Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00023 ATGATGAAGATAAGTTTCCCCCATCATCATCATCATCATCTCCTCCTCTTTCTCTTGATCTCTCTTTTCTGGGCTTCCTCTGCATTTGGAGCCACCAAGATACATCCATCTGAAATGGAAGCTCTGAAAGACATAGCTAAGACTCTGGGAAAGGAAGATTGGAACTTCGACGTAGATCCCTGCGATACTTCTGATCCTGCCTTCAGTCAAACCAACTGGTTTACGGCGTACCCAGTGGATACAGAAAGTCAAAACGCTGTCGCTTGCAATTGCGCCGTTGCCCCTGATGACGCCTTTTGTCATGTTGTCAACATAACTCTGAAGAAACAAAGTCTGCCGGGCAAGCTCCCTCCAGAACTTGTCAGATTACCTTACCTTTCCGCAATCGACCTGAGCCGCAACTACCTTAGCGGTTCAATCCCTTTAAGTTGGGCCTCCCTTAATCTTCGGCACATATCTCTTCTTGGTAATCGACTAACCGGTAAAATCCCAGTGGAGCTTGCGAAGATCACTACTCTGCAACGTCTGGTCCTTGAGTTCAATCAATTTTCTGGGAATCTTCCTCCTGAGCTTGGCAATCTTCTCCAAATTGAAGGACTGGTTCTTACCTCCAACAATTTCACTGGAGACATACCTCCAACTTTCGCAAAGCTTACTAATTTGACGGATATAATGGTTCATGGGACTGGTTTGAGTGGACCGATTTCTGGAATTTCATTTCCTGAAAACGTAGAGGACTTGATATTGAGGAGTTGCAATATCAATGGGAAAATACCTACCTATCTCTGGAGAATGGGAAATTTAAAAACCTTAGACCTGAGCTTTAACAAATTGCAAGGAAAAATTCCAGATGAGTTTGCTCACCTGTCACAATTGGATTACATGTATTTAACTGGAAATCTTCTTGATGGACCTTTGCCTAAGTTGAAAGTTGAATACATTGATCTTTCATATAACAACTTTAACAGTGGAAATGCTGGGGAGAAGAATTGTGATCAGCCAAAAGTGAACCTTTTTGGAGACCCTTTGATGGCCAATGACTCAGGGTCTGTTACTTGTATGAGAAGCACTTGTTCTCAAACCTGGTACTCTGTCAATATAAATTGCGGTGGAGATCAGGCAGCCATTGGACATACAATGTATGATGGTGATTTGGATCTAGTTAGACAAGGATTTGCAAAGAGTGGAACTAACTGGGCAATTAGCAATACTGGTCACTTTTTAGATGCAACACAAAAGGATATCTATGTCGCACAAAACAAGAGTCCCCCCCTGCCCCCTGTTGAACTGTACGGAAATGCACATGTTTCCCCTATTTCTCTGACCTATTATGCATTTTGCCTGGGAAATGGAACATACACGGTGAGTCTCCATTTTGTCGAGATAATGTTCACTGATGATCAAACATATAGAAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGGAACGGCGAATGCTGAAGGATTTCAATATTGTAACTGAAGCAAGGGGAGTTGGTAAGCTAATCATAAAAAAATTTACTGTAAATGTGACTAATGGCACCTTAAAGATTCGCTTCCATTGGGCGGGGAAAGGGACAACTGCTATACCAGAAAAGTCAGTTTATGGTCCTCTAATTTCAGCTATCTCTGTAACTTCTGACTTTCAACCCCCAAGAAACATCCCTGGAGCAGTTTTTGCTGCAATTGTGGTCGCAGGAGTGAGTATTGTCGTCCTGATATTGGGCATACTCTGGTGGAGAGGTTACCTCGGAAAAAGAAACTCATTAGCAATTGAGCTAAAGAGCTTAGATCTGCAAACTGGTTTATTTACCTTGCGCCAAATCAAAGCAGCAACGGATAACTTTGATGCATCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGCTTTCTATCAGATGGCACAATGATAGCAGTGAAGCAGCTTTCTTCTAAATCAAAGCAAGGAAACCGTGAGTTCATCAATGAGATTGGCATGATCTCTGCTTTGCAACACCCTTGTCTTGTTAAGCTCTATGGTTGTTGTGTTGAGGGGGATCAGTTGTTGTTGGTATATGAATACATGGAAAACAATAGCCTTGCTCGTGCCTTGTTTGGGCCAGAGGAATGCCGCTTAAAATTGGATTGGCCAATGAGACAGAAGATTTGTGTTGATCTTGCCCGAGGTTTGGCTTTCCTCCATGAAGAATCAAGACTAAAGATTGTTCACCGGGACATCAAGGCCACAAATGTGCTACTTGACAAAGACCTGAATGCAAAAATATCAGATTTTGGACTAGCCAAGCTTTATGAAGAGGAAAATACCCACATAAGCACTCGAATTGCTGGGACCTATGGATACATGGCACCTGAATATGCAATGCATGGCTATTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATCGTTGCTCTGGAAATTGTAAGTGGAAGGAGTAACACTTCTCGCCGACAAAAGGAAGAATGTTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGGCTATTTAATGGAGCTAGTTGATCCAAGGTTGGGTTCAGATTTTGACAGAGAGGAGGTAATGGTGATGATCAATGTGGCTCTCCTATGCACTAATCCATCTTCATCACTCAGGCCCTCCATGTCTTCAGTGCTAAGCATGCTTGAAGGAAGAACTGTAGTTCCAGAGTTCGTTTCTGATCAAAGTGAGGAAGCAAGTAAGATGAAGTTAGAGGCAATGAGACAATATTACCGAGAGATGGAAGAAAACCAGACGAATGATGAGACTGAAACTCATTCCAAGAGCCTCTTGGGGATGTCCGCTTCTTCATCTACATCAGCTGGAGATCTCTATCCTGTTCGCCTAGATTCTTCCTACTTCGAGAAAAGAAAGTCTCAGATAGAAGAATAG 2910 