Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00035 ATGGAGTTTGGGATCTCAATCTCTAAACTTTTATATCTTTTCTTATTTGGATGCTTCGGTTTGGAAGCTTTCACAAACTATGGATCCACTGCTCAACTCATACCAGAAGATGAAGTGAAAGTTCTAAAAACAATATCATCGAAGATAGAGAACTTGAAATGGAATGCGACCCCCCGTTCCTGTGTCGATGAAGGATTCAAAAATGAGGCCTTTAATACAGCAAATAGCGTGACGAATGTAACATGCAATTGCAGTTTCTCATTTGGCAAAGTTTGTCATGTTACAAATATCATTGCCACGGGTCTCAATTTATCGGGACTTTTACCAAGTGAATTTGGATTCCTTACTTATCTGCAAGAACTTGATTTGTCTCACAATTATCTAAATGGATCAATCCCAAGGAGCTTTGCTAGACTCCCTCTTGTTACATTACGTCTTACGGCTAACGCAATCAGTGGTTCAATTCCAAACGCTTTTGGTGAAATTACAACTTTAGAGGTTTTAGATTTGGAAGATAACCTGTTGGAAGGAACTCTTCCTTCTAGTCTCGGAAAATTGACGCAGCTACGCATGTTGGATCTTTCTGGAAATAACTTCTTAGGGGCAATACCTGAAAGTTTTGGTAATATGAAAAAACTAGAATATATCTCTTTAGATGGCACCAACATATCAGGAAAATTACCCAATTTTATTGGGAACTGGACCCAACTCCAAACAATGCATTTGCAGGGAACGTCCATGGAAGGCCCCATTCCTACAACCATATCTCACTTAACAAATTTGTCTTCTTTCATGATATCTGATTTGCATGGACCAGCGATAATGAGATTTCCTAATTTGACAAATTTGAAGTCATTGGAATACCTGGTGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAAATTATATAAAGTAGATTTGAGCTTCAACAAGTTGACCGGTAAAATCCCAAATAGTATAAGTAGCTTGAGCTACCTAAATTACATGTTTCTAAACGAGAATTCTCTGACTGGAAATATTCCTGATTGGATATTGCGACGGCAAAATTATAATTATGATTTCTCTTACAACAATTTTTTAGAGACTTCTGCGACTACTTGTCAGTATGGAGATATAAACCTAGTTTCTAGTCTATCATCTACAGCAAACACCTCGCATACTTGCCTAAAAAGGGGCCTTCCTTGTAAAGGAAAACCCAAATATCATTCATTGTTCATAAACTGTGGAGGAAAAGATATTGAATATAAGGGGAATAAATATGAAGGAGACAACAATCCTGGCGATGACTCATTCTTTCCTAATGAAGATAAATGGGCTTATAGCAACACAGCAGGAGTATATTACTATGATAGTTACATAGTAACAAACATATATTCCCTCAACACTAGTTCTGACCTCTACCAAACAGCTCGCGTTTCTCCTCTGTCTCTCAAGTACCATGGCCTCTGTATGATTAATGGACATTATAAAGTCAAGCTATATTTTGCTGAGATTATGTATTCTTCTGACCAAAATTTCTATCACACTGGAAGGCGCGTATTTGATGTTTCAATCCAAGGTAAGAACTATTTGCATGATTTCAACATTATGAGGGAAGCTGGCGGCGTTGGTAAGGGCATTGTCAAGGACTTTAATGTTCATGTTAAAGATAACACCTTGGAGATTCATCTGTACTGGGCTGGAAAGGGAACTACCTCTATTCCTTATGATAATGGTGTGTATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATTTCAAAATTTCTTGGATTTCTGGTGGAGTCATTGCTGGAATTGTGGTTGGGTCATGTGTGTTCCTCATCATACTAATAGTAATAATATTCGTCCTCCGAAAAATGGGCTTACTAGGTGGCAGCAATTCAAAAGACAAACAACTTTTGGATCTAAAGACGGGTTATTTCTCTTTGAAACAAATCAAAGATGCCACTAATAACTTCGCCCTAGAAAATAAGATCGGTGAAGGAGGTTTTGGACCGGTGTACAAGGGTATACTTTCAAATGGTGTTGTCATAGCTGTGAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGCAACATCCAAATCTTGTAAAGCTTTATGGATGTTGCGTTGAAGGAAACCAATTGTTGCTGATATATGAGTATATGGAGAACAATTGTCTTGCTAGTGCTCTTTTTGGTGGCCAAGGAAAAAAGATGCACTTAGACTGGCCTACAAGAATGAAGATATGCGTAGAAATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGCTGAAAATTGTGCATAGAGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCGGATTTTGGATTAGCCAAACTTAATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTAGAAGTTGCCAGTGGAAAAGCAACACAAGTTTACAGGCCAAAAGAGGAGTTTGTTTACCTTCTTGACTGGGCCTATGTTCTTCAAGAGCAAGGAAACCTGCTTGAGCTAGTGGATCCATGTCTTGGTTCAAGCTACTCCTCACAAGAAGTCATGAGAATGCTGGAGCTGGCACTCCTATGTACTAACCCATCTCCAACTCTGAGGCCATCCATGGCCTCTGTCGTTTGCATGCTTGAAGGAAAGTTGCCAATCCAAGCCCTACGTCGAGAGAGTGATCAACAGGTTTCCAGATTCAAGGCCTTGGAGATACAATCATCTCAAGAAAGCCATACCCAAACCTTTAGTTCTTCTTCTATATCAAAATCACATGAAAATGTGAAGCAAATGATTGAAGCAACGGATTGTGCATCATCACAATACAATTGTAGTAGTTAA 3000 0.3813 