Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4313g00003 ATGGCAGGGATTGGCCCTCTTACTCAGGATTGGGAGCCCGTTGTGATCCGGAAGAAGGCACCAACAGCGGCAGCGAAGAAAGATGAGAAAGCTGTCAACGCCGCTCGTCGCTCCGGCGCCGATATTGAAACCGTAAAAAAATTTAATGCTGCCACAAATAAAGCGGCCTCCAGCAGCACTTCTCTAAACACAAAGAAGCTCGATGAAGAAACTGAGAATCTTCATCATGAACGGGTTCCGACTGAATTAAAGAAAGCCATCATGCAGGCTAGGATGGAGAAAAAGCTTACCCAGGCTCAACTAGCTCAGGTGATAAATGAGAAGCCTCAAGTTATTCAGGAGTATGAATCAGGTAAAGCCATTCCAAATCAACAAATATTAGGTAAACTGGAGAGAGCTCTGGGTGCAAAACTGCGTGGAAAGAAATGA 429 0.4639 MAGIGPLTQDWEPVVIRKKAPTAAAKKDEKAVNAARRSGADIETVKKFNAATNKAASSSTSLNTKKLDEETENLHHERVPTELKKAIMQARMEKKLTQAQLAQVINEKPQVIQEYESGKAIPNQQILGKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4313g00003 142 Coils Coil 87 107 - -
Pral4313g00003 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 3 142 - -
Pral4313g00003 142 MobiDBLite consensus disorder prediction 65 81 - -
Pral4313g00003 142 MobiDBLite consensus disorder prediction 52 81 - -
Pral4313g00003 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Pral4313g00003 142 SMART mbf_short4 86 141 IPR001387 -
Pral4313g00003 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Pral4313g00003 142 CDD HTH_XRE 85 135 IPR001387 -
Pral4313g00003 142 FunFam Multiprotein bridging factor 1 71 142 - -
Pral4313g00003 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Pral4313g00003 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 138 IPR010982 GO:0003677
Pral4313g00003 142 Gene3D - 71 142 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4313g00003 Pral-Chr4313 21126 24646 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Pral4313g00003 MBF1 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4313g00003 K03627 - thj:104802969 235.343