Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00003 ATGAGAGTAGCGTGGTTTCCTATGGCTTCCGGTGTATTCCTCAACGGACTCCGGCTGCGTTTATCTTGCTCGGGATGCCGGAAGCCGCCGGAATCCATGCTTCCTTTTCTCCGCGGAGCCATACCTTATGGGAGACATATTATCAACGCAATATCTCCTTCAACATTACAGCATCAACTTTGTCTTCAAACCCAGTGGTTTTCTATGAGGTACGCTAACTCAAACGCCTCAAACGGGAATTCTTTCACTGTCTCTTATCTCATTGACACCTGTGGCTTCTCACCCCAAGAAGCTGAAGCAGCTTCTAAGCGCGTCAGCTTCGAAACGAGAGAGAAGCCAGATTTGGTTATCAAGTTCCTGAAGAGTCATGGATTCTCACGGCTCCAGATTCTTCATTTCATTAAATCGGTTCCAGAATTCCTTCGATTTGATCCTGAGAAGACCTTTATGCCCAAGATTGAATTTTTCAAATCCAGAGGCGTTTCGAGCTCGCACATCCCTAGGCTTGTGTGTAATTGTCCTAATATCATGAGAAGAAGCTTAAGTAACCACCTCATTCCTTCCTTCGATTTCCTTCGAGATTTGCTTGGATCTGATGAGAAGCTCGTTAAAGCTCTTCAATATTGCTCGGCCATTCTTGTTGATTCTAAAGCCTCTGTGTTGCATAAAATAGAGCTACTGCGAGAAGCAAGAGTTCCTCAATCAAATATCATCAAATTTTTGCAGTTTTACAGTAGATCATTGGCTTATAGTACTGGTCGATTTAAGAAGATTGTGGAGGAAGTGAAAGAACTTGGTTTTGATCCTTGGACGTTTCAATTTCTTATGGCTGTTCATGTATCCTTATCCTCAAAAGAATCCGCACGGGCTAAAAAGGTTTATGTTTATAAGAAGTGGGGTTGGTCTGACAATGACATTCTTGCAGCATTTAGAAGGCTCCCCATCTGTATGACTCTGTCAGAAGATCAGATTGATGCAAAATTAGAGTTTCTTGTCCATAAATTGGGCTGTAATCCTTCCATGATTTGCACATATCCTAATGTTTTGGGATATAGTTTGAAAAAACGAATTGTTCCAAGAGGTGCTGTCCTTCAAGTTCTGTTGTCAAAGGGGCTGTTGAAAAGCGAAACTTTGCTCGCAAAATTTGCGCTTACTGAAAAGGACTTTTTAAGGAGGGTTGTCCTTTGTCATGTGCAAGAAGAAGCTAGTGAGTTAATGGAGTTGTATCTCACAAAACTGGATCAAGCAAGGTGA 1254 0.4211 MRVAWFPMASGVFLNGLRLRLSCSGCRKPPESMLPFLRGAIPYGRHIINAISPSTLQHQLCLQTQWFSMRYANSNASNGNSFTVSYLIDTCGFSPQEAEAASKRVSFETREKPDLVIKFLKSHGFSRLQILHFIKSVPEFLRFDPEKTFMPKIEFFKSRGVSSSHIPRLVCNCPNIMRRSLSNHLIPSFDFLRDLLGSDEKLVKALQYCSAILVDSKASVLHKIELLREARVPQSNIIKFLQFYSRSLAYSTGRFKKIVEEVKELGFDPWTFQFLMAVHVSLSSKESARAKKVYVYKKWGWSDNDILAAFRRLPICMTLSEDQIDAKLEFLVHKLGCNPSMICTYPNVLGYSLKKRIVPRGAVLQVLLSKGLLKSETLLAKFALTEKDFLRRVVLCHVQEEASELMELYLTKLDQAR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00003 417 FunFam Mitochondrial transcription termination factor-like 181 401 - -
Pral4311g00003 417 PANTHER CGI-12 PROTEIN-RELATED 78 398 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 SMART mt_12 339 373 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 SMART mt_12 167 198 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 SMART mt_12 203 233 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 SMART mt_12 238 268 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 Pfam mTERF 280 389 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 Pfam mTERF 117 268 IPR003690 GO:0003690|GO:0006355
Pral4311g00003 417 Gene3D Transcription termination factor 3, mitochondrial 182 402 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00003 Pral-Chr4311 29007 31569 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4311g00003 mTERF 2.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00003 K15031 - qsa:O6P43_003531 351.673