Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4311g00002 ATGGCTATACCAAGAATTAAGTTCAAGACCCCAACAGAGTCACAGAGGAGCTCCATTGTTCCAGAAAGGGGGAGTACTTTCCCAATTCAAAAACATTCCGAAGACAATGAGGCTGTGGTAAACATTGTTAAGTGTGGTAGTTCTTGGACCCCTGCCAACGCGTTTTCTTTGCCTGAGCATTGGAATCTGATGGAATCCATGTCTCGTTTTCTGAGCAGAGCGATCGGTTTTCGGAAGCACATTATCAACGCAACCTCTCCTTCAAGATTTCAACATCTGGTTTGTGGTCAAATCCAGTGGCTTTCTGTGGGGTACGCAAATTCAACCGCCTCAAATGGCCATTCTTTCACTGTTTCATATCTGGTTGACGTATGTGGCTTCTCAGCTAAACAAGCTGCTTCCGCTTCTGAGCGTGTCAGCTTCGAAACGCGAGATAAGCCAGATTTAGTTATCAATTTCCTGCAAAAACATGGACTTTCTCAATCCCAGATTGCTCGTTTCATTAGACATGATCCATTGATTCTTCGATGTGACCCTGACAAAACCCTTCTGCCCAAGATTGAGTTTTTAAAATCCATGGGTGTTTCGAGCTCAAGCATCCCTAAGCTCTTGTGCAGTTCTCCTGCCATCATGCGGAGAAGCCTAAGCAATCAGCTCATTCCTTCCTTTGATTTCTTCCGGGGTTTGTTTCAATCTGATGAGAAGCTCACTCAAGCTCTTACATATTGCTCGGGCATCCTTCTTTATCTTAACACTCATGTCGTGCCTAATATGAAGCTATTGCGAGAAGCAGGAGTTTCTGAATCAAATGTCATGAAATTGTTGCAATTTTTCCCTAGGGCACTAACTACTAATACTGCTCGGTTTAGGGAAGTTGTGGAAGAAGTGAAGGAACTTGGGTTTAATCCTTTGAAGATTCAATTTGTTATGGCTGTTCGGGTATACTTATCCTTAAGCACATCCACACGGGCAAACAAGTTTGATGTTTATAAGAAGTGGGGTTGGTCTGACCATGACATTCTCGCGGCATTTAGGAAGTACCCCTTTTGTATGACCGTGGCAGACGATAAGATTGATGCAGTAATGGAGTTTCTTGTCCACAAATTGGGCTGTGAGCCTTCCACCATTAACAAAAATCCTTCCGTTTTGGCATTGAGTTTGAAACGGCGAATTATGCCCAGAGGTGCTGTCATTCAAGCTCTGTTGTCAAAGGGTCTGATAGAAAGAAAAGCATTGGTTGCAGCATTTATATATACTGAAGATGGCTTTTTAAGGAGATTTGTCATTCGTCATGGGCCAGAAGCTGGTGGATTATTGGAGTTGTATCAGTCTAAACTGGATCTGGCAAGGTGA 1353 0.4331 MAIPRIKFKTPTESQRSSIVPERGSTFPIQKHSEDNEAVVNIVKCGSSWTPANAFSLPEHWNLMESMSRFLSRAIGFRKHIINATSPSRFQHLVCGQIQWLSVGYANSTASNGHSFTVSYLVDVCGFSAKQAASASERVSFETRDKPDLVINFLQKHGLSQSQIARFIRHDPLILRCDPDKTLLPKIEFLKSMGVSSSSIPKLLCSSPAIMRRSLSNQLIPSFDFFRGLFQSDEKLTQALTYCSGILLYLNTHVVPNMKLLREAGVSESNVMKLLQFFPRALTTNTARFREVVEEVKELGFNPLKIQFVMAVRVYLSLSTSTRANKFDVYKKWGWSDHDILAAFRKYPFCMTVADDKIDAVMEFLVHKLGCEPSTINKNPSVLALSLKRRIMPRGAVIQALLSKGLIERKALVAAFIYTEDGFLRRFVIRHGPEAGGLLELYQSKLDLAR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4311g00002 450 SMART mt_12 341 372 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 SMART mt_12 237 267 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 SMART mt_12 272 302 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 SMART mt_12 306 336 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 SMART mt_12 373 407 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 Gene3D Transcription termination factor 3, mitochondrial 217 434 IPR038538 -
Pral4311g00002 450 Pfam mTERF 246 423 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 Pfam mTERF 151 304 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 PANTHER CGI-12 PROTEIN-RELATED 112 431 IPR003690 GO:0003690|GO:0006355
Pral4311g00002 450 FunFam Mitochondrial transcription termination factor-like 215 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4311g00002 Pral-Chr4311 5116 11854 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4311g00002 mTERF 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4311g00002 K15031 - qsa:O6P43_003531 354.755