Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00009 ATGGTTCACTTTCAGAGCGATCCTATCCCCGGAAATAACTGTTACGGTAACGGTAGTTCTCATCATTTTCCCGGTTCCGATGAAGGGCTAATAAGAGAAAGAGAGCTAAGTGGCAAGGGCTTTCATTTGAACAAATCAAGTGGTAATAATCATGGGGGGCCTTTTAGACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCAGTTAGGACAAGTGAAGACTCGTGGTCCATGGAGATGAGTGCTGGCGGTCTTGTGAGAGCTCTTTTAGGTGTCAAGGAGATTGAGGCAATCTGGATCGGTTGGGCTGGTGTCAATGTGCCGGATGAGATTGGACAGAAGACACTTACTAAGGCTCTGGCTGAAAAGAGGTGCATTCCAGTAATTCTTGATGAAGAGATTGTCCATCAGTATTATAATGGTTACTGCAATAACATCTTGTGGCCCCTTTTTCACTACCTGGGACTTCCACAAGAAGATCGCCTTGCCACCACAAGGAATTTCCAATCTCAGTTTGAAGCATATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAAAGAACACTATCAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCAAAATTCTTAAAGGATTATGACAGGAACATGAAAGTTGGCTGGTTTCTCCACACGCCATTTCCGTCTTCAGAAATTCATAGGATGCTGCCATCTCGATCAGAGCTCCTGCATTCTGTTATTGCGGCTGATTTAGTTGCTTTTCACACCTATGATTATGCACGGCACTTTGTTAGCGCTTGCACTCGTATTCTAGGACTTGAGGGTACCCCTAAAGGGGTTGAAGATCAAGGGAGGTTGACTCGAGTTACTGCATATCCGATTGGGATAGACTCAGATCGGTTCATATGTGCACTTGAGCTTCCTCGAGTTAAGGCTATCATCAGAGACTTCGAACAAAGATTTGAAGGAAGAAAGGTAATGTTAGGTGTTGATCGTCTTGATATGATTAAGGGAATTCCTCAGAAAATCCTAGCATTTGAAAAATTTCTTGAAGAGAATGCCTATTGGCATGATAAAGTAGTTTTAGTTCAAATTGCTGTGCCAACAAGAACAGATGTTCTTGAATATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGGAGATTTGGATCACTGACTGCTGTTCCAGTACTTCACCTGGATCGCTCTCTTGATTTTCATGAACTATGTGCTTTGTATGCTGTAACTGATGTAGCCCTTGTGACATCTTTGAGGGATGGGATGAATCTTGTCAGCTACGAATATGTGGCTTGCCAGGAGAGAAAGAAGGGGGTACTCGTTCTTAGTGAATTTGCTGGTGCAGCACAGTCTCTAGGTGCTGGTGCAATTCTGGTTAACCCTTGGAACGTCACAGAAGTTGCTGCTGCTATTGACCAGGCTCTGAATATGCCATCTGATGAAAGAGAGAAGAGGCATAGACGTAACTTTTCTCATGTAAAAACCCACACTGCTCAGAAATGGGCAGAAACTCTTGTAAGTGAACTGAACCAAACTGTTGCCGAGCAACAACGAAGGACAAGGCGAGTTCCAGCCACACTTCCAACCAAGGATGTGGTGGAACGTTATCTGCAGTCAACTAACCGGTTGATTATTTTGGGATTCAATGGGTGTTTAACTGAACCAGTCGAGAAAAGAGATGGTCAGATTAAAGAGATGGAACTTGAGGTGCATCCAGAATTAAAACAGCCATTGACAGAACTATGCAGTGACCCAAAGACCACAGTTGTTATTCTTAGTGGAAGTGATAGAGTAGTCTTAGAGGAGAATTTTAGGGAGTATGACTTGTGGTTGGCCGCAGAGAATGGTATGTTTATACACCCTGCAAAAGGAATATGGATGTCAACAATGCCGGAGCTTCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTATTGAATACTTCACGGAAAGAACACCTCGGTCACATTTTGAAGAACGGGAAACATCAATCGTGTGGAATTACAAATATGCAGATGTTGAATTTGGAAGACTGCAAGCGAGAGACTTGCTGCAGCATCTCTGGACAGGTCCAATCTCTAATGCAACAGTTGATGTAGTTCATGGTAGTCGATCTGTTGAAGTGCGTGCTGTTGGTATAACAAAGGGAGCAGCTATGGACCGCATCCTAGGTCAAATAGCAAACTGTCAATCCATGACATCACCATTTGATTATGTCCTTTGTATAGGACATTTTCTGGCAAAGGATGAAGATGTTTTTACCTTCTTCGAGCCTGCGTTCCCTCCGACTGATTTGGCTCTTTCACGAGCAAAGGAGACGGAGAGAGTTGAGTTTTGTGCTGAGAAGAGATTGCCTTTGAGGACCCCAACCGGTAAAAGTGGACCAAAGGCATCCCAAAGTAATGCTCAGAGGCCAAAGTCAAATCCTGAGATCTCTAGTGCACCTTGGATCCCAACCCTTGGAACTGAAACAATTTCATGGGATATCCTAAACCTCAAGAAGGAGAATTACTTCTCCTGTGCTGTCGGACGGAATCAATCAAGTGCTCGGTATACGCTTGGATCATCATCAGATGATGTGGTTGCTTTTCTGAAGAAACTGGCTGCTGCATCTTTGGACTCTTCATCAAGTTAA 