Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00046 ATGGAGTTTGGGATCTCAATCTCTAAACTTTTATATCTTTTCTTATTTGGATGTTTCGCTTTGAAAGCTTTCACAAACTGTGGATCCGATGCTCAACTCATACTAGAAGATGAAGTGAAAGTTCTAAAAACAATATCATCGAAGATAGAGAACTTGAATTGGGATGTGACCCAACATTCTTGTGTCGATGGAAGCTTCAAAAATGAGACCATTACAGCGGATAGCTTCACAAGGAATGTAATATGCGATTGCAAATTCTCAAATGGAAAAGTTTGTCATGTTACAAAGATCATTGCCACGGGTCTCAACTTATCGGGACTTTTACCAAGTGAATTTGGATTCCTTACCTATCTGCAAGAACTTGATTTGTCTCACAATTATCTAAATGGATCAATCCCAAGGAGCTTTGGTAGACTCCCTCTTGTTACATTACGCCTTACGGCTAACGCAATCAGTGGCTCAATTCCAGACGCTTTTGGTGAAATTACATCTTTAGAGAATTTAGAGTTGAAAGATAATCTATTAGAAGGGACTCTTCCTTCTAGCCTCGGAAAATTGATGCAGCTACGCAAGTTGGATCTTTCTGGAAATAACTTCTTAGGGACAATACCCGAAAGTTTTGGTAATCTGAAAAAACTAGAATCTATTTATTTAGATGGGACCAATATATCAGGAAAATTATCCAATTTTATTGGGAATTGGACCCAACTCCAAGAAATGTCCCTGGAGGGAACGTCCATGGAAGGCCCCATTCCTACAATCATATCTCACTTAACAAATTTGTCTGAACTGAGAATATCTGATTTGCATGGACCAGCGATAATGAGATTTCCTAATCTGGAGAATTTGACATCCTTGCGGCGCCTGGTGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTATATAGAGTAGATTTGAGCTTCAACAAGTTGACCGGTATAATCCCAAACAATATAAGTAACTTGACTGCCCTATATTACATGATTCTAACTGAAAATTCCCTGACCGGAAAATTTCCTGATTGGATATTGCAACAGCAATACAATTATGGTTCTTTTGATTTATCTTACAACAATTTTTCGGAGACCTCTGCGACTAATTGTCAGTACGAAAACTTAAACTTGGTTTCGAGTCTATCATCTTCAGCAAACACATTATGCACTTGCTTGAAAAGGGGGCTTCCTTGTGGAAGAAAACCAAAGTATCATTCATTGTTCATAAACTGTGGTGGACCAGAAATTAAATATGAGGGGAATAAATATGAAGGCGATATCAATTCTCAGGATACCTCATTCTTTTGCCCCGGTGATGATAAATGGGCTTATAGCAGCACAGCAGGAATAACAACATACTATAATCACATAGCAAAAAATAGATTTTCCCTCAACATTACTGGTCCTGACTTTTACCAAACAGCTCGCATTTCCCCTCTGTCTCTCAAGTACCATGGCCTCTGTATGATTAATGGAAATTACAATGTCAAGCTATATTTTGCTGAGATTATGTATTCTCATGACCAAAATTTCAATAACCTTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGGAAATATTTGCATGATTTCAACATTATCAGGGAAGCTGGTGGCGTTGGTAAGGGCATTGTCAAGGACTTTAATGTTGATGTTAATGATAACACCTTGGAGATTCATTTGTATTGGGCTCGAAAAGGAACTAGTTCTATTCCTAATGATAATAACAGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATTTCAATATTCCTTGGATTTCTGGGGGAGGCATTGCTGGAATTGTGGTTGGATCGTATGTGTTCCTCATCATACTAATAATAATATTCATCCTCCGACGAATGGGCTTACTAGGTGACAGACGTTCAAAAGACAAACAACTTTTAGATTTAAAAACAGGTTATTTCTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGCCCTAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGCACAAGGGTATACTATCAAATGGAGTTGTCATAGCTGTGAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAACTTTATGGATGTTGCGTTGAAGAAAACCAATTGCTGCTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGAGCTCTTTTTGGTGGTCAAGGACAAAAGATACATTTGGACTGGCCTACAAGAATGAAGATATGCGTAGGAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGCTGAAAATTGTGCACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATTGGTTATATAGCTCCTGAATATGCAATGCGAGGACACTTAACTGAGAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGCAACACAAGTTACAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGCTAGTGGATCCAAGCCTTGGTTCAAGCTACTCCTTACAGGAAGTCACGAGAATGCTGGAGCTGGCACTCCTATGTACTAACCCATCTCCAACTCTAAGGCCATCCATGTCCTCTGTTGTTGACATGCTTGAAGGAAAGTTGCCAATCCAAACCCTAGCAACCAAACGTCAGGAGAGTGACCAACAAGTTGCCAAATTCAAGGCCTTTGAGATACAATTATCTCAAGAAAGCTATAGCCAAATCTTTAGTTCTTCTTCTATATCAAGATCACACGAAAATGTGAAGTAA 2970 0.3795 