Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4309g00043 ATGCAGCAATATCAGCTCAAGAAGGATATTAAAGAATTGGGTTTCTTCACTGAGTATGGGGATGCCAATAGATACAAGCTTCTTGAAGTTATAGGGAAGGGCAGCTATGGAGTTGTTTGTGCGGCGATTGACACACACACTGGAGAAAAAGTAGCAATAAAGAAGATCCACGATGTTTTTGACCATGCATCTGATGCCATTAGAATTCTTCGTGAAGTTAAATTACTCAGGCTTTTAAGGCACCCTGATATCGTAGAAATTAAGCGGATAATGATGCCACCTTCAAAGAGAGATTTCAAAGATATTTATGTAGTCTTTGAGCTCATGGAATCTGATCTCCATCAAGTCATTAAAGCTAATGATGATTTGACCCGTGAACATCATCAGTTTTTTCTTTATCAGCTCCTACGTGCATTGAAATATATGCACACAGCAAATATGTATCACAGAGACCTCAAACCCAAGAACATACTGGCAAATGCAAATTGCAAACTCAAGATTTGTGATTTTGGACTGGCAAGAGTTGCATTCAATGATGCTCCTACAACAATATTTTGGACAGATTATGTTGCTACTAGGTGGTACAGGGCCCCAGAACTCTGTGGAGCATTCTCTTCTAAGTATACACCAGCAATTGATATATGGGGTATTGGTTGCATCTTTGCTGAGGTCCTCACCGGAAAGCCATTGTTTCCTGGTAAAAGTGTTGTACATCAATTGGATTTGATTACTGATCTCCTTGGGACCCCATCAGCAGATACGATTTCAGGAGTTCGAAATGAGAAGGCAAGAAAATACTTGATGGAAATGAGGAAAAAACGGCCTGTGCCTTTTGAGCAGAAATTTCCAAATGCAGATCCTTTGGCGCTGCGCCTTTTGCGAAGGCTTCTAGCATTTGATCCCAAAGATAGGCCAACTGCTGAAGAGGCACTAGCCGATCCTTATTTCAAGGGCTTGTCCAAAGTTGAGAGAGAACCTTCTTGTCAGTCAATTTCAAAGTTGGAATTTGAGTTTGAGAGGCGAAGGTTGACAAAGGAGGATATTAGAGAATTAATATATCGTGAAATACTGGAATATCACCCTCAGATGCTTAAAGATTACATAAATGGAACTGAAGGCAATTTTCTCTATCCTAGTGCAATAGGCCAATTCAGAAAGCAATTTGCTTATCTCGAGGAAAATGGTGGCTCAGTGACTCCTCCAGAAAGGAAGCATGCCTCCCTTCCGAGGCCTGCTATTTACTCGGGTACGGTCCCTCTTAATACAAAGCCAAATTTCAATTTGTACGAGAACAAACAAAATGCAGAACAAAATGCAGAAGAGGCATATAAGAGTTTCAGAGAAGCTGAATCAAATTCTGGAAGTCAATGGAGGGGTTCCCGGCCTCCGCCAAGAGCGCCAGCAGCTAAGCCCGGGAGAGTGGTAGGCCCAGTTGTACCCTACGAAAACGGGAGAATCACAAATACTTTTTATGATTCAAGGATCTTTTATCAAAATGCTCTTCCCCAAGCGGCTGGTTCTCCTCACTGCTTTTTCAGACCTCAACCGACAAACTCACAGAAGACTGTATCAGAGACACACCAGGTTTTTTCACAATGCAAGCGTCAAGTCCCATTCCAGCAGTGTCACCACCTAGCCAGGCCTGCAATTGACCTCAACTCCAACCCATACCAACAACAAACCACGATTGACCGGTTTGATAATCCCATGATTACAGTTGATACGAAGCTGCAGCAGGCACAATCTCACTTTGGTGCAGTTGGCTCTGCAGCTGTGGCCATCGGAGCTCATAGACATTCTGGTGCTGTTCAGTATGGATTGTCATAG 1827 0.4286 MQQYQLKKDIKELGFFTEYGDANRYKLLEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFDHASDAIRILREVKLLRLLRHPDIVEIKRIMMPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQLLRALKYMHTANMYHRDLKPKNILANANCKLKICDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGAFSSKYTPAIDIWGIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSADTISGVRNEKARKYLMEMRKKRPVPFEQKFPNADPLALRLLRRLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQSISKLEFEFERRRLTKEDIRELIYREILEYHPQMLKDYINGTEGNFLYPSAIGQFRKQFAYLEENGGSVTPPERKHASLPRPAIYSGTVPLNTKPNFNLYENKQNAEQNAEEAYKSFREAESNSGSQWRGSRPPPRAPAAKPGRVVGPVVPYENGRITNTFYDSRIFYQNALPQAAGSPHCFFRPQPTNSQKTVSETHQVFSQCKRQVPFQQCHHLARPAIDLNSNPYQQQTTIDRFDNPMITVDTKLQQAQSHFGAVGSAAVAIGAHRHSGAVQYGLS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4309g00043 608 FunFam Mitogen-activated protein kinase 111 339 - -
Pral4309g00043 608 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 367 - -
Pral4309g00043 608 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral4309g00043 608 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4309g00043 608 FunFam Mitogen-activated protein kinase 15 119 - -
Pral4309g00043 608 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pral4309g00043 608 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Pral4309g00043 608 MobiDBLite consensus disorder prediction 437 472 - -
Pral4309g00043 608 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pral4309g00043 608 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4309g00043 608 CDD STKc_TDY_MAPK 24 361 - -
Pral4309g00043 608 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4309g00043 608 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Pral4309g00043 608 Coils Coil 429 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4309g00043 Pral-Chr4309 531032 538135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4309g00043 1 606 MAP Kinase Gene Family AT1G53510 67.095 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral4309g00043 Pkinase 7.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4309g00043 - - gmx:100800878 929.472