Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00048 ATGGAGTTTGGGATCTCAATCTCTAAACTTTTATATCTTTTCTTATTTGGATGTTTCGCTTTGAAAGCTTTCACAAACTGTGGATCCGATGCTCAACTCATACTAGAAGATGAAGTGAAAGTTCTAAAAACAATATCATCGAAGATAGAGAACTTGAATTGGGATGTGACCCAACATTCTTGTGTCGATGGAAGCTTCAAAAATGAGACCATTACAGCGGATAGCTTCACAAGGAATGTAATATGCGATTGCAAATTCTCAAATGGAAAAGTTTGTCATGTTACAAAGATCATTGCCACGGGTCTCAACTTATCGGGACTTTTACCAAGTGAATTTGGATTCCTTACCTATCTGCAAGAACTTGATTTGTCTCACAATTATCTAAATGGATCAATCCCAAGGAGCTTTGGTAGACTCCCTCTTGTTACATTACGCCTTACGGCTAACGCAATCAGTGGCTCAATTCCAGACGCTTTTGGTGAAATTACATCTTTAGAGAATTTAGAGTTGAAAGATAATCTATTAGAAGGGACTCTTCCTTCTAGCCTCGGAAAATTGATGCAGCTACGCAAGTTGGATCTTTCTGGAAATAACTTCTTAGGGACAATACCCGAAAGTTTTGGTAATCTGAAAAAACTAGAATCTATTTATTTAGATGGGACCAATATATCAGGAAAATTATCCAATTTTATTGGGAATTGGACCCAACTCCAAGAAATGTCCCTGGAGGGAACGTCCATGGAAGGCCCCATTCCTACAATCATATCTCACTTAACAAATTTGTCTGAACTGAGAATATCTGATTTGCATGGACCAGCGATAATGAGATTTCCTAATCTGGAGAATTTGACATCCTTGCGGCGCCTGGTGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTATATAGAGTAGATTTGAGCTTCAACAAGTTGACCGGTATAATCCCAAACAATATAAGTAACTTGACTGCCCTATATTACATGATTCTAACTGAAAATTCCCTGACCGGAAAATTTCCTGATTGGATATTGCAACAGCAATACAATTATGGTTCTTTTGATTTATCTTACAACAATTTTTCGGAGACCTCTGCGACTAATTGTCAGTACGAAAACTTAAACTTGGTTTCGAGTCTATCATCTTCAGCAAACACATTATGCACTTGCTTGAAAAGGGGGCTTCCTTGTGGAAGAAAACCAAAGTATCATTCATTGTTCATAAACTGTGGTGGACCAGAAATTAAATATGAGGGGAATAAATATGAAGGCGATATCAATTCTCAGGATACCTCATTCTTTTGCCCCGGTGATGATAAATGGGCTTATAGCAGCACAGCAGGAATAACAACATACTATAATCACATAGCAAAAAATAGATTTTCCCTCAACATTACTGGTCCTGACTTTTACCAAACAGCTCGCATTTCCCCTCTGTCTCTCAAGTACCATGGCCTCTGTATGATTAATGGAAATTACAATGTCAAGCTATATTTTGCTGAGATTATGTATTCTCATGACCAAAATTTCAATAACCTTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGGAAATATTTGCATGATTTCAACATTATCAGGGAAGCTGGTGGCGTTGGTAAGGGCATTGTCAAGGACTTTAATGTTGATGTTAATGATAACACCTTGGAGATTCATTTGTATTGGGCTCGAAAAGGAACTAGTTCTATTCCTAATGATAATAACAGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATTTCAATATTCCTTGGATTTCTGGGGGAGGCATTGCTGGAATTGTGGTTGGATCGTATGTGTTCCTCATCATACTAATAATAATATTCATCCTCCGACGAATGGGCTTACTAGGTGACAGACGTTCAAAAGACAAACAACTTTTAGATTTAAAAACAGGTTATTTCTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGCCCTAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGCACAAGGGTATACTATCAAATGGAGTTGTCATAGCTGTGAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAACTTTATGGATGTTGCGTTGAAGAAAACCAATTGCTGCTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGAGCTCTTTTTGGTGGTCAAGGACAAAAGATACATTTGGACTGGCCTACAAGAATGAAGATATGCGTAGGAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGCTGAAAATTGTGCACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATCTCCTGA 2502 0.3737 