2676 0.4365 MVHFQSDPIPGNNCYGNGSSHHFPGSDEGLIRERELSGKGFHLNKSSGNNHGGPFRQRLLVVANRLPVSAVRTSEDSWSMEMSAGGLVRALLGVKEIEAIWIGWAGVNVPDEIGQKTLTKALAEKRCIPVILDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRNFQSQFEAYKKANQMFADVVKEHYQEGDVVWCHDYHLMFLPKFLKDYDRNMKVGWFLHTPFPSSEIHRMLPSRSELLHSVIAADLVAFHTYDYARHFVSACTRILGLEGTPKGVEDQGRLTRVTAYPIGIDSDRFICALELPRVKAIIRDFEQRFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWHDKVVLVQIAVPTRTDVLEYQKLTSQVHEIVGRINGRFGSLTAVPVLHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEYVACQERKKGVLVLSEFAGAAQSLGAGAILVNPWNVTEVAAAIDQALNMPSDEREKRHRRNFSHVKTHTAQKWAETLVSELNQTVAEQQRRTRRVPATLPTKDVVERYLQSTNRLIILGFNGCLTEPVEKRDGQIKEMELEVHPELKQPLTELCSDPKTTVVILSGSDRVVLEENFREYDLWLAAENGMFIHPAKGIWMSTMPELLNMEWVDSVKHVIEYFTERTPRSHFEERETSIVWNYKYADVEFGRLQARDLLQHLWTGPISNATVDVVHGSRSVEVRAVGITKGAAMDRILGQIANCQSMTSPFDYVLCIGHFLAKDEDVFTFFEPAFPPTDLALSRAKETERVEFCAEKRLPLRTPTGKSGPKASQSNAQRPKSNPEISSAPWIPTLGTETISWDILNLKKENYFSCAVGRNQSSARYTLGSSSDDVVAFLKKLAAASLDSSSS 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00009 891 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 645 725 - -
Pral4311g00009 891 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 57 525 - -
Pral4311g00009 891 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 58 524 IPR012766 GO:0003825|GO:0005992
Pral4311g00009 891 MobiDBLite consensus disorder prediction 1 20 - -
Pral4311g00009 891 SUPERFAMILY HAD-like 555 882 IPR036412 -
Pral4311g00009 891 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 50 883 IPR001830 GO:0003824|GO:0005992
Pral4311g00009 891 Gene3D Glycogen Phosphorylase B; 305 508 - -
Pral4311g00009 891 Gene3D Glycogen Phosphorylase B; 50 304 - -
Pral4311g00009 891 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 305 508 - -
Pral4311g00009 891 Gene3D - 644 725 - -
Pral4311g00009 891 MobiDBLite consensus disorder prediction 806 829 - -
Pral4311g00009 891 MobiDBLite consensus disorder prediction 800 829 - -
Pral4311g00009 891 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 50 304 - -
Pral4311g00009 891 Pfam Glycosyltransferase family 20 58 523 IPR001830 GO:0003824|GO:0005992
Pral4311g00009 891 CDD HAD_TPP 556 772 - -
Pral4311g00009 891 Pfam Trehalose-phosphatase 578 773 IPR003337 GO:0003824|GO:0005992
Pral4311g00009 891 CDD GT20_TPS 58 523 IPR001830 GO:0003824|GO:0005992
Pral4311g00009 891 Gene3D - 579 767 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00009 Pral-Chr4311 59665 70479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4311g00009 56 891 Trehalose Biosynthesis Gene Families AT1G78580 73.020 0.0 1298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00009 K16055 - qsa:O6P43_001098 1347.41