Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00050 ATGAGATTTCCTAATTTGGAGAATTTGACATCCTTGCAATTCCTGGTGTTGAGAAATTGCTCCATCCATGATTTCATTCCAAATTACATTGGTAAAATGGAAGCCTTATCTACTCTAGATTTGAGCTTCAACAAGTTGACCGGTAAAATCCCAAACAATATAAATGATTTGACCAACCTAACGTACATGTTTCTAACTGAAAATTGTCTGAGTGGAAAAATTCCTGAATGGATAGTGCAAAACAAATTTGATTATTTTGATCTATCTTACAACAATTTTTCCGAGACTTCAACACCTAATTGTCAGTACAATAATATAAACTTGGCTTCGAGCCTATCATCTTCAGCAAACACCACAAGTACTTGCCTGAAAAGGGGCCTTCCTTGTGGAGGAAAACCCAAGTATCATTCATTGTTCATAAATTGTGGAGGACCAGAAATTGAATATGACGGAAATAAATACGAAGCCGACACAAATCCTGGGAGTATCTCATACTTTTTTGCTAGTGATGATGAGAAATGGGCTTATAGCAGCACAGGAGTAGTATACTTCAGAAGATATGATAATTATTACATGGCAAAAAATAGATATTCTCTCAACATTACCGGTCCAGGATTCTACCAAACAGCTCGTTTATCCCCTTTGTCTCTTAAGTACTATGGCCTCTGTATGATTAATGGAAATTACAACGTCAAATTACACTTTGCTGAGATTATGCTCTCTCATGACCAAAATTTCAGCAGCCTAGGAAGCCGCATATTTGATGTTTCAATTCAAAGTAAGCAATATTTGAGTGATTTCAACATTATGAAGGAAGCTAATGGCGTAGGTAATGGCATAGTTAAGGAATTTAACATTGATGTCACTAATAACACCTTGGGGATTCATTTATATTATAGACAGAAAGGAACTAGCTCTGTTCCCGATTATGGTGCATTTGGACCTCTTATATCTGCTATTTCAGTCACCCCAAACTTCAAAATTCCTTCAGAAAGGCTTTCTACTGGAGCTATTGCTGGAATTGTGGTTGGATCATGTGTATTCCTCATTCTAATAGTATTCATCCTTCAAAAGATGGGTTTTCTAGGTGGCAAAGATTCAAAACACAAACAACTTTTGGATTTAAAAACAAGTTATTTCTCTTTAAAACAAATCAATGATGCAACTAATAACTTCGCCCCAGAAAATAAGATTGGCGAAGGAGGTTTTGGACCGGTGTACAAGGGTATACTTTCAAATGGTATTGCAATAGCTGTGAAAAAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATATTTGCTTTGCAACACCCAAACCTTGTAAAGCTTTATGGATGTTGTGTTGAAGGAAACCAATTGTTGTTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGTGCTCTTTTTGGTGGCCAAGGACAAAAGATGCATTTGGACTGGCCCACAAGAATGAAGATATGCATAGGAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATTTCAGATTTCGGATTAGCCAAACTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCCGGAACAATGTCAGTACTCTACTACATATTTTCACTATATCAAATTTCAAATTTGGTATAA 1725 0.3588 MRFPNLENLTSLQFLVLRNCSIHDFIPNYIGKMEALSTLDLSFNKLTGKIPNNINDLTNLTYMFLTENCLSGKIPEWIVQNKFDYFDLSYNNFSETSTPNCQYNNINLASSLSSSANTTSTCLKRGLPCGGKPKYHSLFINCGGPEIEYDGNKYEADTNPGSISYFFASDDEKWAYSSTGVVYFRRYDNYYMAKNRYSLNITGPGFYQTARLSPLSLKYYGLCMINGNYNVKLHFAEIMLSHDQNFSSLGSRIFDVSIQSKQYLSDFNIMKEANGVGNGIVKEFNIDVTNNTLGIHLYYRQKGTSSVPDYGAFGPLISAISVTPNFKIPSERLSTGAIAGIVVGSCVFLILIVFILQKMGFLGGKDSKHKQLLDLKTSYFSLKQINDATNNFAPENKIGEGGFGPVYKGILSNGIAIAVKKLSSKSKQGNREFVNEIGMIFALQHPNLVKLYGCCVEGNQLLLIYEYMENNSLASALFGGQGQKMHLDWPTRMKICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTMSVLYYIFSLYQISNLV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00050 574 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 4 96 - -
Pral4311g00050 574 ProSiteProfiles Protein kinase domain profile. 392 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00050 574 Gene3D Transferase(Phosphotransferase) domain 1 468 563 - -
Pral4311g00050 574 Pfam Leucine rich repeat 35 93 IPR001611 GO:0005515
Pral4311g00050 574 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 363 467 - -
Pral4311g00050 574 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 560 - -
Pral4311g00050 574 FunFam Os07g0541700 protein 468 557 - -
Pral4311g00050 574 Pfam Malectin domain 138 320 IPR021720 -
Pral4311g00050 574 SMART serkin_6 392 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00050 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Pral4311g00050 574 SUPERFAMILY Protein kinase-like (PK-like) 374 558 IPR011009 -
Pral4311g00050 574 SUPERFAMILY L domain-like 5 107 - -
Pral4311g00050 574 Gene3D - 136 325 - -
Pral4311g00050 574 Gene3D Phosphorylase Kinase; domain 1 360 467 - -
Pral4311g00050 574 Gene3D Ribonuclease Inhibitor 3 126 IPR032675 -
Pral4311g00050 574 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 135 325 - -
Pral4311g00050 574 Pfam Protein tyrosine and serine/threonine kinase 395 549 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00050 Pral-Chr4311 720538 725016 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00050 4 78 Receptor kinase-like Gene Family AT1G53440 34.667 8.59e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00050 Malectin 8.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00050 - - adu:107459475 749.584