Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00024 ATGATGAAGATAAGTTTCCCCCATCATCATCATCATCATCTCCTCCTCTTTCTCTTGATCTCTCTTTTCTGGGCTTCCTCTGCATTTGGAGCCACCAAGATACATCCATCTGAAATGGAAGCTCTGAAAGACATAGCTAAGACTCTGGGAAAGGAAGATTGGAACTTCGACGTAGATCCCTGCGATACTTCTGATCCTGCCTTCAGTCAAACCAACTGGTTTACGGCGTACCCAGTGGATACAGAAAGTCAAAACGCTGTCGCTTGCAATTGCGCCGTTGCCCCTGATGACGCCTTTTGTCATGTTGTCAACATAACTCTGAAGAAACAAAGTCTGCCGGGCAAGCTCCCTCCAGAACTTGTCAGATTACCTTACCTTTCCGCAATCGACCTGAGCCGCAACTACCTTAGCGGTTCAATCCCTTTAAGTTGGGCCTCCCTTAATCTTCGGCACATATCTCTTCTTGGTAATCGACTAACCGGTAAAATCCCAGTGGAGCTTGCGAAGATCACTACTCTGCAACGTCTGGTCCTTGAGTTCAATCAATTTTCTGGGAATCTTCCTCCTGAGCTTGGCAATCTTCTCCAAATTGAAGGACTGGTTCTTACCTCCAACAATTTCACTGGAGACATACCTCCAACTTTCGCAAAGCTTACTAATTTGACGGATATAATGGTTCATGGGACTGGTTTGAGTGGACCGATTTCTGGAATTTCATTTCCTGAAAACGTAGAGGACTTGAGGATAAGTGACTTGAATGGACCTGATTCAACTTTTCCCGAGCTCAGAAACTTGACAAAATTGAAAACATTGATATTGAGGAGTTGCAATATCAATGGGAAAATACCTACCTATCTCTGGAGAATGGGAAATTTAAAAACCTTAGACCTGAGCTTTAACAAATTGCAAGGAAAAATTCCAGATGAGTTTGCTCACCTGTCACAATTGGATTACATGTATTTAACTGGAAATCTTCTTGATGGACCTTTGCCTAAGTTGAAAGTTGAATACATTGATCTTTCATATAACAACTTTAACAGTGGAAATGCTGGGGAGAAGAATTGTGATCAGCCAAAAGTGAACCTTTTTGGAGACCCTTTGATGGCCAATGACTCAGGGTCTGTTACTTGTATGAGAAGCACTTGTTCTCAAACCTGGTACTCTGTCAATATAAATTGCGGTGGAGATCAGGCAGCCATTGGACATACAATGTATGATGGTGATTTGGATCTAGTTAGACAAGGATTTGCAAAGAGTGGAACTAACTGGGCAATTAGCAATACTGGTCACTTTTTAGATGCAACACAAAAGGATATCTATGTCGCACAAAACAAGAGTCCCCCCCTGCCCCCTGTTGAACTGTACGGAAATGCACATGTTTCCCCTATTTCTCTGACCTATTATGCATTTTGCCTGGGAAATGGAACATACACGGTGAGTCTCCATTTTGTCGAGATAATGTTCACTGATGATCAAACATATAGAAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGGAACGGCGAATGCTGAAGGATTTCAATATTGTAACTGAAGCAAGGGGAGTTGGTAAGCTAATCATAAAAAAATTTACTGTAAATGTGACTAATGGCACCTTAAAGATTCGCTTCCATTGGGCGGGGAAAGGGACAACTGCTATACCAGAAAAGTCAGTTTATGGTCCTCTAATTTCAGCTATCTCTGTAACTTCTGACTTTCAACCCCCAAGAAACATCCCTGGAGCAGTTTTTGCTGCAATTGTGGTCGCAGGAGTGAGTATTGTCGTCCTGATATTGGGCATACTCTGGTGGAGAGGTTACCTCGGAAAAAGAAACTCATTAGCAATTGAGCTAAAGAGCTTAGATCTGCAAACTGGTTTATTTACCTTGCGCCAAATCAAAGCAGCAACGGATAACTTTGATGCATCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGCTTTCTATCAGATGGCACAATGATAGCAGTGAAGCAGCTTTCTTCTAAATCAAAGCAAGGAAACCGTGAGTTCATCAATGAGATTGGCATGATCTCTGCTTTGCAACACCCTTGTCTTGTTAAGCTCTATGGTTGTTGTGTTGAGGGGGATCAGTTGTTGTTGGTATATGAATACATGGAAAACAATAGCCTTGCTCGTGCCTTGTTTGGGCCAGAGGAATGCCGCTTAAAATTGGATTGGCCAATGAGACAGAAGATTTGTGTTGATCTTGCCCGAGGTTTGGCTTTCCTCCATGAAGAATCAAGACTAAAGATTGTTCACCGGGACATCAAGGCCACAAATGTGCTACTTGACAAAGACCTGAATGCAAAAATATCAGATTTTGGACTAGCCAAGCTTTATGAAGAGGAAAATACCCACATAAGCACTCGAATTGCTGGGACCTATGGATACATGGCACCTGAATATGCAATGCATGGCTATTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATCGTTGCTCTGGAAATTGTAAGTGGAAGGAGTAACACTTCTCGCCGACAAAAGGAAGAATGTTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGGCTATTTAATGGAGCTAGTTGATCCAAGGTTGGGTTCAGATTTTGACAGAGAGGAGGTAATGGTGATGATCAATGTGGCTCTCCTATGCACTAATCCATCTTCATCACTCAGGCCCTCCATGTCTTCAGTGCTAAGCATGCTTGAAGGAAGAACTGTAGTTCCAGAGTTCGTTTCTGATCAAAGTGAGGAAGCAAGTAAGATGAAGTTAGAGGCAATGAGACAATATTACCGAGAGATGGAAGAAAACCAGACGAATGATGAGACTGAAACTCATTCCAAGAGCCTCTTGGGGATGTCCGCTTCTTCATCTACATCAGCTGGAGATCTCTATCCTGTTCGCCTAGATTCTTCCTACTTCGAGAAAAGAAAGTCTCAGATAGAAGAATAG 2982 0.4229 