Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4318g00004 ATGGGGGAGAGTGCCAATCATCACCACCGACCCGCAACGACGTCGTCGAGATTGGCGATGAGGGGTGGAGTGGGAGAGATCGTGGAGGTTCAAGGAGGCCACATTGTTCGCTCCACCGGTCGCAAAGACCGTCACAGTAAGGTTTGTACCGCGAAGGGACCAAGGGATCGGCGAGTTCGTCTCTCCGCTCATACCGCCATTCAATTCTACGACGTCCAAGACCGCCTTGGCTACGACCGCCCCAGTAAAGCCGTCGATTGGCTCATTAAGAATGCCAAGGCCGCCATAGATGACCTTGCTAAGCTTCCGGCATGGAACCCCAATACGGTAAATCAAAATGCCCAGCAAGAGCAGGAGCGAGAGCAGAATCAGATGGTAAGCGAGAATGTGAACGAGAACAAGAGCCCGATTGGAGTTCACCGTGCAGTGGCGGCGGCAGATACCATGGCTTCTGGTAGCCGGGAAACAAGTACGCATGCGGGAAGTGGCTGTCAGATTTTGGAGCAATTGGGTGAAAACCCTAACCGTGGTGGGTCGGCTTTTCTGCCGCCGACGCTGGGCACTGACATTGCTGACTCCATCAAGTCTTTCTTCCCGACTGGTGCGACGGCGGCGCCAGAGACAAATTCTTCGTCCATTCAGTTTCAGAATTACCCACCAGATTTGCTTTCGCGAAGTAGTAGCGCCTGCCAGAACCAAGATCTGCGGCTCTCGCTCCAGTCCTTCCAGGACCCGATTCTGCTTCACCAAGCTCAAAATCAGACTCAGCACCACCATCAACATCAACAGAACGAGCAGTTGTTCTCTGCAACGACCCCACTAGGGTTCGATGGGGCTTCTTTCCCAGACGAACACGGTCGATTGCATAGAATGGTAGCCTGGAATGGTGGTGCTGCTGACGCTGGCAATAGTGGCCACGGCGGAGGAGGAGGTTTCATCTTCAACTCGCCGTCGCCGATGCCGACTCTGCCGCCGCCGCTGTTCGGCCAGAGCCATTATCTTACTCAGAGGGGACCCCTTCAGTCCAGTAACCATCCTTCGATTCGTGCTTGGATAGACTCATCCACCACTGATCACCACCACCACCACTATCTTCCACCGACATTCCATCATCAGTCTGCTATCGCCGGCGGCATCGGATTTGACCCCGGTAGCTTCTCAGGTTTCCGCATCCCAGCACGAATCCAGGGTGAAGAGGAGCATGACGGCGTTTCTGATAAGCCGTCCCCTGCTTCCTCTGATTCTCGCCATTGA 1254 0.555 MGESANHHHRPATTSSRLAMRGGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDDLAKLPAWNPNTVNQNAQQEQEREQNQMVSENVNENKSPIGVHRAVAAADTMASGSRETSTHAGSGCQILEQLGENPNRGGSAFLPPTLGTDIADSIKSFFPTGATAAPETNSSSIQFQNYPPDLLSRSSSACQNQDLRLSLQSFQDPILLHQAQNQTQHHHQHQQNEQLFSATTPLGFDGASFPDEHGRLHRMVAWNGGAADAGNSGHGGGGGFIFNSPSPMPTLPPPLFGQSHYLTQRGPLQSSNHPSIRAWIDSSTTDHHHHHYLPPTFHHQSAIAGGIGFDPGSFSGFRIPARIQGEEEHDGVSDKPSPASSDSRH 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4318g00004 417 MobiDBLite consensus disorder prediction 394 417 - -
Pral4318g00004 417 Coils Coil 111 131 - -
Pral4318g00004 417 Pfam TCP family transcription factor 40 141 IPR017887 -
Pral4318g00004 417 MobiDBLite consensus disorder prediction 1 20 - -
Pral4318g00004 417 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 341 IPR005333 GO:0003700
Pral4318g00004 417 ProSiteProfiles TCP domain profile. 41 99 IPR017887 -
Pral4318g00004 417 MobiDBLite consensus disorder prediction 112 134 - -
Pral4318g00004 417 MobiDBLite consensus disorder prediction 309 347 - -
Pral4318g00004 417 MobiDBLite consensus disorder prediction 112 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4318g00004 Pral-Chr4318 89146 91396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4318g00004 8 417 TCP Transcription Factor Family AT3G15030 48.741 2.05e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4318g00004 TCP 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4318g00004 - - qsa:O6P43_001018 456.832