Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00029 ATGGTTCCATTCCAAATTATATTGGTAAAATGGAAAAACTTATCTAGGCTAGATTTGAGCTTCAACAGGTTGACTGGTAAAATCCCAAATAGTATAAGTAACCCGACCTCCCTTCAATACATGATTCTAACTGAAAATTCTCTGACCGGAAAAATTCCTGATTGGATATTGCAACAACAAAACAATTATGGTTCTTTTGATTTATCTTACAACAATTTTTCGGAGACTTCTGCGACTACTTGTCAGTATGAAAATTTAAACTTGGCTTTGAGTGTATCATCTTCAGCAAACACCTCATGTACTTGCCTGAAAAGGAGCCTTCCTTGTGGAGGAAAACCCAAGTATCATTCATTGTTCATAAACTGTGGAGGATCAGAAACTAAATATGAGGGGAATAAATATGAAGGCGACGTCAATTCTGAGAGTGTCTCATTCTCTTGCCCTAGTGATGATAAATGGGCTTATAGCACCACAGAAGGAGAAAGATCCTATAATCACATAGCAACAAACAGTTTTTCCCTCAACATTACTGGTCCTGACTTCTACCAAACAGCTCGCCTTTCCCCTTTGTCTCTCAAGTACCATGGCCTCTGCATGATTAATGGAAATTACAACGTCAAGCTATATTTTGCTGAGATTATGTTTTCTTATGACCAAAATTTCCATCACGTTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGAAAATATTTGCATGATTTCAACATTATGAGGGAAGCTGGGGGCGTTGGTAAGGGCATTGTCAAGAACTTTAATGTTGATGTTAATGATAACACCTTGGAGATTCATTTGTACTGGGCTGGAAAAGGAACTACCACTATTCCAAATTATGCTGTATATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAATTTCAAAATCCCTTGGAGTTCTGGTGGAGCTATTGCTGGAATTGTGGTTGGATCATTTGTGTTCCTCATCATACTAATAATAATATTCGTCCTCCGAAAAATGGGCTTACTAGGTGACAGAGATTCAAAAGCCAAACAATTTTTAGATCTAAAAACAGGTTATTTTTCTTTAAAACAAATCAAAGATGCCACTAATAACTTTGTCCCAGAAAATAAGATTGGTGAAGGAGGTTTCGGACCGGTGTACAAGGGTACACTATCAAATGGTGTTGTCATAGCTGTAAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATTTCTGCTTTGCAACACCCAAATCTCGTAAAGCTTTATGGATGTTGCGTTGAAGGAAATCAATTGTTGCTGATATATGAGTACATGGAGAATAATAGTCTTGCTAGTGCTCTTTTTGGTGGCCAAGGACAAAAGATACATTTGGACTGGCCTACACGAATGAAGATATGCATAGGAATAGCAAGAGGATTGGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGGGATATTAAGGCAACAAATGTCTTGCTTGATAAGGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTGATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATACTTAACTGAGAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGCAACACAAGTTACAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTTCTTCAAGAACAAGGAAACCTTCTTGAGCTGGTGGATACAAGTCTTGGTTCAAGCTACTCCTCAAAGGAAGCCATGAGAATGCTGGAGCTGGCACTCCTATGTACAAACCCATCTCCAACTTTGAGGCCATCCATGTCCTCTGTTGTTTGCATGCTTGAAGGAAAGTTGCCAATCCAAGCACTAACAATCAAACGTCAGGAGAGTGACCAACAGGTTGCGAGATTCAAGGCCTTTGAGATACTATCATCTCAAGAAAGCCATAGCCAAACCCTTAGTTTTTCTTCCACATCGAAGTCACATGAAAATGTGAAGCAAAAGGTTGAAGCAATGGATAGTGCATCATCACAATACAATCGTAGCAGTTAA 2124 0.3847 MVPFQIILVKWKNLSRLDLSFNRLTGKIPNSISNPTSLQYMILTENSLTGKIPDWILQQQNNYGSFDLSYNNFSETSATTCQYENLNLALSVSSSANTSCTCLKRSLPCGGKPKYHSLFINCGGSETKYEGNKYEGDVNSESVSFSCPSDDKWAYSTTEGERSYNHIATNSFSLNITGPDFYQTARLSPLSLKYHGLCMINGNYNVKLYFAEIMFSYDQNFHHVGRRIFDVSIQGRKYLHDFNIMREAGGVGKGIVKNFNVDVNDNTLEIHLYWAGKGTTTIPNYAVYGPLISAISVTPNFKIPWSSGGAIAGIVVGSFVFLIILIIIFVLRKMGLLGDRDSKAKQFLDLKTGYFSLKQIKDATNNFVPENKIGEGGFGPVYKGTLSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLLLIYEYMENNSLASALFGGQGQKIHLDWPTRMKICIGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLLELVDTSLGSSYSSKEAMRMLELALLCTNPSPTLRPSMSSVVCMLEGKLPIQALTIKRQESDQQVARFKAFEILSSQESHSQTLSFSSTSKSHENVKQKVEAMDSASSQYNRSS 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00029 707 ProSiteProfiles Leucine-rich repeat profile. 13 35 IPR001611 GO:0005515
Pral4311g00029 707 Gene3D - 116 300 - -
Pral4311g00029 707 MobiDBLite consensus disorder prediction 669 707 - -
Pral4311g00029 707 PIRSF SRK 292 695 IPR024171 GO:0004674
Pral4311g00029 707 PIRSF SRK 19 159 IPR024171 GO:0004674
Pral4311g00029 707 SUPERFAMILY L domain-like 8 77 - -
Pral4311g00029 707 Gene3D Phosphorylase Kinase; domain 1 336 442 - -
Pral4311g00029 707 Gene3D Transferase(Phosphotransferase) domain 1 443 666 - -
Pral4311g00029 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Pral4311g00029 707 Pfam Malectin domain 118 295 IPR021720 -
Pral4311g00029 707 Pfam Protein tyrosine and serine/threonine kinase 370 636 IPR001245 GO:0004672|GO:0006468
Pral4311g00029 707 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 673 - -
Pral4311g00029 707 Gene3D Ribonuclease Inhibitor 3 115 IPR032675 -
Pral4311g00029 707 ProSiteProfiles Protein kinase domain profile. 367 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00029 707 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 115 300 - -
Pral4311g00029 707 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 338 442 - -
Pral4311g00029 707 MobiDBLite consensus disorder prediction 669 686 - -
Pral4311g00029 707 SUPERFAMILY Protein kinase-like (PK-like) 351 639 IPR011009 -
Pral4311g00029 707 FunFam Putative LRR receptor-like serine/threonine-protein kinase 443 650 - -
Pral4311g00029 707 SMART serkin_6 367 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00029 707 CDD STKc_IRAK 373 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00029 Pral-Chr4311 368095 442243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00029 14 680 Receptor kinase-like Gene Family AT1G53430 61.674 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00029 PK_Tyr_Ser-Thr 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00029 - - gmx:100815226 927.546