Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00028 ATGGCTTTAATAGACGAAGACAACAATGACAACGTAGAACGACAGAATAAGGAAATCGATGTGGACTCTAACCATTATCCTACCCCCATGCATAGCGATGATATTGAAGATAGGGGACCCAATTGTAGTCTAAGAAAGGGAGACCTCCAACCGGAACTTTCTGAGGTGCAACACAACAGGTCACCGATAGAGGGTATAGACCACCAAATGAATAATGATGGGGTTGCAGGAAGAGATGTGACAACACTAGGCTCTAAAACTATTCTTAAGACAAGAACTGGTGGGCCAAAAGCTCATAAGATTGCTACCTCATTGGGTTTCGAGAATGTTGAAGTGGTGGATGCTCTAGGATATAGTGGCGGAATATGGGTGTTATGGAACAATGGGGCTTGGAAGTTCCATGTCCTTGGCATTCAAACCAGAGATAGAAACACAAAATACTTCCATGCTAGAGTTAACACTAGGAAGAAGAGGAATAAGATCACAGCTTTAAAGAATGAAGATGGCGTATGGAGCTTCACACAAGAAGAACTTAAAGAGATTGCTCTCTCCTTCTATAAGGATCTTTTTTATGCAGACGGCCCTTTTGACGCACCTTTGCAGTGCTCACTCTCCTATCCTAGTGTTGATAATGCAAGTAAACAAGAATTAGAGGGGATTGTTTTTGAAGAAGAAATAAAGCAAGCTATTTTTAGCATGGGGGCCCTTAAATCTCCTGGCCCTGACGGTTTGAATGCTTTGTTCTACCAAAGTCAATGGAAACATGTGAATGTCTCTGTCATCCAATTTGTGAAGCATGTGTTTGAAAATCCCGCCACCGTCAAAAAAGTGAATGGCACCCTACTTGTCTTAATCCCAAAGATGGATCACCCTGAAACAATTCGTGACTTCCGTCCCGAAGCAACACAGCAGAAAAGATGGCGACCGATTCGACTCCATAAAGACGATCCTCCAATATCACATCTATTTTTTGCTGATGACCTCATTTTATTTGCCAAAGCTTCAATTGAACAAGTAGCTGTGATTAAGCCTTGTCTCGATCGCTTTTGTTTAGCATCTGGACAGAAAGTGAGTCAGAGCAAGACTGAGGTCATGATGAATCTAAGAACAGGAGTAGGTAATGATGAAGACCATTGGAAGGAGAGATTTGGAGTATATTGTTGGCATATCTGGTATCGTAGAAACTCTCGCATCTTTGAGAACACTACCTCCTCTGCTCAAGCAACTTTAGATAGAGCTCTAGCTATCTTACACTCTTTTATGGCAACTAAAGCTCAGTTGCAAAATGTGAATATCAATGGAGTGGTGAGAAGGAATACTGAAGTAGATAGCTGCAAAGAGAGTCGAGGATGGGTTAGTGTGCAAGTAGATGGTGCAGCTGCGATGGATGCATCCAAGGCAAGTTATGGAGGGGTGATTCGCGACGAAGAAGGGATAATGATGGAGGCTTGCATGTTCCATATTGGACATGGAGACGCCTTGCATGCAGAACTCTGGGCCATTTTACTGGGTTTGAGACGAGTTTGGGATTGGGGTTACAAACAGGTGAAGCTTTGGAGTGACTGTACAGAGGCCATCGAGTTGGTTAGAAGGGGGAGGACGCCTTACACAAAGACTGGACTCTCATCACTTAGCAAAACGCGGCCTCTCGAGCCCCCAAGATCTGCAGGTCCTTCCACTGGATGCGCTTTCATGAACTATGGATCCAATGCTCAACTCATACCAGGAGATGAAGTGAAAGCTCTAAAAACAATATCATCAAAGATAGAAAACTTGAATTGGGATGTGAGCCCACGTTCTTGTGTCGATGATGGCTTCAAAAATGAGATCATTAGTGGAATGAATAGCATCGTAAGGAATGTAACATGCGATTGCAGCTTCTCAAATGGAAAAGTTTGTCATGTTACAAATATCGATATGACGGGATTTAATCTATCTGGAGTTTTACCAAGTGAATTTGGATTCCTTAGCCATTTGCAAGTATTTGATTTGTCTCACAACTATCTAAACGGATCAATCCCAAGGAGCTTTGCTAGACCCCCTCTTGTTGCATTAAAAGTGATCATAACGCTACACCTTCCGGATAACGCAATCAGTGGTCCGATTCCAGATGAAATTGGTGAAATTACAACTTTAGAAGATTTAAGCTTGAATGATAATCTAATGGAAGGGACTCTTCCTTCTAGTCTCGGAAAATTGACCCAATTACGCATGCTGGATCTTACTGGAAATAACTTCTTGGGGGCCATACCCGAAAGTTTTGGTAATCTGACAAAACTGGAATATATCTCTTTAGATGGCACCAACATATCAGGAAAATTACCCAATTTTATTGGGAACTGGACCCAACTCCAGGTAATGTATTTGGAGGGAACGTCTATGGAAGGCCCCATTCCTATAACCATATCTCACTTAACATATTTGTCTAGTATGATGATAACTGATTTGCATGGACCAATGATAATGGGATTTCCTAATTTGGAGAATTTGACGTCCTTGCGATACCTGGTGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGCAAAACTTAAATAAAGTAGATTTGAGCTTCAACAAGTTGACTGGTAAAATCCCAAACAGTATAAGTAGCTTGACCTACCTAGATCTCATGATTCTAACTGAAAATTCTCTGACCGGAAAAATTCCTGATTGGATATTTCAACAGCAAAACAATGGTGTTTCTTTTGATTTATCTTACAACAATTTTTCAGAGACTTCTGCGACTACTTGTCAGTATGGAAAAATAAACTTGGTTTCAAGTCTATCATCTTCAGCAAACGCCTCGCGTACTTGCCTAAAAAGGGGCCTTCCTTGTGGGGAAAAACCCAAGTATCATTCATTGTTCATAAACTGTGGAGGACCAGAGACTGAATATGAGGGGAATAAATATGAAGGAGACAACAATCCTAATGGTGCCTCATACTTTTTTGCTAGTGAAGATAAATGGGCTTATAGTAGCACAGGAGTAGAAACTTACGAATATTCTAATAGTAATTACATAATAACAAAAGTATCTTCCCTTGATATTGTTGGTCCTGACTTCTACCAAACAGCTCGCGTTTCCCCTGTGTCTCTCAAGTACTATGGCCTTTGTATGATTAATGGAAATTACAACGTCAAACTATATTTTGCTGAGATTATGTATTCTTATGACCAAAATTTCCATCACACTGGAAGGCGCATATTTGATGTTTCAATCCAAGGTAGGAACTATTTACATGATTTCAATATTATGAGGGAAGCTGGTGGCGTTGGTAAGGGCATTGTCAAGGACTTTAATGTTGATGTTAATAATAACACCTTGGAGATTCATTTGTACTGGGCTGGAAAAGGAACTACCACTATTCCTACTTATGGTGTATATGGACCTCTTATATCTGCTATTTCGATCACCCCAAATTTCAAAATTCCTCGAATTTCTGGTGGAACAATTGCCGGAATTGTGGTTGGATCATGCGTGTTCCTCATCATACTAATAATAATATTCGTCCTTCAAAAAATGGGCTTACTAGCTGACAGAGATTCAAAAGACAAACAACTTTTAGATCTAAAAACAGGTTATTTCTCTTTGAAACAAATCAAAGGTGCCACTAATAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGTACAAGGGTACATTATCAAATGGCGTTGTCATAGCTGTGAAACAGCTTTCCTCTAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATGATTTCTGCTTTGCAACACCCAAACCTCGCAAAGCTTTATGGATGTTGTGTTGAAGGAAATCAATTGTTGCTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGTGCTCTTTTTGGTGGCCAGGGACAAAAGATACACTTGGACTGGCCTACAAGAATGAAGATATGTGTAGGAATAGCAAGAGGATTGGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGGGATATTAAGGCAACAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGATTTTGGATTAGCCAAGCTTAATGAAGATGAGAATACTCATATAAGCACAAGAATAGCAGGAACAATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGATAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTAGAAATAGTTAGTGGAAAAAGCAACACAAGTTATAGGCTAAGAGAGAACTTTGTTTACCTTCTTGACTGGGCTTATGTTCTTCAAGAGCAAGGAAACCTTCTTGAGCTAGTGGATGCAAGTCTTGGTTCAAGCTACTCCTCACAGGAAGTCATGAGAATGCTGGAGCTAGCACTCCTATGTACTAACCCATCTCCAACTCTGAGGCCATCCATGTCCTCTGTTGTTTTCATGCTTGAAGGAAAGTTGCCAATCCAAGCCCTAACAATCAAACATCGGGAGAGTGACCAACAGGTTGCAAGATTCAAGGCCTTTGAGATACAATCATCTCAAGAAAGCCATAGCCAAAACTTTAGTTCTTCTTCTACATCAAAATCACATGAAAATATGAAGCAAAGGGCTGAAGCAACGGATAGTGCAGCATCACAATGCGATCGTAGTAGTTAA 