Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4318g00022 ATGGGTAGGCCACCCAGCAACGGAGGCCCTGCCTTCCGCTTTACTCAGGCTGAGGTTGCAGAAATGGAAGCAATTTTGCAAGAGCATAACAATGCTATGCCAGCACGTGATGTTCTCACAGCTCTTGCAGAGAAGTTCAGTGAATCTCCTGACCGTAGAGGAAAGATTACTGTGCAGATGAAGCAAGTTTGGAACTGGTTTCAAAATAAACGATATGCTATAAGGGCAAAATCTAGTAAGGCTCCTGGAAAATTAAGTATCACTCCTATGGCTCGAGATGAGTCAACCCCACTTAGAAGTATGCCTCAGCCAGTGGCTGCTCCCATACCTCCTGCTTCAGTTTCAACTGTAAAAAGTGCTCCGGAAAACTCAGCAATGGAGTTTGAAGCTAAGTCTGGAAGGGATGGAGCATGGTACGATGTTGCAAACTTTCTATCCCACAGGCATTTGGAATCCAGTGATCCGGAAGTTATGGTCAGATTTGCTGGTTTTGGATCTGAGGAAGATGAGTGGATTAATGTGCGAAAAAATATCCGGCCACGCTCTCTGCCATGTGAATCATCAGAATGTGTGGCAGTTCTCCCAGGGGATCTCATACTGTGTTTTCAGGAAGGTAAGGAGCAGGCTCTTTATTTCGATGCTCATGTCCTTGATGCTCAAAGACGGAGGCATGATGTTAGAGGCTGCCGTTGTAGATTTCTGGTCCGTTATGATCATGATCAATCAGAGGAAATTGTTCCACTTAGGAAGGTTTGTCGTAGGCCCGAGACTGATTACAGGTTGCAACAACTTCACGCTATGAATGAGGCAGCACCTGTGGACCAGCAAAAGACCAGCATGGACTTAATGCCTGCTTATGCTGTCAGGGTAACAAGCTCAGCTGAAACGGTGCCAAAACAGCAGAGTGCAAACATTGCCATTGCCCCACAAGTTTTGCAAGCTACTGTTACTTTAGCCCCACAAACTATGAATGTGGATCAGAGAAAAGCTGAAGTAGCCAATGATATGACCGGAGGAAACACTGTTATCCGCCCAAGTGGTGCTGCATTTACCCCCAGTGTTGTTACCAGCAGTGTTCCCCCGCTGGTACGGCATTTCCCAGCAGTGTTCCGCTCAGTGGTACTGCATTTCCCAGCAATGTTGTTACAAGCAGTGTTCCAGTAG 1164 0.4716 MGRPPSNGGPAFRFTQAEVAEMEAILQEHNNAMPARDVLTALAEKFSESPDRRGKITVQMKQVWNWFQNKRYAIRAKSSKAPGKLSITPMARDESTPLRSMPQPVAAPIPPASVSTVKSAPENSAMEFEAKSGRDGAWYDVANFLSHRHLESSDPEVMVRFAGFGSEEDEWINVRKNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAMNEAAPVDQQKTSMDLMPAYAVRVTSSAETVPKQQSANIAIAPQVLQATVTLAPQTMNVDQRKAEVANDMTGGNTVIRPSGAAFTPSVVTSSVPPLVRHFPAVFRSVVLHFPAMLLQAVFQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4318g00022 387 Gene3D - 123 184 - -
Pral4318g00022 387 SMART HOX_1 7 81 IPR001356 GO:0003677
Pral4318g00022 387 Pfam SAWADEE domain 125 252 IPR032001 GO:0003682
Pral4318g00022 387 Gene3D - 10 84 - -
Pral4318g00022 387 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Pral4318g00022 387 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 330 IPR039276 -
Pral4318g00022 387 CDD homeodomain 13 75 IPR001356 GO:0003677
Pral4318g00022 387 SUPERFAMILY Homeodomain-like 4 77 IPR009057 -
Pral4318g00022 387 Gene3D - 185 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4318g00022 Pral-Chr4318 322264 329836 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral4318g00022 SAWADEE 1.8e-40 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4318g00022 - - qsa:O6P43_001009 544.658