Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00016 ATGAAGATTCAGTGCAACGTGTGTGAGGCGGCGGAGGCGGAGGTTCTGTGCTGCGCGGACGAGGCGGCGCTATGTCGGCAATGCGACGAGAAGGTTCATGCAGCTAATAAGCTGGCTACTAAGCACCAGAGGGTTCCTCTGTCTACCTCTTCCTCTCACATGCCCAAATGTGATATTTGTCAGGAAACAGCTGGCTATTTCTTCTGTCTGGAGGACCGAGCCTTACTATGCAGAAAATGTGATGTGGCAATACACACAGCAAATTCCTATGTCTCTGCTCATCGGAGGTTTCTGCTTACTGGTGTAAGAGTGGGTCTTGAAGCTACTGAGCCTGTTGCTCCATCGTCCTCCATGAAGTCAGATTCTGGGGGAAAAGTGTCAGATGTGGTATCTACTTCTATCTCCAAGAAGGTTTCTTCAACGCCTCAGCCATCTGAATACAATGAATTGTTACCTACCCAAGTTGGGGGAATTGAGGAGTTTCAACCAACCAAAGTGTCTTATGGTGGTGGTTCTACTAACTGGCCGCTTGATGAATATTTTGGTTTCAATGAATTCAGTCAAAATTTCAATTTCATGGATAATGCCAATGGTCCATCCAAGGCTGAAAGCAGCAAGTTTGGGGATTCGGATTCTTCTGTATTAAGATCTAGTGAAGAGGAAATGGATTATGATGATCACTTGGGGTTTGTTCCGGATTCGTCTTGGACGGTTCCTCAGATCCCTTCCCCTCCTACGGCTTCAGGCTTATATTGGCCAAAAGATCCTCGATATTCATCGACTAATAATGCTATGTTTGTTCCTGACATATGTTCTCCTCACATCCAACAGCCTCTTTATGCTCAGAGAAATAGTACGTTATCAAAGCGGCGAAGGCGACAGTAA 885 0.4599 MKIQCNVCEAAEAEVLCCADEAALCRQCDEKVHAANKLATKHQRVPLSTSSSHMPKCDICQETAGYFFCLEDRALLCRKCDVAIHTANSYVSAHRRFLLTGVRVGLEATEPVAPSSSMKSDSGGKVSDVVSTSISKKVSSTPQPSEYNELLPTQVGGIEEFQPTKVSYGGGSTNWPLDEYFGFNEFSQNFNFMDNANGPSKAESSKFGDSDSSVLRSSEEEMDYDDHLGFVPDSSWTVPQIPSPPTASGLYWPKDPRYSSTNNAMFVPDICSPHIQQPLYAQRNSTLSKRRRRQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00016 294 MobiDBLite consensus disorder prediction 195 212 - -
Pral4311g00016 294 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pral4311g00016 294 MobiDBLite consensus disorder prediction 195 217 - -
Pral4311g00016 294 CDD Bbox1_BBX-like 5 47 - -
Pral4311g00016 294 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pral4311g00016 294 SMART bboxneu5 52 99 IPR000315 GO:0008270
Pral4311g00016 294 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 273 - -
Pral4311g00016 294 Pfam B-box zinc finger 54 94 IPR000315 GO:0008270
Pral4311g00016 294 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Pral4311g00016 294 Gene3D Classic Zinc Finger 1 93 - -
Pral4311g00016 294 FunFam B-box zinc finger protein 22 1 93 - -
Pral4311g00016 294 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00016 Pral-Chr4311 89786 93946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00016 1 293 C2C2-CO-like Transcription Factor Family AT1G78600 46.108 2.40e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4311g00016 zf-B_box 2.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00016 - - gmx:100808889 402.134