Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4310g00003 ATGTTTTGCTTTCTAAGGAAAATCATCCTTTTTCGGAGGCATATCATCAACACAATCTCTCCCTCAACATCTCAGCAATTACTTTGCTTTCAAAGCCAATGTCTACCTGCCACTGCCAGGTACTGTAATTCAATTTCATCCAGCGAGCATTCTTTCACAGTCTCATATCTCATTGACACATGTGGCTTCTCACCCAAAGAAGCTGCTGGAGTTTCCAAGTATCTCAGCTTGGAAACGCGAGAAAAACCAGATACGGTTATCAATTTCTTGAAGAATCTCGGATTCTCAAAATCCCAGATTCTTCGTGTCACAAGACGAGTCCCCCAATGTCTTCGATCTCACCCTGAGAAAACCATACTCCCCAAGATCGAGTTTTTCATATCCAGAGGCGTTTCGAGTTCAGACATCCCTAAGCTCTTATGTAGTTGTCCTAACATTATGAAAAGAAGCTTAAATAAGCAGCTCATTCCTTCCTTTGATTTCTTTCGAGATTTGTTTCAATCTGATGACAAGCTCATTAAAGCTCTTAAATCTTGCTCGGGCATTCTTATTGATATTAACACCCTTGCCGTGCCTAATATGAAGCTATTAAGAGAAGTCGGAGTTCCTGAATCAAACATAATCAAATTGTTGCAAATCTATCCTAAGACAGTGACTACAAGTACTGAAAAATTCAATATCATAGTGGAGCGAGTTCAGGAAATGGGGTTTGATCCTTTAAAGTTTCAATTTTGTATCGCCGTTTACGTATTGTCGTCGCTAAGCAAATCTACATGGTCAAAAAAGGCTAAGGTTTACAAGAAGTGGGGCTGGTCAGACAACGACATTCATGCTGCTTTCAGAAGTTTCCCATTTTGTATGAAGGCATCTGAGGATAAAATTGATGCAATAATGACGATTCTTGTTCAGAAATTGGGCTGTCCGCCTTCCACTATTCCCACTTATGCAGTAGTTCTGTCACTTAGTTTGAATAGACGAATTGTTCCACGGGCTTCTGTCATTCAAGTTTTGTTGTCAAAAGGTCTGGTGAAAAAGGAAAGATTGCTCTCAATATTTCTCTATACTGAAAGGGTGTTTTTGAGAAGATTGGTCATCAGTCATGAGGAAGAATGCAGTGAACTCCTGAAGCTTTATCAGGCTGAACTTGATCTTGCAAGGTGA 1161 0.3997 MFCFLRKIILFRRHIINTISPSTSQQLLCFQSQCLPATARYCNSISSSEHSFTVSYLIDTCGFSPKEAAGVSKYLSLETREKPDTVINFLKNLGFSKSQILRVTRRVPQCLRSHPEKTILPKIEFFISRGVSSSDIPKLLCSCPNIMKRSLNKQLIPSFDFFRDLFQSDDKLIKALKSCSGILIDINTLAVPNMKLLREVGVPESNIIKLLQIYPKTVTTSTEKFNIIVERVQEMGFDPLKFQFCIAVYVLSSLSKSTWSKKAKVYKKWGWSDNDIHAAFRSFPFCMKASEDKIDAIMTILVQKLGCPPSTIPTYAVVLSLSLNRRIVPRASVIQVLLSKGLVKKERLLSIFLYTERVFLRRLVISHEEECSELLKLYQAELDLAR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4310g00003 386 Pfam mTERF 87 295 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 Pfam mTERF 250 359 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 FunFam Mitochondrial transcription termination factor-like 151 371 - -
Pral4310g00003 386 Gene3D Transcription termination factor 3, mitochondrial 188 377 IPR038538 -
Pral4310g00003 386 Gene3D Transcription termination factor 3, mitochondrial 49 187 IPR038538 -
Pral4310g00003 386 PANTHER CGI-12 PROTEIN-RELATED 48 368 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 SMART mt_12 173 203 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 SMART mt_12 65 96 IPR003690 GO:0003690|GO:0006355
Pral4310g00003 386 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4310g00003 Pral-Chr4310 15782 17092 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4310g00003 mTERF 4.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4310g00003 K15031 - qsa:O6P43_003531 367.466