVQANDEEDLGHILKVETDIENKQKHKDEKSKCRTDEVLNLIKVVEENCAGIAGRGRNCSSAGDATFMRITEENSKSNRKKRKEGKDNDEIINGIIDRDNEMQFLDDKQERKTKKRKHCNDSIPEMQVFALKLRGENNGTEAIGLKSNEAGSSLAGAKTIDANTDSVVMNNDDQGKKIKKKLKEKKKLTSKSKRTEDDEFKSNGGDQALAESDEGDPNLEKSNMGDAVEHASFTKGDDQGEKKKKKMKKKKSKEDKVKFSDQALAESDEGDPNLAKHNMGDAVEHASFIKGGDQDEKKKKMKKNKKSKEDKRVKFSDQALAESDEGDPDVAKHNVGDAAEHASFTKGDDQGKKKKKMKKKKKSKKDKRVKFSEQVEVFNDHLVQGKRFTPEEDEKIIEAIYNYIYSHGLGDRDQGVDMILHCSSYPKIRGCWKEIASALPHRPLESVYHRGHILFERDDSRKWTPEELEIVRNFHKKHGSNWKMLADAMGKHRFHVKDAWRRIKLGNINRGNWSQEEYQKLFDLVNADLCLRALEDKRKQKHGMLRDNICWEAIGDKVATRTSQLCCMKWYEKLTSPLVAEGEWADTDDYRLLNALYTLDACCMEEVEWDYLLEHRSGDVCRKRWNQMVQHIGEHGNKSFSEQVEILSKRYRPDLVEAREAFDNKPVIP 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4322g00002 688 MobiDBLite consensus disorder prediction 208 223 - -
Pral4322g00002 688 ProSiteProfiles Myb-like domain profile. 524 593 IPR001005 -
Pral4322g00002 688 CDD SANT 481 510 IPR001005 -
Pral4322g00002 688 SUPERFAMILY Homeodomain-like 573 657 IPR009057 -
Pral4322g00002 688 MobiDBLite consensus disorder prediction 89 108 - -
Pral4322g00002 688 Gene3D - 483 521 - -
Pral4322g00002 688 MobiDBLite consensus disorder prediction 273 294 - -
Pral4322g00002 688 SUPERFAMILY Homeodomain-like 480 540 IPR009057 -
Pral4322g00002 688 ProSiteProfiles Myb-like domain profile. 481 523 IPR001005 -
Pral4322g00002 688 Gene3D - 522 597 - -
Pral4322g00002 688 MobiDBLite consensus disorder prediction 329 355 - -
Pral4322g00002 688 MobiDBLite consensus disorder prediction 371 386 - -
Pral4322g00002 688 MobiDBLite consensus disorder prediction 92 108 - -
Pral4322g00002 688 Pfam Myb-like DNA-binding domain 482 540 - -
Pral4322g00002 688 Coils Coil 197 217 - -
Pral4322g00002 688 PANTHER GB|AAC33480.1 48 688 - -
Pral4322g00002 688 ProSiteProfiles Myb-like domain profile. 595 648 IPR001005 -
Pral4322g00002 688 SMART sant 528 595 IPR001005 -
Pral4322g00002 688 SMART sant 478 525 IPR001005 -
Pral4322g00002 688 SMART sant 403 476 IPR001005 -
Pral4322g00002 688 SMART sant 599 650 IPR001005 -
Pral4322g00002 688 MobiDBLite consensus disorder prediction 185 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4322g00002 Pral-Chr4322 22625 26471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4322g00002 459 649 MYB Transcription Factor Family AT4G32730 24.631 4.56e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4322g00002 Myb_DNA-bind_6 2.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4322g00002 - - pcin:129298814 782.326