Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4310g00004 ATGTTGCCTTCTCTCCGCAAAGCTATCGGTATCAGCGCAGTCTCTCCTTCAACATTGCAACATCTGATTTGTGTTCAAACCCAGTGGTTTTCATCAAGGTATGCTTATTCAACCTCTTCCAATGGGCATTCTTTCACCGTCTCATATCTCATTGACACCTGTGGCTTGTCACCCAAACAAGCTGCTTCAGCTTCTAAGCGTGTCAGCTTCGAAACGCCGGATAAGCCTGATTTGGTTATCAATTTCCTTAAAAGTCATGGATTCTCTCAGCCCCAGATTGTTCGTTTCATTGCTGAGATCCCATCGTTTCTCCGATATGATCCTGAGAAAACCTTTCTGCCCAAAATTGAATTTTTCAAATCCAGAGGCGTTTCGAGCTCAGACATCCCTAGGCTCATATGTAGTTGTCCTAGAATCATGTCAAGAAGCTTAAGGAAGCAGCTCATTCCTTCCTTTGACTTCTTTCGAGATGTGTCTCAATCTGACGAGAAGCTTATTAAAACTCTTCAATATTGCTCGGGCATTCTTCTTAACGCCAACACAATTGCCCGGCCTAATATGGAGCTATTGCGAGAAGCAGGAGTTCCTGAATCAAATGTCATCAAATTGTTGCAAGTGTATCCTAGGACATTAACTGCAAGCCCTAATGTGTTTAAGGACATTGTAGAAGAAGTGAAGAATATAGGGATCAATCCTTTGAAGTATCAATTTCTTATGGCTATTCATGTATTCTTCTGTCTAAACAAATCCTCATTGGCAAAGAGAGCTGATGTTTATAAAAAGTGGGGTTGGTCTGACCATGACACTCTTGTGGCATTTAGAAAGTTCCCTTTCTGTATGGCAGCAGCAGAGGATAAGATCGATGCAATAATGGAGTTTCTTGTCCATAAATTGGGCTGGGCAGGAAGCAACTCAATTATTAGAGTTGTATCAGTCTAA 939 0.4164 MLPSLRKAIGISAVSPSTLQHLICVQTQWFSSRYAYSTSSNGHSFTVSYLIDTCGLSPKQAASASKRVSFETPDKPDLVINFLKSHGFSQPQIVRFIAEIPSFLRYDPEKTFLPKIEFFKSRGVSSSDIPRLICSCPRIMSRSLRKQLIPSFDFFRDVSQSDEKLIKTLQYCSGILLNANTIARPNMELLREAGVPESNVIKLLQVYPRTLTASPNVFKDIVEEVKNIGINPLKYQFLMAIHVFFCLNKSSLAKRADVYKKWGWSDHDTLVAFRKFPFCMAAAEDKIDAIMEFLVHKLGWAGSNSIIRVVSV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4310g00004 312 Gene3D Transcription termination factor 3, mitochondrial 144 310 IPR038538 -
Pral4310g00004 312 PANTHER CGI-12 PROTEIN-RELATED 41 305 IPR003690 GO:0003690|GO:0006355
Pral4310g00004 312 SMART mt_12 166 196 IPR003690 GO:0003690|GO:0006355
Pral4310g00004 312 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Pral4310g00004 312 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Pral4310g00004 312 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Pral4310g00004 312 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Pral4310g00004 312 Pfam mTERF 80 310 IPR003690 GO:0003690|GO:0006355
Pral4310g00004 312 FunFam Mitochondrial transcription termination factor-like 144 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4310g00004 Pral-Chr4310 22144 23676 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4310g00004 mTERF 5.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4310g00004 K15031 - qsa:O6P43_003532 290.041