Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00049 ATGGCGCCTGAATATGCAATGCGAGGATACTTGACTGACAAAGCAGATGTTTATAGTTTCGGAGTTGTTATTTTAGAAATTGTCAGTGGAAAAGGCAACACAAGTTACATGCCAAAAGAAGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTCCAAAAGCAAGGAAACCTTCTTGAACTAGTGGATTCAAATCTTGGTTCAAGCTATTCCTCACAAGAAGCCATGAAAATGCTGGAGTTGGCACTCATATGCACTAGCCCATCTCCAACTCTGAGGCCATCCATGTCCTCTGCTGTTAGCATGCTTGAAGGAAAGTTGCCAATCCAAGCCCTAACAATCAAACATCGAGAGAATGACCAGGATGTGAGATTCAAGGCCTTTGGAATACAATCATCTTAA 402 0.4154 MAPEYAMRGYLTDKADVYSFGVVILEIVSGKGNTSYMPKEEFVYLLDWAYVLQKQGNLLELVDSNLGSSYSSQEAMKMLELALICTSPSPTLRPSMSSAVSMLEGKLPIQALTIKHRENDQDVRFKAFGIQSS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00049 133 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00049 133 Gene3D Transferase(Phosphotransferase) domain 1 1 130 - -
Pral4311g00049 133 Pfam Protein tyrosine and serine/threonine kinase 1 98 IPR001245 GO:0004672|GO:0006468
Pral4311g00049 133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 128 - -
Pral4311g00049 133 SUPERFAMILY Protein kinase-like (PK-like) 1 109 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00049 Pral-Chr4311 719941 720442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00049 1 128 Receptor kinase-like Gene Family AT1G53430 72.727 3.00e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00049 PK_Tyr_Ser-Thr 4.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00049 - - gmx:100815226 215.698