Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00030 ATGGTTCCATTCCAAATTATATTGGTAAAATGGAAAAACTTATCTAGGCTAGATTTGAGCTTCAACAGGTTGACTGGTAAAATCCCAAATAGTATAAGTAACCCGACCTCCCTTCAATACATGATTCTAACTGAAAATTCTCTGACCGGAAAAATTCCTGATTGGATATTGCAACAACAAAACAATTATGGTTCTTTTGATTTATCTTACAACAATTTTTCGGAGACTTCTGCGACTACTTGTCAGTATGAAAATTTAAACTTGGCTTTGAGTGTATCATCTTCAGCAAACACCTCATGTACTTGCCTGAAAAGGAGCCTTCCTTGTGGAGGAAAACCCAAGTATCATTCATTGTTCATAAACTGTGGAGGATCAGAAACTAAATATGAGGGGAATAAATATGAAGGCGACGTCAATTCTGAGAGTGTCTCATTCTCTTGCCCTAGTGATGATAAATGGGCTTATAGCACCACAGAAGGAGAAAGATCCTATAATCACATAGCAACAAACAGTTTTTCCCTCAACATTACTGGTCCTGACTTCTACCAAACAGCTCGCCTTTCCCCTTTGTCTCTCAAGTACCATGGCCTCTGCATGATTAATGGAAATTACAACGTCAAGCTATATTTTGCTGAGATTATGTTTTCTTATGACCAAAATTTCCATCACGTTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGAAAATATTTGCATGATTTCAACATTATGAGGGAAGCTGGGGGCGTTGGTAAGGGCATTGTCAAGAACTTTAATGTTGATGTTAATGATAACACCTTGGAGATTCATTTGTACTGGGCTGGAAAAGGAACTACCACTATTCCAAATTATGCTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATTTCAAAATCCCTTGGAGTTCTGGTGGAGCTATTGCTGGAATTGTGGTTGGATCATTTGTGTTCCTCATCATACTAATAATAATATTCGTCCTCCGAAAAATGGGCTTACTAGGTGACAGAGATTCAAAAGCCAAACAATTTTTAGATCTAAAAACAGGTTATTTTTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGTCCCAGAAAATAAGATTGGTGAAGGAGGTTTCGGACCGGTGTACAAGGGTACACTATCAAATGGTGTTGTCATAGCTGTAAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATTTCTGCTTTGCAACACCCAAATCTCGTAAAGCTTTATGGATGTTGCGTTGAAGGAAATCAATTGTTGCTGATATATGAGTACATGGAGAATAATAGTCTTGCTAGTGCTCTTTTTGGTGGCCAAGGACAAAAGATACATTTGGACTGGCCTACACGAATGAAGATATGCATAGGAATAGCAAGAGGATTGGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGGGATATTAAGGCAACAAATGTCTTGCTTGATAAGGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATGCCTATGTTCTTCAAGAACAAGGAAACCTTCTTGAGCTGGTGGATACAAGTCTTGGTTCAAGCTACTCCTCAAAGGAAGCCATGA 1683 0.3779 MVPFQIILVKWKNLSRLDLSFNRLTGKIPNSISNPTSLQYMILTENSLTGKIPDWILQQQNNYGSFDLSYNNFSETSATTCQYENLNLALSVSSSANTSCTCLKRSLPCGGKPKYHSLFINCGGSETKYEGNKYEGDVNSESVSFSCPSDDKWAYSTTEGERSYNHIATNSFSLNITGPDFYQTARLSPLSLKYHGLCMINGNYNVKLYFAEIMFSYDQNFHHVGRRIFDVSIQGRKYLHDFNIMREAGGVGKGIVKNFNVDVNDNTLEIHLYWAGKGTTTIPNYAVYGPLISAISVTPNFKIPWSSGGAIAGIVVGSFVFLIILIIIFVLRKMGLLGDRDSKAKQFLDLKTGYFSLKQIKDATNNFVPENKIGEGGFGPVYKGTLSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLLLIYEYMENNSLASALFGGQGQKIHLDWPTRMKICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTMPMFFKNKETFLSWWIQVLVQATPQRKP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00030 560 ProSiteProfiles Leucine-rich repeat profile. 13 35 IPR001611 GO:0005515
Pral4311g00030 560 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 338 442 - -
Pral4311g00030 560 Pfam Protein tyrosine and serine/threonine kinase 370 538 IPR001245 GO:0004672|GO:0006468
Pral4311g00030 560 Gene3D Phosphorylase Kinase; domain 1 336 442 - -
Pral4311g00030 560 SMART serkin_6 367 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00030 560 Pfam Malectin domain 118 295 IPR021720 -
Pral4311g00030 560 Gene3D Transferase(Phosphotransferase) domain 1 443 537 - -
Pral4311g00030 560 Gene3D Ribonuclease Inhibitor 3 116 IPR032675 -
Pral4311g00030 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Pral4311g00030 560 SUPERFAMILY L domain-like 8 78 - -
Pral4311g00030 560 Gene3D - 117 300 - -
Pral4311g00030 560 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 534 - -
Pral4311g00030 560 SUPERFAMILY Protein kinase-like (PK-like) 351 533 IPR011009 -
Pral4311g00030 560 FunFam Os07g0541700 protein 443 532 - -
Pral4311g00030 560 ProSiteProfiles Protein kinase domain profile. 367 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00030 560 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 115 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00030 Pral-Chr4311 368317 442243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00030 14 533 Receptor kinase-like Gene Family AT1G53440 57.895 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00030 PK_Tyr_Ser-Thr 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00030 - - adu:107459475 700.279