Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4311g00016 | ATGAAGATTCAGTGCAACGTGTGTGAGGCGGCGGAGGCGGAGGTTCTGTGCTGCGCGGACGAGGCGGCGCTATGTCGGCAATGCGACGAGAAGGTTCATGCAGCTAATAAGCTGGCTACTAAGCACCAGAGGGTTCCTCTGTCTACCTCTTCCTCTCACATGCCCAAATGTGATATTTGTCAGGAAACAGCTGGCTATTTCTTCTGTCTGGAGGACCGAGCCTTACTATGCAGAAAATGTGATGTGGCAATACACACAGCAAATTCCTATGTCTCTGCTCATCGGAGGTTTCTGCTTACTGGTGTAAGAGTGGGTCTTGAAGCTACTGAGCCTGTTGCTCCATCGTCCTCCATGAAGTCAGATTCTGGGGGAAAAGTGTCAGATGTGGTATCTACTTCTATCTCCAAGAAGGTTTCTTCAACGCCTCAGCCATCTGAATACAATGAATTGTTACCTACCCAAGTTGGGGGAATTGAGGAGTTTCAACCAACCAAAGTGTCTTATGGTGGTGGTTCTACTAACTGGCCGCTTGATGAATATTTTGGTTTCAATGAATTCAGTCAAAATTTCAATTTCATGGATAATGCCAATGGTCCATCCAAGGCTGAAAGCAGCAAGTTTGGGGATTCGGATTCTTCTGTATTAAGATCTAGTGAAGAGGAAATGGATTATGATGATCACTTGGGGTTTGTTCCGGATTCGTCTTGGACGGTTCCTCAGATCCCTTCCCCTCCTACGGCTTCAGGCTTATATTGGCCAAAAGATCCTCGATATTCATCGACTAATAATGCTATGTTTGTTCCTGACATATGTTCTCCTCACATCCAACAGCCTCTTTATGCTCAGAGAAATAGTACGTTATCAAAGCGGCGAAGGCGACAGTAA | 885 | 0.4599 | MKIQCNVCEAAEAEVLCCADEAALCRQCDEKVHAANKLATKHQRVPLSTSSSHMPKCDICQETAGYFFCLEDRALLCRKCDVAIHTANSYVSAHRRFLLTGVRVGLEATEPVAPSSSMKSDSGGKVSDVVSTSISKKVSSTPQPSEYNELLPTQVGGIEEFQPTKVSYGGGSTNWPLDEYFGFNEFSQNFNFMDNANGPSKAESSKFGDSDSSVLRSSEEEMDYDDHLGFVPDSSWTVPQIPSPPTASGLYWPKDPRYSSTNNAMFVPDICSPHIQQPLYAQRNSTLSKRRRRQ | 294 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4311g00016 | 294 | MobiDBLite | consensus disorder prediction | 195 | 212 | - | - | |
Pral4311g00016 | 294 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
Pral4311g00016 | 294 | MobiDBLite | consensus disorder prediction | 195 | 217 | - | - | |
Pral4311g00016 | 294 | CDD | Bbox1_BBX-like | 5 | 47 | - | - | |
Pral4311g00016 | 294 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
Pral4311g00016 | 294 | SMART | bboxneu5 | 52 | 99 | IPR000315 | GO:0008270 | |
Pral4311g00016 | 294 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 273 | - | - | |
Pral4311g00016 | 294 | Pfam | B-box zinc finger | 54 | 94 | IPR000315 | GO:0008270 | |
Pral4311g00016 | 294 | ProSiteProfiles | Zinc finger B-box type profile. | 52 | 99 | IPR000315 | GO:0008270 | |
Pral4311g00016 | 294 | Gene3D | Classic Zinc Finger | 1 | 93 | - | - | |
Pral4311g00016 | 294 | FunFam | B-box zinc finger protein 22 | 1 | 93 | - | - | |
Pral4311g00016 | 294 | CDD | Bbox1_BBX-like | 56 | 99 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4311g00016 | Pral-Chr4311 | 89786 | 93946 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4311g00016 | 1 | 293 | C2C2-CO-like Transcription Factor Family | AT1G78600 | 46.108 | 2.40e-83 | 252 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Pral4311g00016 | zf-B_box | 2.1e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4311g00016 | - | - | gmx:100808889 | 402.134 |