Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4317g00003 ATGGTTAACAGTGGGGTGTGCAGTCTCCGTACGCGTTGCCTACGTTTTCCTCCCCTCCCGGAGACACCGCTTTTTCCGCCACTTCGTTTCTCACTTACTTGCCGGTGCCGGCGGGCTCTGGTCACCGCGTCTGCTGTCTCTGAAACGTACAAGAAGAAGGAGACTAGAGAGAAAGTCATTGTGATTTCTGGACCCACTGGCGCCGGTAAAAGTCGGCTTGCATTGGAACTCGCTAAGCGGCTCAATGGAGAAATTGTGTACCAAGGTCTTGATGTTGGATCAGCTAAACCCTCCCCAAATGATAGAAAGGAGGTAAAACATCATCTGATTGACATATTGCATCCATCTAAAGACTACTCAGTTGGACAATTTTTTGAGGATGCAAGGCAAGCTACAAGATGTATCCTTGACAATGGCCGTGTTCCCATAGTTGTTGGGGGAACTGGGTTGTATTTACGATGGTTCATATATGGAAAACCAGATGTTCCCAAAGCTTCTGCATATGTCAAATCCAAAGTGTATTCAGAGTTAGCTGAACTACAGAAAAATGAAGATTGGGATGCTGCTGTGCAGTTGGTGGTAGATGCAGGTGATGCAAAGGCCCAAACTTTAGCAGTGAATGATTGGTATCGATTACGGCGTAGCCTAGAGATTATCAAATCTAGTGGATCACCTCCTTCTGCTTTTCGGGTGCCGTATGATTCTTTCAGGGAACTGGGTGATTCTAGTGATACCAATGGTTTTGAATCTTCCGATGTCAAAATTTCTGGCAATTCAGTGGAAGATTCCAAGTTCTCAGATTTGCCTTATGAGTTCATATGCTTTTTCCTTTCTAGTCAGAGGCTTGACCTATATAAAACAATCGACCAGCGGTGTGAAGATATGCTATTAGGAAGGGATGGGATTCTGTCTGAGGCTCGATGGCTTCTAAAGTTGGGTCTTCATCCCAACTCCAATTCTGCAACACGAGCAATCGGCTATAGACAAGCTATGGAATACCTACTTAGATGCCAACGACATGGAGGGCAGAGTTCAGCTGAAGAATTTTACAATTTTTTATCTGAATTTCAAAAAGAAACTAGGAATTTTGCAAAAAGACAATTGACATGGTTTCGCAATGATCATATTTACCACTGGCTCGATGCTTCCAAGCCACTGGATGCAATTATTGAATTCATTGACAATGCATATCATGATTGGAGTGGAAAGCTCGTTGTGCCTGAACACCTTAGAATGTCTAAAGATATATCTAATCGCCAAGAAGCTGCTCAACTTAAGTCTTACCGCACAAAAAATAGGCATTTCATGAAAGATGAAGATTGTTCTCGTATTCTGGAGTGGATAAGAAAGACTGAAGAATGA 1362 0.4317 MVNSGVCSLRTRCLRFPPLPETPLFPPLRFSLTCRCRRALVTASAVSETYKKKETREKVIVISGPTGAGKSRLALELAKRLNGEIVYQGLDVGSAKPSPNDRKEVKHHLIDILHPSKDYSVGQFFEDARQATRCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASAYVKSKVYSELAELQKNEDWDAAVQLVVDAGDAKAQTLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRELGDSSDTNGFESSDVKISGNSVEDSKFSDLPYEFICFFLSSQRLDLYKTIDQRCEDMLLGRDGILSEARWLLKLGLHPNSNSATRAIGYRQAMEYLLRCQRHGGQSSAEEFYNFLSEFQKETRNFAKRQLTWFRNDHIYHWLDASKPLDAIIEFIDNAYHDWSGKLVVPEHLRMSKDISNRQEAAQLKSYRTKNRHFMKDEDCSRILEWIRKTEE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4317g00003 453 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 57 386 IPR039657 -
Pral4317g00003 453 FunFam tRNA dimethylallyltransferase 9 160 231 - -
Pral4317g00003 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 179 IPR027417 -
Pral4317g00003 453 Gene3D - 56 444 IPR027417 -
Pral4317g00003 453 Pfam IPP transferase 86 374 - -
Pral4317g00003 453 Hamap tRNA dimethylallyltransferase [miaA]. 59 391 IPR018022 GO:0008033
Pral4317g00003 453 Gene3D - 161 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4317g00003 Pral-Chr4317 17045 23493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4317g00003 62 334 C2H2 Transcription Factor Family AT2G27760 23.958 3.89e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4317g00003 K00791 - qsa:O6P43_029165 676.011