4665 0.4021 MALIDEDNNDNVERQNKEIDVDSNHYPTPMHSDDIEDRGPNCSLRKGDLQPELSEVQHNRSPIEGIDHQMNNDGVAGRDVTTLGSKTILKTRTGGPKAHKIATSLGFENVEVVDALGYSGGIWVLWNNGAWKFHVLGIQTRDRNTKYFHARVNTRKKRNKITALKNEDGVWSFTQEELKEIALSFYKDLFYADGPFDAPLQCSLSYPSVDNASKQELEGIVFEEEIKQAIFSMGALKSPGPDGLNALFYQSQWKHVNVSVIQFVKHVFENPATVKKVNGTLLVLIPKMDHPETIRDFRPEATQQKRWRPIRLHKDDPPISHLFFADDLILFAKASIEQVAVIKPCLDRFCLASGQKVSQSKTEVMMNLRTGVGNDEDHWKERFGVYCWHIWYRRNSRIFENTTSSAQATLDRALAILHSFMATKAQLQNVNINGVVRRNTEVDSCKESRGWVSVQVDGAAAMDASKASYGGVIRDEEGIMMEACMFHIGHGDALHAELWAILLGLRRVWDWGYKQVKLWSDCTEAIELVRRGRTPYTKTGLSSLSKTRPLEPPRSAGPSTGCAFMNYGSNAQLIPGDEVKALKTISSKIENLNWDVSPRSCVDDGFKNEIISGMNSIVRNVTCDCSFSNGKVCHVTNIDMTGFNLSGVLPSEFGFLSHLQVFDLSHNYLNGSIPRSFARPPLVALKVIITLHLPDNAISGPIPDEIGEITTLEDLSLNDNLMEGTLPSSLGKLTQLRMLDLTGNNFLGAIPESFGNLTKLEYISLDGTNISGKLPNFIGNWTQLQVMYLEGTSMEGPIPITISHLTYLSSMMITDLHGPMIMGFPNLENLTSLRYLVLRNCSIHDSIPNYIGKMQNLNKVDLSFNKLTGKIPNSISSLTYLDLMILTENSLTGKIPDWIFQQQNNGVSFDLSYNNFSETSATTCQYGKINLVSSLSSSANASRTCLKRGLPCGEKPKYHSLFINCGGPETEYEGNKYEGDNNPNGASYFFASEDKWAYSSTGVETYEYSNSNYIITKVSSLDIVGPDFYQTARVSPVSLKYYGLCMINGNYNVKLYFAEIMYSYDQNFHHTGRRIFDVSIQGRNYLHDFNIMREAGGVGKGIVKDFNVDVNNNTLEIHLYWAGKGTTTIPTYGVYGPLISAISITPNFKIPRISGGTIAGIVVGSCVFLIILIIIFVLQKMGLLADRDSKDKQLLDLKTGYFSLKQIKGATNNFAPENKIGEGGFGPVYKGTLSNGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLAKLYGCCVEGNQLLLIYEYMENNSLASALFGGQGQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLNEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTSYRLRENFVYLLDWAYVLQEQGNLLELVDASLGSSYSSQEVMRMLELALLCTNPSPTLRPSMSSVVFMLEGKLPIQALTIKHRESDQQVARFKAFEIQSSQESHSQNFSSSSTSKSHENMKQRAEATDSAASQCDRSS 1554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00028 1554 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 530 1525 - -
Pral4311g00028 1554 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 825 919 - -
Pral4311g00028 1554 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 958 1147 - -
Pral4311g00028 1554 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1184 1289 - -
