Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00045 ATGGAGTTTGGGATCTCAATCTCTAAACTTTTATATCTTTTCTTATTTGGATGTTTCGCTTTGAAAGCTTTCACAAACTGTGGATCCGATGCTCAACTCATACTAGAAGATGAAGTGAAAGTTCTAAAAACAATATCATCGAAGATAGAGAACTTGAATTGGGATGTGACCCAACATTCTTGTGTCGATGGAAGCTTCAAAAATGAGACCATTACAGCGGATAGCTTCACAAGGAATGTAATATGCGATTGCAAATTCTCAAATGGAAAAGTTTGTCATGTTACAAAGATCATTGCCACGGGTCTCAACTTATCGGGACTTTTACCAAGTGAATTTGGATTCCTTACCTATCTGCAAGAACTTGATTTGTCTCACAATTATCTAAATGGATCAATCCCAAGGAGCTTTGGTAGACTCCCTCTTGTTACATTACGCCTTACGGCTAACGCAATCAGTGGCTCAATTCCAGACGCTTTTGGTGAAATTACATCTTTAGAGAATTTAGAGTTGAAAGATAATCTATTAGAAGGGACTCTTCCTTCTAGCCTCGGAAAATTGATGCAGCTACGCAAGTTGGATCTTTCTGGAAATAACTTCTTAGGGACAATACCCGAAAGTTTTGGTAATCTGAAAAAACTAGAATCTATTTATTTAGATGGGACCAATATATCAGGAAAATTATCCAATTTTATTGGGAATTGGACCCAACTCCAAGAAATGTCCCTGGAGGGAACGTCCATGGAAGGCCCCATTCCTACAATCATATCTCACTTAACAAATTTGTCTGAACTGAGAATATCTGATTTGCATGGACCAGCGATAATGAGATTTCCTAATCTGGAGAATTTGACATCCTTGCGGCGCCTGGTGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTATATAGAGTAGATTTGAGCTTCAACAAGTTGACCGGTATAATCCCAAACAATATAAGTAACTTGACTGCCCTATATTACATGATTCTAACTGAAAATTCCCTGACCGGAAAATTTCCTGATTGGATATTGCAACAGCAATACAATTATGGTTCTTTTGATTTATCTTACAACAATTTTTCGGAGACCTCTGCGACTAATTGTCAGTACGAAAACTTAAACTTGGTTTCGAGTCTATCATCTTCAGCAAACACATTATGCACTTGCTTGAAAAGGGGGCTTCCTTGTGGAAGAAAACCAAAGTATCATTCATTGTTCATAAACTGTGGTGGACCAGAAATTAAATATGAGGGGAATAAATATGAAGGCGATATCAATTCTCAGGATACCTCATTCTTTTGCCCCGGTGATGATAAATGGGCTTATAGCAGCACAGCAGGAATAACAACATACTATAATCACATAGCAAAAAATAGATTTTCCCTCAACATTACTGGTCCTGACTTTTACCAAACAGCTCGCATTTCCCCTCTGTCTCTCAAGTACCATGGCCTCTGTATGATTAATGGAAATTACAATGTCAAGCTATATTTTGCTGAGATTATGTATTCTCATGACCAAAATTTCAATAACCTTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGGAAATATTTGCATGATTTCAACATTATCAGGGAAGCTGGTGGCGTTGGTAAGGGCATTGTCAAGGACTTTAATGTTGATGTTAATGATAACACCTTGGAGATTCATTTGTATTGGGCTCGAAAAGGAACTAGTTCTATTCCTAATGATAATAACAGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATTTCAATATTCCTTGGATTTCTGGGGGAGGCATTGCTGGAATTGTGGTTGGATCGTATGTGTTCCTCATCATACTAATAATAATATTCATCCTCCGACGAATGGGCTTACTAGGTGACAGACGTTCAAAAGACAAACGTGGTCAAGGACAAAAGATACATTTGGACTGGCCTACAAGAATGAAGATATGCGTAGGAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGCTGAAAATTGTGCACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATTGGTTATATAGCTCCTGAATATGCAATGCGAGGACACTTAACTGAGAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGCAACACAAGTTACAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGCTAGTGGATCCAAGCCTTGGTTCAAGCTACTCCTTACAGGAAGTCACGAGAATGCTGGAGCTGGCACTCCTATGTACTAACCCATCTCCAACTCTAAGGCCATCCATGTCCTCTGTTGTTGACATGCTTGAAGGAAAGTTGCCAATCCAAACCCTAGCAACCAAACGTCAGGAGAGTGACCAACAAGTTGCCAAATTCAAGGCCTTTGAGATACAATTATCTCAAGAAAGCTATAGCCAAATCTTTAGTTCTTCTTCTATATCAAGATCACACGAAAATGTGAAGTAA 2646 0.3825 