Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4309g00040 ATGAGCAAGTCTTTGCTTTTAGGCTTTTACATCACGGTATCCTGCCTCGCTTTTGTCATATCCAAGATCATTATCTCAGTCCTCCTCTACAAAAGATGGAAAAGAAAGCACATGATTCATGAAGAAGGCTATGCAGGTGGGAAGATAGTAATCTTTAGGTCTTCAGTTCTGCAGTCTCTTGAATCTGATACGATCTTGAAGAAGATGATGAACCTAAATAATATGGAGGTCATTGGATGTGGTGGTTATGGGACGGTTTATAAACTGAAAATAGATGACTCAAAAGCTTTTGCAGTGAAAAGACTGAACAGAGGAACTGCAGATAAAGGATTTGAGAGAGAGCTGGAAGCAATGGCAGACATAAAACACCGCAATATTGTAACTCTTCATGGATATTATACTGCTCCATATTACAACCTCCTCATATACGAGTTGATGCCAAACGGAAGTTTGGATAATTTCCTCTACGGAGCACCAGAGAAGAGGAAAACTTTGGACTGGTCATCAAGATACAGAATAGCTATAGGAGCTGCTAGAGGAATATCTTATCTTCACCATGATTGCATCCCTCACATAATCCACAGAGATATCAAGTCAAGCAATATATTGTTGGACGAAAACATGGAGGCTCGAGTTTCTGATTTTGGATTAGCCACGTTGATGGAACCTGACAAAACCCATGTTTCCACAATTGTGGCTGGAACTTTTGGATACTTGGCTCCTGAATACTTCGATACAGGAAGAGCAACGTTCAAGGGGGATGTCTACAGCTATGGAGTTGTACTACTGGAGCTTTTAACAGGGAGAAAACCCAGTGATGAAACATTTATGGAAGAAGGAACGAAGCTCGTCACATGGGTGAAGGCTGTTGTTCAAGAAAAGAAGGAGGAACTAGTTCTCGATGATAGGCTAGGGACGTGTCCAATGCAAGAAGTTAACAATTTGTTCAATATTGCCATGATGTGTCTTGAATCCGATCCCTTGAAGAGGCCAACAATGGAAGAAGTTGTCAGCTTGCTTGAGCAAACGAAGGCGGACAAACTTGCTACAGCTTACTGA 1059 0.4145 MSKSLLLGFYITVSCLAFVISKIIISVLLYKRWKRKHMIHEEGYAGGKIVIFRSSVLQSLESDTILKKMMNLNNMEVIGCGGYGTVYKLKIDDSKAFAVKRLNRGTADKGFERELEAMADIKHRNIVTLHGYYTAPYYNLLIYELMPNGSLDNFLYGAPEKRKTLDWSSRYRIAIGAARGISYLHHDCIPHIIHRDIKSSNILLDENMEARVSDFGLATLMEPDKTHVSTIVAGTFGYLAPEYFDTGRATFKGDVYSYGVVLLELLTGRKPSDETFMEEGTKLVTWVKAVVQEKKEELVLDDRLGTCPMQEVNNLFNIAMMCLESDPLKRPTMEEVVSLLEQTKADKLATAY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4309g00040 352 Pfam Protein kinase domain 74 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4309g00040 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Pral4309g00040 352 SUPERFAMILY Protein kinase-like (PK-like) 63 342 IPR011009 -
Pral4309g00040 352 Gene3D Transferase(Phosphotransferase) domain 1 146 351 - -
Pral4309g00040 352 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Pral4309g00040 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Pral4309g00040 352 SMART serkin_6 72 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4309g00040 352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 11 344 - -
Pral4309g00040 352 Gene3D Phosphorylase Kinase; domain 1 50 145 - -
Pral4309g00040 352 ProSiteProfiles Protein kinase domain profile. 72 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4309g00040 352 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 146 351 - -
Pral4309g00040 352 FunFam Receptor-like serine/threonine-protein kinase 43 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4309g00040 Pral-Chr4309 489939 492770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4309g00040 3 342 Receptor kinase-like Gene Family AT2G35620 48.266 4.03e-104 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pral4309g00040 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4309g00040 - - qsa:O6P43_001114 557.755