0.4241 MMKISFPHHHHHHLLLFLLISLFWASSAFGATKIHPSEMEALKDIAKTLGKEDWNFDVDPCDTSDPAFSQTNWFTAYPVDTESQNAVACNCAVAPDDAFCHVVNITLKKQSLPGKLPPELVRLPYLSAIDLSRNYLSGSIPLSWASLNLRHISLLGNRLTGKIPVELAKITTLQRLVLEFNQFSGNLPPELGNLLQIEGLVLTSNNFTGDIPPTFAKLTNLTDIMVHGTGLSGPISGISFPENVEDLILRSCNINGKIPTYLWRMGNLKTLDLSFNKLQGKIPDEFAHLSQLDYMYLTGNLLDGPLPKLKVEYIDLSYNNFNSGNAGEKNCDQPKVNLFGDPLMANDSGSVTCMRSTCSQTWYSVNINCGGDQAAIGHTMYDGDLDLVRQGFAKSGTNWAISNTGHFLDATQKDIYVAQNKSPPLPPVELYGNAHVSPISLTYYAFCLGNGTYTVSLHFVEIMFTDDQTYRSLGRRVFDVYIQERRMLKDFNIVTEARGVGKLIIKKFTVNVTNGTLKIRFHWAGKGTTAIPEKSVYGPLISAISVTSDFQPPRNIPGAVFAAIVVAGVSIVVLILGILWWRGYLGKRNSLAIELKSLDLQTGLFTLRQIKAATDNFDASNKIGEGGFGPVYKGFLSDGTMIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEECRLKLDWPMRQKICVDLARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLYEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTSRRQKEECFNLLNWAHVLKENGYLMELVDPRLGSDFDREEVMVMINVALLCTNPSSSLRPSMSSVLSMLEGRTVVPEFVSDQSEEASKMKLEAMRQYYREMEENQTNDETETHSKSLLGMSASSSTSAGDLYPVRLDSSYFEKRKSQIEE 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00023 969 ProSiteProfiles Protein kinase domain profile. 617 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00023 969 SUPERFAMILY L domain-like 75 323 - -
Pral4311g00023 969 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 40 211 - -
Pral4311g00023 969 SUPERFAMILY Protein kinase-like (PK-like) 600 898 IPR011009 -
Pral4311g00023 969 MobiDBLite consensus disorder prediction 921 950 - -
Pral4311g00023 969 Gene3D Phosphorylase Kinase; domain 1 586 692 - -
Pral4311g00023 969 Pfam Malectin domain 364 544 IPR021720 -
Pral4311g00023 969 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 923 - -
Pral4311g00023 969 Pfam Leucine rich repeat 243 302 IPR001611 GO:0005515
Pral4311g00023 969 Gene3D Ribonuclease Inhibitor 239 337 IPR032675 -
Pral4311g00023 969 Gene3D Ribonuclease Inhibitor 35 238 IPR032675 -
Pral4311g00023 969 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 362 549 - -
Pral4311g00023 969 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 586 692 - -
Pral4311g00023 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Pral4311g00023 969 Gene3D Transferase(Phosphotransferase) domain 1 693 913 - -
Pral4311g00023 969 CDD STKc_IRAK 623 890 - -
Pral4311g00023 969 SMART serkin_6 617 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4311g00023 969 Gene3D - 361 550 - -
Pral4311g00023 969 FunFam Putative LRR receptor-like serine/threonine-protein kinase 693 900 - -
Pral4311g00023 969 Pfam Protein tyrosine and serine/threonine kinase 620 838 IPR001245 GO:0004672|GO:0006468
Pral4311g00023 969 MobiDBLite consensus disorder prediction 930 950 - -
Pral4311g00023 969 ProSiteProfiles Leucine-rich repeat profile. 267 289 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00023 Pral-Chr4311 143144 158366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00023 29 917 Receptor kinase-like Gene Family AT1G53420 50.577 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4311g00023 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00023 - - qsa:O6P43_001079 1123.23