Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00017 ATGTCATCTTCTTCCTACGAACTTGTCCTTACCAGTTCTCCAGATGGCCCCATCGTCGCCTACGATGCCTCCACTGGGGTTGAAGTCACTCGCTTTCCAGGCACACGGTCACCCCGCCGGGGCCTCACTGTGGCCGGAAATAGCTTCATTGCCGCGTCTCATGTGTCACCCGACACGGCCGCGGTGTCCATTCACCTCTACAACTGGCACACTTCAAGTGTGCTTCACAGATTCTCCGTGCCTGAGTTTGTTGCCCCACTTGCTGCTACTCCCGACGGCGGCTATATCTTCGCCGGAGGCCAGTCTGGAACCATCCATTGCTTCTCTGTTCCTTCTGGGAATGTGATCAAGTCTTTTCCTGCTCACACAAAACCCATCTCTTGTCTCCAACTCAGTATTGATGGGTCATTGGTAATTTCAGGCAGTGATGATGGAAGCATTATGGTGATCCCAACTTTTCAAATCGTAGAATCATCAGACTCAAACTCAAGCTCAAAAGACTTGATTCTGCAGCATTGGAAGAAGGCACATTCAGATTCAGTCACAGCTTTGAGCACAGGAATAGGGCTATGCAACTCCATGCTTGTCTCGTCCTCGCTAGATTCAACCTGCAAGTTCTGGAATCTTCTAGAGGGAACCCTCCTTCGCACAGTGACCTTCCCTTGTGCCATAAATGGTCTGGCCATGGCCATAGACTTGTCATCATCAGACTCACACTTGTTCGCTGCAGGATCAGACGGGTCGGTTTACAAAGCATCAATGAATAAGGCCAAAAAACCCAGAAAACCACAGAATAACAACAACGAAGCTGATGATGATCAAGAACTGATGAAGAAATGGAACAAAAGCCACGTGGGGTCCACTGAATCAGTGGTTGTGGTGAATGAAGGGAGGAATCTGGTGTCTGCAGGTGAAGATGGTAGCGTGTGGATGTGGGAGATTGACACAGAAGAAGTAACAATGGTGATAAAAGATAACAGTAATGGATTAATGGAAGGAAGTATCAGTGATATGATAGTGGCTAGTGGGATTACTGAATATAGAGGTAAAGGGAAGAGTAGTGATAATGGTGGTGGTTGCAGTAATAGGTTGACTTCATCAGAGCTGTTGAAAGAAGAAGTGGTTAGGTCAATGAAGAAGATAATGGAGGTTGGAGAAGTGCTGAGAGTGGTGGAAGAAGATAAGAGGAGAGCCATTAATATGCTGGAGTCTGCAATTGCTATGTATGAGAAGCTCTTGGAGCTCATACTTGAAGAAGCTTTGAAAGGTTCTAGTGATGGGAATTCGTTTGGATCCATATTTATAACTTTTTAA 1314 0.4642 MSSSSYELVLTSSPDGPIVAYDASTGVEVTRFPGTRSPRRGLTVAGNSFIAASHVSPDTAAVSIHLYNWHTSSVLHRFSVPEFVAPLAATPDGGYIFAGGQSGTIHCFSVPSGNVIKSFPAHTKPISCLQLSIDGSLVISGSDDGSIMVIPTFQIVESSDSNSSSKDLILQHWKKAHSDSVTALSTGIGLCNSMLVSSSLDSTCKFWNLLEGTLLRTVTFPCAINGLAMAIDLSSSDSHLFAAGSDGSVYKASMNKAKKPRKPQNNNNEADDDQELMKKWNKSHVGSTESVVVVNEGRNLVSAGEDGSVWMWEIDTEEVTMVIKDNSNGLMEGSISDMIVASGITEYRGKGKSSDNGGGCSNRLTSSELLKEEVVRSMKKIMEVGEVLRVVEEDKRRAINMLESAIAMYEKLLELILEEALKGSSDGNSFGSIFITF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00017 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 174 217 IPR001680 GO:0005515
Pral4311g00017 437 SMART WD40_4 71 109 IPR001680 GO:0005515
Pral4311g00017 437 SMART WD40_4 273 313 IPR001680 GO:0005515
Pral4311g00017 437 SMART WD40_4 112 151 IPR001680 GO:0005515
Pral4311g00017 437 SMART WD40_4 211 253 IPR001680 GO:0005515
Pral4311g00017 437 SMART WD40_4 166 208 IPR001680 GO:0005515
Pral4311g00017 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 119 149 IPR001680 GO:0005515
Pral4311g00017 437 Coils Coil 399 419 - -
Pral4311g00017 437 MobiDBLite consensus disorder prediction 254 273 - -
Pral4311g00017 437 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 281 318 - -
Pral4311g00017 437 Pfam WD domain, G-beta repeat 114 149 IPR001680 GO:0005515
Pral4311g00017 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 281 322 IPR001680 GO:0005515
Pral4311g00017 437 Gene3D - 152 357 IPR015943 GO:0005515
Pral4311g00017 437 ProSitePatterns Trp-Asp (WD) repeats signature. 300 314 IPR019775 -
Pral4311g00017 437 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 7 318 IPR011047 -
Pral4311g00017 437 ProSitePatterns Trp-Asp (WD) repeats signature. 195 209 IPR019775 -
Pral4311g00017 437 Gene3D - 2 150 IPR015943 GO:0005515
Pral4311g00017 437 PANTHER WD-REPEAT PROTEIN 18 7 419 IPR045227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00017 Pral-Chr4311 95951 97454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00017 96 219 U-box Gene Family AT1G04510 31.452 8.08e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00017 K14829 - qsa:O6P43_029232 400.593