Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4309g00007 ATGTCAAGCAGCTCACAAGTTATAACTTGCAAAGGAGCAATATGTTGGGGAAAAGGAGAGGGAGTGAAAGTGGAAGAGATACAAGTAGACCCTCCGAAAGCTTCTGAAGTCCGAGTTAAAATGCTTTATGCCAGTTTGTGCCACACAGACATCTTGAGAAGTCGAGGATGGCCATATCCAGTTTTCCCTCAAGCACTGGGGCATGAAGGCGTAGGGGTTGTGGAGAGCATAGGGGAGAAAGTGACAGATCTCAAAGTTGGAGATATAGTGATTCCAATATATGTTGGAGAGTGTGGAGAATGTGAGGTCTGTGTTTCAGGGAAATCAAACTTATGCGTGAGATATCCTCTAAGAGTGAGTGGCCTTATGCCTGATGATACATCAAGGATTTCCATAAGAGGACAGAAAGTGTACCATGTGTTTAGCTGCTCAACATGGTGTGAGTATATGGTCAGTGATGAGAGCTACCTTATGAAAGTTGATCCAAGTATTGATTTGGCTCATGCTAGCTTCATCTCTTGTGGATTCTCTACTGGTTTTGGGGCTGCTTGGCAGACAGCCCAAGTTCAAAGTGGATCATCTGTGGTTGTTTTCGGCCTTGGAGCTGTTGGGTTAGGGGCGATAAGTGGAGCCAAGATGATGGGAGCAACTAAGATAATAGGTGTTGACATCAATGAGAAGAAGAGAGAAAAGGGGAAAGCTTTTGGAATGACAGATTTTATAAATCCTAAGGATCACTCTGATAAGCCTTCTTCTCAGTTGGTGAAGGATCTTACTGGCGGATTAGGTGTGGATTATGCCATTGAGTGCACTGGTGTTGCCCCTCTGCTCACTCAAGCCCTGGAATCCACAAAAGTGGGGGGAGGAAAGGCAATAGTAATCGGTGCAGGAAGCGAGGAATTTGTGCAGGTGAACTGGTTAGGTCTTCTTCTTGGAAGAACTTTAAAGGGTTCTGTTTTTGGAGGCTTAAAACCAAAATCGGACCTTCCTGTTTTAGCTGCCAAGTGCCTAAACAAGGATATCTCTCTTGATGAACTTCAGACCCATGAAATCCCTTTAACAGAGATAAGCAAAGCATTTGAGATATCGAAACAGCCAGAATGTGTCAAAGTTATCATCAAGATATGA 1128 0.4397 MSSSSQVITCKGAICWGKGEGVKVEEIQVDPPKASEVRVKMLYASLCHTDILRSRGWPYPVFPQALGHEGVGVVESIGEKVTDLKVGDIVIPIYVGECGECEVCVSGKSNLCVRYPLRVSGLMPDDTSRISIRGQKVYHVFSCSTWCEYMVSDESYLMKVDPSIDLAHASFISCGFSTGFGAAWQTAQVQSGSSVVVFGLGAVGLGAISGAKMMGATKIIGVDINEKKREKGKAFGMTDFINPKDHSDKPSSQLVKDLTGGLGVDYAIECTGVAPLLTQALESTKVGGGKAIVIGAGSEEFVQVNWLGLLLGRTLKGSVFGGLKPKSDLPVLAAKCLNKDISLDELQTHEIPLTEISKAFEISKQPECVKVIIKI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4309g00007 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Pral4309g00007 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 318 - -
Pral4309g00007 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 337 IPR036291 -
Pral4309g00007 375 Gene3D - 179 318 - -
Pral4309g00007 375 Gene3D - 14 370 - -
Pral4309g00007 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Pral4309g00007 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Pral4309g00007 375 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Pral4309g00007 375 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Pral4309g00007 375 CDD liver_alcohol_DH_like 8 374 - -
Pral4309g00007 375 SUPERFAMILY GroES-like 4 188 IPR011032 -
Pral4309g00007 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4309g00007 Pral-Chr4309 206517 209575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4309g00007 36 343 Monolignol Biosynthesis Gene Families AT4G37990 27.070 6.98e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4309g00007 K00121 - qsu:112016171 514.227