Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4321g00002 ATGTCAAGTATGGATGCCTCTTCCAGTACATGTGAGATTGTGGAATCAAGAGAAGAGATTATTTCTGAGTTCAGAATGGATGAAAAAGCTGAGAGTAGTTGTGCCCACAGATCAAGGAAAAAGGGTTCTGTAGAGGATGATATTGACCGTCTCTTCCAAGCTATTGACTTCAAAAATTCAGCTAGAGGTTCTAGTACACCACGTTCTCAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTTAGTTCATCTCAGGCATCAGGAATTGGGATTGCAGAGCCTGTAAGTTTAAAGCAGGCACTTAGAGGACTTTGCATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTGTCAAAGCCGTCCAGTTCGTCAAGAGCATCTGAGGCGGGAACTATTAAGAAACTGTATACAGCTGTGGTAGATGAGGGGAAAGGGAACTTGGTGGAAATCTCCCTTGTGCCTGAGATTTCTGGACCTTCTGGTAAAATGCCTAGGGAAGATAAGTCAAGTTCTACTGCTGATCATTCTACTCATTTTGTTGATGTAACAAACCCAAAAACAGTCACAACCAGGGTAGCATCCCGGGATCAGATTGTTCCTCTTCAATTGGAAGGTGAAAGTGAGAAGTTAGTTGCAGCTGCCGGAAAATCAGTACTTCCAAAAGCATCTACAGTTGATTATGAAAGTGAGGAAATGTCTGAGGTCAAGATTGTTTCTGCTTCCTCAAGCAAAGCTTCCCACTGTCCTACTATGCTAGATAAGGGCCAGGAAGTAGAGTTACATTCTGAAGCTAATCAGCCAAGCTCTAGTACGAGCAGTGGGGTGGAGAAATCCACAAGCAGTACTACTTGTTTGGCAAAGCCAATGTTCAGGAACATGAGCTTCCTTAGGAAAAAGGTAAAGCAAGAATTATGTTCTACCTCTAGTGGCTCCACACAATGTACCAGAAAAGTTGACAATGACTTGGATCCTAGTACGAGTAATTTGAACAAAGAGACTGATAAATATAATTCGAAGCAGGAAATGAAAGAAAATGATAAATTGTCTCCCAGCAGTTCAAATCATAGTGTTGAAGTAAATTCAAATAATGTGGGTGCAGATTCAATCAAAAGTGGTTTCAGTATGAATTGCAGTAAGAAAACTAAATTTCTAGTGACAAAAATTGATGAAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAGAGCTCAAAAAGCAGCATTGGGGAGTATAGTAGTAGCACAACAACAAGCATAAGTGAAGAGAGCAATCTGAGTGGCTCTAGTCGCAGTGGTCACAGGCCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCAGCAGCAGCATGGGAACTTAAGTTTGAAACACTTCAAGCTGCTCAGGAGGCTTGGTTGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATTGGTACAAGCTGCCTTTTTGCCTTGAAAGTGATGGATAATGAGTTTTTGGCCAACCGGAAGAAAATTTTCAGGGCCCAGACTGAGAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCAACACTCTATGCCTATATTACAACTGATAAGCTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTACATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACCAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTGGAGTATTTGCACATGCTAGGAGTCATATATCGAGACTTGAAGCCTGAAAATATCCTTGTTCGAGAAGATGGCCACATTATGCTGACGGATTTTGACTTATCACTTAGGTGTTCTGTGAATCCCACGTTAGTCAAGTCATCTTCGCCGGATGTGGAATCAACAAAGAAGATGTCCAGCCCCTGTTCAGAGGCCAGCTGCATACACCCTTTCTGTCTACAACCTGATTGGCAGGTTTCCTGTTTCACTCCTATTCTTTTATCCGCTGGAGCAAAATCTCGAAAGATGAAGTCCGAGGCTGCCCAGGTTGGGCCCTTGCCACAACTTGTCGTTGAGCCAACCAGTGCCCGCTCTAACTCATTCGTTGGTACCTATGAATACCTGGCTCCGGAGATCATCAAAGGCGAGGGCCATGGGAGTGCTGTGGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTGTATGGCAAGACTCCCTTTAAAGGAGCTGGAAACGAGGAAACATTATCCAATGTTGTGTCGCAGAGCCTTAAATTCCCAGATGCTCCTTTGGTCAGTTTTCATGCAAGAGATCTGATACGCGGATTGCTGATAAAAGACCCGGAAAATCGGTTAGGTTCCGTAAAAGGTGCTGCAGAGATAAAGCAGCACCCTTTCTTTGAAGGCCTAAACTGGGCTCTGATAAGATGTGCCGCACCACCTGAGCTGCCCAGATTTCGTGATTTTGGAAGTTGTGTTCCATCTATGGCGTCACAGAAGGAGAATGCGAATGATTTAGAGGATACAGAAGATTGTGAGGAGTTTGAGCTGTTTTAG 2538 0.435 