Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00041 ATGGAGTTTGGGATCTCAATCTCTAAACTTTTATATCTTTTCTTATTTGGATGTTTCGCTTTGAAAGCTTTCACAAACTGTGGATCCGATGCTCAACTCATACTAGAAGATGAAGTGAAAGTTCTAAAAACAATATCATCGAAGATAGAGAACTTGAATTGGGATGTGACCCAACATTCTTGTGTCGATGGAAGCTTCAAAAATGAGACCATTACAGCGGATAGCTTCACAAGGAATGTAATATGCGATTGCAAATTCTCAAATGGAAAAGTTTGTCATGTTACAAAGATCATTGCCACGGGTCTCAACTTATCGGGACTTTTACCAAGTGAATTTGGATTCCTTACCTATCTGCAAGAACTACGCCTTACGGCTAACGCAATCAGTGGCTCAATTCCAGACGCTTTTGGTGAAATTACATCTTTAGAGAATTTAGAGTTGAAAGATAATCTATTAGAAGGGACTCTTCCTTCTAGCCTCGGAAAATTGATGCAGCTACGCAAGTTGGATCTTTCTGGAAATAACTTCTTAGGGACAATACCCGAAAGTTTTGGTAATCTGAAAAAACTAGAATCTATTTATTTAGATGGGACCAATATATCAGGAAAATTATCCAATTTTATTGGGAATTGGACCCAACTCCAAGAAATGTCCCTGGAGGGAACGTCCATGGAAGGCCCCATTCCTACAATCATATCTCACTTAACAAATTTGTCTGAACTGAGAATATCTGATTTGCATGGACCAGCGATAATGAGATTTCCTAATCTGGAGAATTTGACATCCTTGCGGCGCCTGGTGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTATATAGAGTAGATTTGAGCTTCAACAAGTTGACCGGTATAATCCCAAACAATATAAGTAACTTGACTGCCCTATATTACATGATTCTAACTGAAAATTCCCTGACCGGAAAATTTCCTGATTGGATATTGCAACAGCAATACAATTATGGTTCTTTTGATTTATCTTACAACAATTTTTCGGAGACCTCTGCGACTAATTGTCAGTACGAAAACTTAAACTTGGTTTCGAGTCTATCATCTTCAGCAAACACATTATGCACTTGCTTGAAAAGGGGGCTTCCTTGTGGAAGAAAACCAAAGTATCATTCATTGTTCATAAACTGTGGTGGACCAGAAATTAAATATGAGGGGAATAAATATGAAGGCGATATCAATTCTCAGGATACCTCATTCTTTTGCCCCGGTGATGATAAATGGGCTTATAGCAGCACAGCAGGAATAACAACATACTATAATCACATAGCAAAAAATAGATTTTCCCTCAACATTACTGGTCCTGACTTTTACCAAACAGCTCGCATTTCCCCTCTGTCTCTCAAGTACCATGGCCTCTGTATGATTAATGGAAATTACAATGTCAAGCTATATTTTGCTGAGATTATGTATTCTCATGACCAAAATTTCAATAACCTTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGGAAATATTTGCATGATTTCAACATTATCAGGGAAGCTGGTGGCGTTGGTAAGGGCATTGTCAAGGACTTTAATGTTGATGTTAATGATAACACCTTGGAGATTCATTTGTATTGGGCTCGAAAAGGAACTAGTTCTATTCCTAATGATAATAACAGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATTTCAATATTCCTTGGATTTCTGGGGGAGGCATTGCTGGAATTGTGGTTGGATCGTATGTGTTCCTCATCATACTAATAATAATATTCATCCTCCGACGAATGGGCTTACTAGGTGACAGACGTTCAAAAGACAAACAACTTTTAGATTTAAAAACAGGTTATTTCTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGCCCTAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGCACAAGGGTATACTATCAAATGGAGTTGTCATAGCTGTGAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAACTTTATGGATGTTGCGTTGAAGAAAACCAATTGCTGCTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGAGCTCTTTTTGGTGGTCAAGGACAAAAGATACATTTGGACTGGCCTACAAGAATGAAGATATGCGTAGGAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGCTGAAAATTGTGCACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATTGGTTATATAGCTCCTGAATATGCAATGCGAGGACACTTAACTGAGAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGCAACACAAGTTACAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGCTAGTGGATCCAAGCCTTGGTTCAAGCTACTCCTTACAGGAAGTCACGAGAATGCTGGAGCTGGCACTCCTATGTACTAACCCATCTCCAACTCTAAGGCCATCCATGTCCTCTGTTGTTGACATGCTTGAAGGAAAGTTGCCAATCCAAACCCTAGCAACCAAACGTCAGGAGAGTGACCAACAAGTTGCCAAATTCAAGGCCTTTGAGATACAATTATCTCAAGAAAGCTATAGCCAAATCTTTAGTTCTTCTTCTATATCAAGATCACACGAAAATGTGAAGTAA 2901 0.3795 