MMKISFPHHHHHHLLLFLLISLFWASSAFGATKIHPSEMEALKDIAKTLGKEDWNFDVDPCDTSDPAFSQTNWFTAYPVDTESQNAVACNCAVAPDDAFCHVVNITLKKQSLPGKLPPELVRLPYLSAIDLSRNYLSGSIPLSWASLNLRHISLLGNRLTGKIPVELAKITTLQRLVLEFNQFSGNLPPELGNLLQIEGLVLTSNNFTGDIPPTFAKLTNLTDIMVHGTGLSGPISGISFPENVEDLRISDLNGPDSTFPELRNLTKLKTLILRSCNINGKIPTYLWRMGNLKTLDLSFNKLQGKIPDEFAHLSQLDYMYLTGNLLDGPLPKLKVEYIDLSYNNFNSGNAGEKNCDQPKVNLFGDPLMANDSGSVTCMRSTCSQTWYSVNINCGGDQAAIGHTMYDGDLDLVRQGFAKSGTNWAISNTGHFLDATQKDIYVAQNKSPPLPPVELYGNAHVSPISLTYYAFCLGNGTYTVSLHFVEIMFTDDQTYRSLGRRVFDVYIQERRMLKDFNIVTEARGVGKLIIKKFTVNVTNGTLKIRFHWAGKGTTAIPEKSVYGPLISAISVTSDFQPPRNIPGAVFAAIVVAGVSIVVLILGILWWRGYLGKRNSLAIELKSLDLQTGLFTLRQIKAATDNFDASNKIGEGGFGPVYKGFLSDGTMIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEECRLKLDWPMRQKICVDLARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLYEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTSRRQKEECFNLLNWAHVLKENGYLMELVDPRLGSDFDREEVMVMINVALLCTNPSSSLRPSMSSVLSMLEGRTVVPEFVSDQSEEASKMKLEAMRQYYREMEENQTNDETETHSKSLLGMSASSSTSAGDLYPVRLDSSYFEKRKSQIEE 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00024 993 ProSiteProfiles Protein kinase domain profile. 641 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00024 993 SMART serkin_6 641 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00024 993 CDD STKc_IRAK 647 914 - -
Pral4311g00024 993 Gene3D Ribonuclease Inhibitor 61 212 IPR032675 -
Pral4311g00024 993 SUPERFAMILY Protein kinase-like (PK-like) 624 922 IPR011009 -
Pral4311g00024 993 SUPERFAMILY L domain-like 75 345 - -
Pral4311g00024 993 Gene3D Phosphorylase Kinase; domain 1 610 716 - -
Pral4311g00024 993 Pfam Leucine rich repeat 267 326 IPR001611 GO:0005515
Pral4311g00024 993 Pfam Malectin domain 388 568 IPR021720 -
Pral4311g00024 993 MobiDBLite consensus disorder prediction 954 974 - -
Pral4311g00024 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 947 - -
Pral4311g00024 993 Gene3D Ribonuclease Inhibitor 213 389 IPR032675 -
Pral4311g00024 993 Gene3D - 390 574 - -
Pral4311g00024 993 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 40 211 - -
Pral4311g00024 993 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 386 573 - -
Pral4311g00024 993 MobiDBLite consensus disorder prediction 945 974 - -
Pral4311g00024 993 Gene3D Transferase(Phosphotransferase) domain 1 717 937 - -
Pral4311g00024 993 FunFam Putative LRR receptor-like serine/threonine-protein kinase 717 924 - -
Pral4311g00024 993 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 236 330 - -
Pral4311g00024 993 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 610 716 - -
Pral4311g00024 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 763 775 IPR008271 GO:0004672|GO:0006468
Pral4311g00024 993 ProSiteProfiles Leucine-rich repeat profile. 291 313 IPR001611 GO:0005515
Pral4311g00024 993 Pfam Protein tyrosine and serine/threonine kinase 644 862 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00024 Pral-Chr4311 143144 158366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00024 24 941 Receptor kinase-like Gene Family AT1G53420 52.247 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00024 PK_Tyr_Ser-Thr 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00024 - - qsa:O6P43_001072 1204.12