MSSMDASSSTCEIVESREEIISEFRMDEKAESSCAHRSRKKGSVEDDIDRLFQAIDFKNSARGSSTPRSQKSALKRPIKVSSSQASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKPSSSSRASEAGTIKKLYTAVVDEGKGNLVEISLVPEISGPSGKMPREDKSSSTADHSTHFVDVTNPKTVTTRVASRDQIVPLQLEGESEKLVAAAGKSVLPKASTVDYESEEMSEVKIVSASSSKASHCPTMLDKGQEVELHSEANQPSSSTSSGVEKSTSSTTCLAKPMFRNMSFLRKKVKQELCSTSSGSTQCTRKVDNDLDPSTSNLNKETDKYNSKQEMKENDKLSPSSSNHSVEVNSNNVGADSIKSGFSMNCSKKTKFLVTKIDEKSRSKEKGEFSQSSKSSIGEYSSSTTTSISEESNLSGSSRSGHRPHMSKHLRWEAVRAVQQQHGNLSLKHFKLLRRLGCGDIGTVYLAELIGTSCLFALKVMDNEFLANRKKIFRAQTEREILQMLDHPFLPTLYAYITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPDVESTKKMSSPCSEASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKSEAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKGAGNEETLSNVVSQSLKFPDAPLVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPRFRDFGSCVPSMASQKENANDLEDTEDCEEFELF 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4321g00002 845 MobiDBLite consensus disorder prediction 155 184 - -
Pral4321g00002 845 FunFam serine/threonine-protein kinase D6PK-like 545 612 - -
Pral4321g00002 845 MobiDBLite consensus disorder prediction 59 78 - -
Pral4321g00002 845 MobiDBLite consensus disorder prediction 334 348 - -
Pral4321g00002 845 ProSiteProfiles Protein kinase domain profile. 461 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4321g00002 845 MobiDBLite consensus disorder prediction 394 437 - -
Pral4321g00002 845 Gene3D Phosphorylase Kinase; domain 1 460 544 - -
Pral4321g00002 845 Gene3D Transferase(Phosphotransferase) domain 1 545 611 - -
Pral4321g00002 845 Gene3D Transferase(Phosphotransferase) domain 1 688 811 - -
Pral4321g00002 845 Pfam Protein kinase domain 691 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4321g00002 845 Pfam Protein kinase domain 462 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4321g00002 845 SMART serkin_6 461 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4321g00002 845 MobiDBLite consensus disorder prediction 261 283 - -
Pral4321g00002 845 MobiDBLite consensus disorder prediction 238 283 - -
Pral4321g00002 845 SUPERFAMILY Protein kinase-like (PK-like) 434 813 IPR011009 -
Pral4321g00002 845 PANTHER FLIPPASE KINASE 1-RELATED 273 813 - -
Pral4321g00002 845 FunFam Serine/threonine-protein kinase D6PK-like 459 544 - -
Pral4321g00002 845 MobiDBLite consensus disorder prediction 305 371 - -
Pral4321g00002 845 MobiDBLite consensus disorder prediction 305 333 - -
Pral4321g00002 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Pral4321g00002 845 FunFam serine/threonine-protein kinase D6PK-like 689 812 - -
Pral4321g00002 845 CDD STKc_phototropin_like 459 817 - -
Pral4321g00002 845 MobiDBLite consensus disorder prediction 349 371 - -
Pral4321g00002 845 MobiDBLite consensus disorder prediction 401 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4321g00002 Pral-Chr4321 36900 41956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4321g00002 409 845 AGC Kinase Gene Family AT5G03640 65.502 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral4321g00002 Pkinase 4.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4321g00002 - - gmx:100789339 1209.51