MEFGISISKLLYLFLFGCFALKAFTNCGSDAQLILEDEVKVLKTISSKIENLNWDVTQHSCVDGSFKNETITADSFTRNVICDCKFSNGKVCHVTKIIATGLNLSGLLPSEFGFLTYLQELRLTANAISGSIPDAFGEITSLENLELKDNLLEGTLPSSLGKLMQLRKLDLSGNNFLGTIPESFGNLKKLESIYLDGTNISGKLSNFIGNWTQLQEMSLEGTSMEGPIPTIISHLTNLSELRISDLHGPAIMRFPNLENLTSLRRLVLRNCSIHDSIPNYIGKMENLYRVDLSFNKLTGIIPNNISNLTALYYMILTENSLTGKFPDWILQQQYNYGSFDLSYNNFSETSATNCQYENLNLVSSLSSSANTLCTCLKRGLPCGRKPKYHSLFINCGGPEIKYEGNKYEGDINSQDTSFFCPGDDKWAYSSTAGITTYYNHIAKNRFSLNITGPDFYQTARISPLSLKYHGLCMINGNYNVKLYFAEIMYSHDQNFNNLGRRIFDVSIQGRKYLHDFNIIREAGGVGKGIVKDFNVDVNDNTLEIHLYWARKGTSSIPNDNNSVYGPLISAISVTPNFNIPWISGGGIAGIVVGSYVFLIILIIIFILRRMGLLGDRRSKDKQLLDLKTGYFSLKQIKDATNNFALENKIGEGGFGPVHKGILSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEENQLLLIYEYMENNSLARALFGGQGQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYIAPEYAMRGHLTEKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSLQEVTRMLELALLCTNPSPTLRPSMSSVVDMLEGKLPIQTLATKRQESDQQVAKFKAFEIQLSQESYSQIFSSSSISRSHENVK 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00041 966 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 951 - -
Pral4311g00041 966 Gene3D Ribonuclease Inhibitor 251 377 IPR032675 -
Pral4311g00041 966 Gene3D Ribonuclease Inhibitor 40 161 IPR032675 -
Pral4311g00041 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
Pral4311g00041 966 SUPERFAMILY Protein kinase-like (PK-like) 627 915 IPR011009 -
Pral4311g00041 966 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 614 718 - -
Pral4311g00041 966 FunFam Leucine-rich repeat receptor protein kinase EMS1 108 207 - -
Pral4311g00041 966 Gene3D Phosphorylase Kinase; domain 1 612 718 - -
Pral4311g00041 966 SMART serkin_6 643 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00041 966 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 388 576 - -
Pral4311g00041 966 Pfam Malectin domain 391 571 IPR021720 -
Pral4311g00041 966 Gene3D Ribonuclease Inhibitor 162 250 IPR032675 -
Pral4311g00041 966 CDD STKc_IRAK 649 916 - -
Pral4311g00041 966 Gene3D Transferase(Phosphotransferase) domain 1 719 942 - -
Pral4311g00041 966 SUPERFAMILY L domain-like 87 351 - -
Pral4311g00041 966 Pfam Protein tyrosine and serine/threonine kinase 645 913 IPR001245 GO:0004672|GO:0006468
Pral4311g00041 966 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Pral4311g00041 966 FunFam Putative LRR receptor-like serine/threonine-protein kinase 719 926 - -
Pral4311g00041 966 Pfam Leucine Rich Repeat 286 308 IPR001611 GO:0005515
Pral4311g00041 966 Gene3D - 389 576 - -
Pral4311g00041 966 ProSiteProfiles Protein kinase domain profile. 643 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00041 966 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 255 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00041 Pral-Chr4311 665927 676508 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00041 1 964 Receptor kinase-like Gene Family AT1G53440 54.536 0.0 1028
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00041 PK_Tyr_Ser-Thr 3.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00041 - - gmx:121173337 1154.81