MEFGISISKLLYLFLFGCFALKAFTNCGSDAQLILEDEVKVLKTISSKIENLNWDVTQHSCVDGSFKNETITADSFTRNVICDCKFSNGKVCHVTKIIATGLNLSGLLPSEFGFLTYLQELDLSHNYLNGSIPRSFGRLPLVTLRLTANAISGSIPDAFGEITSLENLELKDNLLEGTLPSSLGKLMQLRKLDLSGNNFLGTIPESFGNLKKLESIYLDGTNISGKLSNFIGNWTQLQEMSLEGTSMEGPIPTIISHLTNLSELRISDLHGPAIMRFPNLENLTSLRRLVLRNCSIHDSIPNYIGKMENLYRVDLSFNKLTGIIPNNISNLTALYYMILTENSLTGKFPDWILQQQYNYGSFDLSYNNFSETSATNCQYENLNLVSSLSSSANTLCTCLKRGLPCGRKPKYHSLFINCGGPEIKYEGNKYEGDINSQDTSFFCPGDDKWAYSSTAGITTYYNHIAKNRFSLNITGPDFYQTARISPLSLKYHGLCMINGNYNVKLYFAEIMYSHDQNFNNLGRRIFDVSIQGRKYLHDFNIIREAGGVGKGIVKDFNVDVNDNTLEIHLYWARKGTSSIPNDNNSVYGPLISAISVTPNFNIPWISGGGIAGIVVGSYVFLIILIIIFILRRMGLLGDRRSKDKRGQGQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYIAPEYAMRGHLTEKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSLQEVTRMLELALLCTNPSPTLRPSMSSVVDMLEGKLPIQTLATKRQESDQQVAKFKAFEIQLSQESYSQIFSSSSISRSHENVK 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00045 881 Gene3D Ribonuclease Inhibitor 40 203 IPR032675 -
Pral4311g00045 881 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 599 - -
Pral4311g00045 881 Gene3D Transferase(Phosphotransferase) domain 1 639 857 - -
Pral4311g00045 881 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 372 - -
Pral4311g00045 881 FunFam Putative LRR receptor-like serine/threonine-protein kinase 639 841 - -
Pral4311g00045 881 SUPERFAMILY Protein kinase-like (PK-like) 649 830 IPR011009 -
Pral4311g00045 881 Pfam Malectin domain 414 594 IPR021720 -
Pral4311g00045 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Pral4311g00045 881 SMART serkin_6 539 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00045 881 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 83 274 - -
Pral4311g00045 881 ProSiteProfiles Protein kinase domain profile. 539 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00045 881 Gene3D Ribonuclease Inhibitor 273 401 IPR032675 -
Pral4311g00045 881 Gene3D - 412 599 - -
Pral4311g00045 881 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 629 - -
Pral4311g00045 881 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Pral4311g00045 881 Gene3D Ribonuclease Inhibitor 204 272 IPR032675 -
Pral4311g00045 881 Pfam Protein tyrosine and serine/threonine kinase 649 828 IPR001245 GO:0004672|GO:0006468
Pral4311g00045 881 Pfam Leucine Rich Repeat 309 331 IPR001611 GO:0005515
Pral4311g00045 881 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515
Pral4311g00045 881 SUPERFAMILY L domain-like 52 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00045 Pral-Chr4311 665927 676508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00045 647 879 Receptor kinase-like Gene Family AT1G53440 73.191 5.77e-106 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00045 PK_Tyr_Ser-Thr 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00045 - - egr:104451553 766.918