Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00044 ATGGAGTTTGGGATCTCAATCTCTAAACTTTTATATCTTTTCTTATTTGGATGTTTCGCTTTGAAAGCTTTCACAAACTGTGGATCCGATGCTCAACTCATACTAGAAGATGAAGTGAAAGTTCTAAAAACAATATCATCGAAGATAGAGAACTTGAATTGGGATGTGACCCAACATTCTTGTGTCGATGGAAGCTTCAAAAATGAGACCATTACAGCGGATAGCTTCACAAGGAATGTAATATGCGATTGCAAATTCTCAAATGGAAAAGTTTGTCATGTTACAAAGATCATTGCCACGGGTCTCAACTTATCGGGACTTTTACCAAGTGAATTTGGATTCCTTACCTATCTGCAAGAACTTGATTTGTCTCACAATTATCTAAATGGATCAATCCCAAGGAGCTTTGGTAGACTCCCTCTTGTTACATTACGCCTTACGGCTAACGCAATCAGTGGCTCAATTCCAGACGCTTTTGGTGAAATTACATCTTTAGAGAATTTAGAGTTGAAAGATAATCTATTAGAAGGGACTCTTCCTTCTAGCCTCGGAAAATTGATGCAGCTACGCAAGTTGGATCTTTCTGGAAATAACTTCTTAGGGACAATACCCGAAAGTTTTGGTAATCTGAAAAAACTAGAATCTATTTATTTAGATGGGACCAATATATCAGGAAAATTATCCAATTTTATTGGGAATTGGACCCAACTCCAAGAAATGTCCCTGGAGGGAACGTCCATGGAAGGCCCCATTCCTACAATCATATCTCACTTAACAAATTTGTCTGAACTGAGAATATCTGATTTGCATGGACCAGCGATAATGAGATTTCCTAATCTGGAGAATTTGACATCCTTGCGGCGCCTGGTGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTATATAGAGTAGATTTGAGCTTCAACAAGTTGACCGGTATAATCCCAAACAATATAAGTAACTTGACTGCCCTATATTACATGATTCTAACTGAAAATTCCCTGACCGGAAAATTTCCTGATTGGATATTGCAACAGCAATACAATTATGGTTCTTTTGATTTATCTTACAACAATTTTTCGGAGACCTCTGCGACTAATTGTCAGTACGAAAACTTAAACTTGGTTTCGAGTCTATCATCTTCAGCAAACACATTATGCACTTGCTTGAAAAGGGGGCTTCCTTGTGGAAGAAAACCAAAGTATCATTCATTGTTCATAAACTGTGGTGGACCAGAAATTAAATATGAGGGGAATAAATATGAAGGCGATATCAATTCTCAGGATACCTCATTCTTTTGCCCCGGTGATGATAAATGGGCTTATAGCAGCACAGCAGGAATAACAACATACTATAATCACATAGCAAAAAATAGATTTTCCCTCAACATTACTGGTCCTGACTTTTACCAAACAGCTCGCATTTCCCCTCTGTCTCTCAAGTACCATGGCCTCTGTATGATTAATGGAAATTACAATGTCAAGCTATATTTTGCTGAGATTATGTATTCTCATGACCAAAATTTCAATAACCTTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGGAAATATTTGCATGATTTCAACATTATCAGGGAAGCTGGTGGCGTTGGTAAGGGCATTGTCAAGGACTTTAATGTTGATGTTAATGATAACACCTTGGAGATTCATTTGTATTGGGCTCGAAAAGGAACTAGTTCTATTCCTAATGATAATAACAGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAAACTTTTAGATTTAAAAACAGGTTATTTCTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGCCCTAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGCACAAGGGTATACTATCAAATGGAGTTGTCATAGCTGTGAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAACTTTATGGATGTTGCGTTGAAGAAAACCAATTGCTGCTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGAGCTCTTTTTGGTGGTCAAGGACAAAAGATACATTTGGACTGGCCTACAAGAATGAAGATATGCGTAGGAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGCTGAAAATTGTGCACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATTGGTTATATAGCTCCTGAATATGCAATGCGAGGACACTTAACTGAGAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGCAACACAAGTTACAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGCTAGTGGATCCAAGCCTTGGTTCAAGCTACTCCTTACAGGAAGTCACGAGAATGCTGGAGCTGGCACTCCTATGTACTAACCCATCTCCAACTCTAAGGCCATCCATGTCCTCTGTTGTTGACATGCTTGAAGGAAAGTTGCCAATCCAAACCCTAGCAACCAAACGTCAGGAGAGTGACCAACAAGTTGCCAAATTCAAGGCCTTTGAGATACAATTATCTCAAGAAAGCTATAGCCAAATCTTTAGTTCTTCTTCTATATCAAGATCACACGAAAATGTGAAGTAA 2832 0.3782 