Pral4311g00028 1554 SUPERFAMILY RNI-like 637 919 - -
Pral4311g00028 1554 FunFam Leucine-rich repeat receptor protein kinase EMS1 679 777 - -
Pral4311g00028 1554 Pfam Malectin domain 961 1142 IPR021720 -
Pral4311g00028 1554 MobiDBLite consensus disorder prediction 1513 1533 - -
Pral4311g00028 1554 Gene3D - 959 1147 - -
Pral4311g00028 1554 Pfam Reverse transcriptase-like 456 534 IPR002156 GO:0003676|GO:0004523
Pral4311g00028 1554 Gene3D - 450 598 IPR036397 GO:0003676
Pral4311g00028 1554 ProSiteProfiles Protein kinase domain profile. 1214 1489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00028 1554 Pfam Leucine Rich Repeat 856 878 IPR001611 GO:0005515
Pral4311g00028 1554 Pfam Protein tyrosine and serine/threonine kinase 1217 1482 IPR001245 GO:0004672|GO:0006468
Pral4311g00028 1554 SUPERFAMILY Ribonuclease H-like 450 531 IPR012337 -
Pral4311g00028 1554 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1290 1497 - -
Pral4311g00028 1554 Gene3D Phosphorylase Kinase; domain 1 1180 1289 - -
Pral4311g00028 1554 CDD STKc_IRAK 1220 1487 - -
Pral4311g00028 1554 MobiDBLite consensus disorder prediction 1513 1554 - -
Pral4311g00028 1554 SUPERFAMILY Protein kinase-like (PK-like) 1198 1486 IPR011009 -
Pral4311g00028 1554 SMART serkin_6 1214 1483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00028 1554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1336 1348 IPR008271 GO:0004672|GO:0006468
Pral4311g00028 1554 CDD RNase_H_like 456 532 IPR044730 -
Pral4311g00028 1554 Gene3D Transferase(Phosphotransferase) domain 1 1290 1512 - -
Pral4311g00028 1554 Gene3D Ribonuclease Inhibitor 824 944 IPR032675 -
Pral4311g00028 1554 Gene3D Ribonuclease Inhibitor 624 823 IPR032675 -
Pral4311g00028 1554 MobiDBLite consensus disorder prediction 7 21 - -
Pral4311g00028 1554 Pfam Leucine rich repeat 735 792 IPR001611 GO:0005515
Pral4311g00028 1554 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00028 Pral-Chr4311 213320 248783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00028 567 1535 Receptor kinase-like Gene Family AT1G53440 55.522 0.0 1060
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00028 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00028 - - gmx:100817368 1212.98