MEFGISISKLLYLFLFGCFALKAFTNCGSDAQLILEDEVKVLKTISSKIENLNWDVTQHSCVDGSFKNETITADSFTRNVICDCKFSNGKVCHVTKIIATGLNLSGLLPSEFGFLTYLQELDLSHNYLNGSIPRSFGRLPLVTLRLTANAISGSIPDAFGEITSLENLELKDNLLEGTLPSSLGKLMQLRKLDLSGNNFLGTIPESFGNLKKLESIYLDGTNISGKLSNFIGNWTQLQEMSLEGTSMEGPIPTIISHLTNLSELRISDLHGPAIMRFPNLENLTSLRRLVLRNCSIHDSIPNYIGKMENLYRVDLSFNKLTGIIPNNISNLTALYYMILTENSLTGKFPDWILQQQYNYGSFDLSYNNFSETSATNCQYENLNLVSSLSSSANTLCTCLKRGLPCGRKPKYHSLFINCGGPEIKYEGNKYEGDINSQDTSFFCPGDDKWAYSSTAGITTYYNHIAKNRFSLNITGPDFYQTARISPLSLKYHGLCMINGNYNVKLYFAEIMYSHDQNFNNLGRRIFDVSIQGRKYLHDFNIIREAGGVGKGIVKDFNVDVNDNTLEIHLYWARKGTSSIPNDNNSVYGPLISAISVTPNFNIPWISGGGIAGIVVGSYVFLIILIIIFILRRMGLLGDRRSKDKQLLDLKTGYFSLKQIKDATNNFALENKIGEGGFGPVHKGILSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEENQLLLIYEYMENNSLARALFGGQGQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYIAPEYAMRGHLTEKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSLQEVTRMLELALLCTNPSPTLRPSMSSVVDMLEGKLPIQTLATKRQESDQQVAKFKAFEIQLSQESYSQIFSSSSISRSHENVK 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00046 989 Pfam Protein tyrosine and serine/threonine kinase 668 936 IPR001245 GO:0004672|GO:0006468
Pral4311g00046 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Pral4311g00046 989 SMART serkin_6 666 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00046 989 Pfam Leucine Rich Repeat 309 331 IPR001611 GO:0005515
Pral4311g00046 989 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515
Pral4311g00046 989 Gene3D - 412 599 - -
Pral4311g00046 989 SUPERFAMILY Protein kinase-like (PK-like) 650 938 IPR011009 -
Pral4311g00046 989 Gene3D Phosphorylase Kinase; domain 1 635 741 - -
Pral4311g00046 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 974 - -
Pral4311g00046 989 CDD STKc_IRAK 672 939 - -
Pral4311g00046 989 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 372 - -
Pral4311g00046 989 ProSiteProfiles Protein kinase domain profile. 666 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00046 989 Gene3D Transferase(Phosphotransferase) domain 1 742 965 - -
Pral4311g00046 989 Gene3D Ribonuclease Inhibitor 46 201 IPR032675 -
Pral4311g00046 989 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 599 - -
Pral4311g00046 989 SUPERFAMILY L domain-like 52 397 - -
Pral4311g00046 989 Gene3D Ribonuclease Inhibitor 270 401 IPR032675 -
Pral4311g00046 989 FunFam Putative LRR receptor-like serine/threonine-protein kinase 742 949 - -
Pral4311g00046 989 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 83 274 - -
Pral4311g00046 989 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Pral4311g00046 989 Pfam Malectin domain 414 594 IPR021720 -
Pral4311g00046 989 Gene3D Ribonuclease Inhibitor 202 269 IPR032675 -
Pral4311g00046 989 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 637 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00046 Pral-Chr4311 665927 676508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00046 1 987 Receptor kinase-like Gene Family AT1G53440 55.434 0.0 1060
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00046 PK_Tyr_Ser-Thr 3.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00046 - - gmx:121173337 1192.18