MEFGISISKLLYLFLFGCFALKAFTNCGSDAQLILEDEVKVLKTISSKIENLNWDVTQHSCVDGSFKNETITADSFTRNVICDCKFSNGKVCHVTKIIATGLNLSGLLPSEFGFLTYLQELDLSHNYLNGSIPRSFGRLPLVTLRLTANAISGSIPDAFGEITSLENLELKDNLLEGTLPSSLGKLMQLRKLDLSGNNFLGTIPESFGNLKKLESIYLDGTNISGKLSNFIGNWTQLQEMSLEGTSMEGPIPTIISHLTNLSELRISDLHGPAIMRFPNLENLTSLRRLVLRNCSIHDSIPNYIGKMENLYRVDLSFNKLTGIIPNNISNLTALYYMILTENSLTGKFPDWILQQQYNYGSFDLSYNNFSETSATNCQYENLNLVSSLSSSANTLCTCLKRGLPCGRKPKYHSLFINCGGPEIKYEGNKYEGDINSQDTSFFCPGDDKWAYSSTAGITTYYNHIAKNRFSLNITGPDFYQTARISPLSLKYHGLCMINGNYNVKLYFAEIMYSHDQNFNNLGRRIFDVSIQGRKYLHDFNIIREAGGVGKGIVKDFNVDVNDNTLEIHLYWARKGTSSIPNDNNSVYGPLISAISVTPNFNIPWISGGGIAGIVVGSYVFLIILIIIFILRRMGLLGDRRSKDKQLLDLKTGYFSLKQIKDATNNFALENKIGEGGFGPVHKGILSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEENQLLLIYEYMENNSLARALFGGQGQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIS 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00048 833 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 599 - -
Pral4311g00048 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Pral4311g00048 833 Pfam Protein tyrosine and serine/threonine kinase 668 822 IPR001245 GO:0004672|GO:0006468
Pral4311g00048 833 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 637 741 - -
Pral4311g00048 833 Gene3D Transferase(Phosphotransferase) domain 1 742 833 - -
Pral4311g00048 833 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 832 - -
Pral4311g00048 833 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Pral4311g00048 833 Gene3D Phosphorylase Kinase; domain 1 635 741 - -
Pral4311g00048 833 Gene3D - 412 599 - -
Pral4311g00048 833 Pfam Leucine Rich Repeat 309 331 IPR001611 GO:0005515
Pral4311g00048 833 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515
Pral4311g00048 833 SUPERFAMILY L domain-like 52 397 - -
Pral4311g00048 833 Gene3D Ribonuclease Inhibitor 275 401 IPR032675 -
Pral4311g00048 833 Pfam Malectin domain 414 594 IPR021720 -
Pral4311g00048 833 SMART serkin_6 666 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00048 833 Gene3D Ribonuclease Inhibitor 168 274 IPR032675 -
Pral4311g00048 833 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 84 273 - -
Pral4311g00048 833 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 372 - -
Pral4311g00048 833 Gene3D Ribonuclease Inhibitor 40 164 IPR032675 -
Pral4311g00048 833 FunFam Os07g0541700 protein 742 831 - -
Pral4311g00048 833 SUPERFAMILY Protein kinase-like (PK-like) 650 832 IPR011009 -
Pral4311g00048 833 ProSiteProfiles Protein kinase domain profile. 666 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00048 Pral-Chr4311 666680 676508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00048 1 832 Receptor kinase-like Gene Family AT1G53440 53.191 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00048 Malectin 1.6e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00048 - - gmx:121173337 981.089