MEFGISISKLLYLFLFGCFGLEAFTNYGSTAQLIPEDEVKVLKTISSKIENLKWNATPRSCVDEGFKNEAFNTANSVTNVTCNCSFSFGKVCHVTNIIATGLNLSGLLPSEFGFLTYLQELDLSHNYLNGSIPRSFARLPLVTLRLTANAISGSIPNAFGEITTLEVLDLEDNLLEGTLPSSLGKLTQLRMLDLSGNNFLGAIPESFGNMKKLEYISLDGTNISGKLPNFIGNWTQLQTMHLQGTSMEGPIPTTISHLTNLSSFMISDLHGPAIMRFPNLTNLKSLEYLVLRNCSIHDSIPNYIGKMEKLYKVDLSFNKLTGKIPNSISSLSYLNYMFLNENSLTGNIPDWILRRQNYNYDFSYNNFLETSATTCQYGDINLVSSLSSTANTSHTCLKRGLPCKGKPKYHSLFINCGGKDIEYKGNKYEGDNNPGDDSFFPNEDKWAYSNTAGVYYYDSYIVTNIYSLNTSSDLYQTARVSPLSLKYHGLCMINGHYKVKLYFAEIMYSSDQNFYHTGRRVFDVSIQGKNYLHDFNIMREAGGVGKGIVKDFNVHVKDNTLEIHLYWAGKGTTSIPYDNGVYGPLISAISVTPNFKISWISGGVIAGIVVGSCVFLIILIVIIFVLRKMGLLGGSNSKDKQLLDLKTGYFSLKQIKDATNNFALENKIGEGGFGPVYKGILSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLLLIYEYMENNCLASALFGGQGKKMHLDWPTRMKICVEIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLNEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEVASGKATQVYRPKEEFVYLLDWAYVLQEQGNLLELVDPCLGSSYSSQEVMRMLELALLCTNPSPTLRPSMASVVCMLEGKLPIQALRRESDQQVSRFKALEIQSSQESHTQTFSSSSISKSHENVKQMIEATDCASSQYNCSS 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00035 999 Pfam Protein tyrosine and serine/threonine kinase 664 929 IPR001245 GO:0004672|GO:0006468
Pral4311g00035 999 Coils Coil 939 959 - -
Pral4311g00035 999 SUPERFAMILY Protein kinase-like (PK-like) 646 934 IPR011009 -
Pral4311g00035 999 Gene3D Phosphorylase Kinase; domain 1 632 737 - -
Pral4311g00035 999 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Pral4311g00035 999 Gene3D - 410 594 - -
Pral4311g00035 999 Pfam Leucine Rich Repeat 118 138 IPR001611 GO:0005515
Pral4311g00035 999 Pfam Leucine Rich Repeat 309 331 IPR001611 GO:0005515
Pral4311g00035 999 Gene3D Ribonuclease Inhibitor 38 195 IPR032675 -
Pral4311g00035 999 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 633 737 - -
Pral4311g00035 999 FunFam Inactive leucine-rich repeat receptor-like protein kinase 108 205 - -
Pral4311g00035 999 SUPERFAMILY L domain-like 83 367 - -
Pral4311g00035 999 ProSiteProfiles Protein kinase domain profile. 662 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00035 999 Gene3D Transferase(Phosphotransferase) domain 1 738 959 - -
Pral4311g00035 999 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Pral4311g00035 999 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 409 594 - -
Pral4311g00035 999 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 371 - -
Pral4311g00035 999 CDD STKc_IRAK 668 935 - -
Pral4311g00035 999 Pfam Malectin domain 412 589 IPR021720 -
Pral4311g00035 999 Gene3D Ribonuclease Inhibitor 196 395 IPR032675 -
Pral4311g00035 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Pral4311g00035 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 968 - -
Pral4311g00035 999 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00035 Pral-Chr4311 556509 565598 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00035 1 984 Receptor kinase-like Gene Family AT1G53440 55.677 0.0 1075
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00035 PK_Tyr_Ser-Thr 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00035 - - qsa:O6P43_001071 1176.77