MEFGISISKLLYLFLFGCFALKAFTNCGSDAQLILEDEVKVLKTISSKIENLNWDVTQHSCVDGSFKNETITADSFTRNVICDCKFSNGKVCHVTKIIATGLNLSGLLPSEFGFLTYLQELDLSHNYLNGSIPRSFGRLPLVTLRLTANAISGSIPDAFGEITSLENLELKDNLLEGTLPSSLGKLMQLRKLDLSGNNFLGTIPESFGNLKKLESIYLDGTNISGKLSNFIGNWTQLQEMSLEGTSMEGPIPTIISHLTNLSELRISDLHGPAIMRFPNLENLTSLRRLVLRNCSIHDSIPNYIGKMENLYRVDLSFNKLTGIIPNNISNLTALYYMILTENSLTGKFPDWILQQQYNYGSFDLSYNNFSETSATNCQYENLNLVSSLSSSANTLCTCLKRGLPCGRKPKYHSLFINCGGPEIKYEGNKYEGDINSQDTSFFCPGDDKWAYSSTAGITTYYNHIAKNRFSLNITGPDFYQTARISPLSLKYHGLCMINGNYNVKLYFAEIMYSHDQNFNNLGRRIFDVSIQGRKYLHDFNIIREAGGVGKGIVKDFNVDVNDNTLEIHLYWARKGTSSIPNDNNSVYGPLISAISVTPKLLDLKTGYFSLKQIKDATNNFALENKIGEGGFGPVHKGILSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEENQLLLIYEYMENNSLARALFGGQGQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYIAPEYAMRGHLTEKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSLQEVTRMLELALLCTNPSPTLRPSMSSVVDMLEGKLPIQTLATKRQESDQQVAKFKAFEIQLSQESYSQIFSSSSISRSHENVK 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00044 943 Gene3D Phosphorylase Kinase; domain 1 597 695 - -
Pral4311g00044 943 FunFam Putative LRR receptor-like serine/threonine-protein kinase 696 903 - -
Pral4311g00044 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Pral4311g00044 943 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Pral4311g00044 943 Gene3D Ribonuclease Inhibitor 34 273 IPR032675 -
Pral4311g00044 943 Gene3D - 412 596 - -
Pral4311g00044 943 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515
Pral4311g00044 943 Pfam Leucine Rich Repeat 309 331 IPR001611 GO:0005515
Pral4311g00044 943 Gene3D Ribonuclease Inhibitor 274 401 IPR032675 -
Pral4311g00044 943 Pfam Protein tyrosine and serine/threonine kinase 622 890 IPR001245 GO:0004672|GO:0006468
Pral4311g00044 943 Gene3D Transferase(Phosphotransferase) domain 1 696 919 - -
Pral4311g00044 943 ProSiteProfiles Protein kinase domain profile. 620 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00044 943 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 83 274 - -
Pral4311g00044 943 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 599 - -
Pral4311g00044 943 SUPERFAMILY Protein kinase-like (PK-like) 604 892 IPR011009 -
Pral4311g00044 943 CDD STKc_IRAK 626 893 - -
Pral4311g00044 943 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 592 695 - -
Pral4311g00044 943 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 372 - -
Pral4311g00044 943 SMART serkin_6 620 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00044 943 Pfam Malectin domain 414 594 IPR021720 -
Pral4311g00044 943 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 928 - -
Pral4311g00044 943 SUPERFAMILY L domain-like 52 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00044 Pral-Chr4311 665927 676508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00044 1 941 Receptor kinase-like Gene Family AT1G53440 53.892 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00044 PK_Tyr_Ser-Thr 3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00044 - - gmx:121173337 1154.81