Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4303g00003 ATGGCCGGCCTGGACTTGGGTTCTTCACAATCTCATCACTTTCTCCTTCATCATCAGCTTCAACGCCCTAATCTTCAATCCAACCAAGATGACGATGATAACCAAGAAGATAGTCCGAACCCTCAAGGGCTTAACCCGGCCGGTTCAGGTGATGTTGTCCGCCGGCCCAGGGGTAGGCCGCCAGGATCGAAGAATAAGCCGAAGCCGCCGGTGATAATCACGCGCGAGAGTGCCAACGCGCTTCGAGCTCATATTCTTGAGGTTAGCGGCGGCTCCGATGTGTTTGAGTGTGTGGCGACTTATGCAAGGAGGAGACAGCGAGGGATCTGTGTGTTGAGTGGGAGCGGCACGGTCACCAACGTGACAATCCGCCAGCCATCACCAGCCGGAGCCGTCGCGACCCTGCAGGGCAGGTTTGAGATACTGTCTCTGTCCGGATCTTTCTTGCCGCCTCCAGCTCCGCCAGGAGCAACAAGCCTGAGCGTATTTCTCGCCGGAGGACAAGGTCATGTGGTCGGAGGAAATGTTGTCGGTGCGTTGGTGGCGGCTGGTCCAATTATTGTGATTGCTTCTTCATTTACCAACGTAGCATATGAGAGATTGCCATTAGATAACGAGGAGGAACCCTTACCGGTCCAGAACGGCAGCGGCGCTGACAACAGCGGTGGCGGGGACCGAGACATGAATGGATTTCCGAGCTCATCTTCTGGTCTTCCCTTCTTGAATTTGCCTGTAAACATGTCTCAGTTACCTCTTAACGGTAACTGGGTTGAAAATTCTGGCGGTGGAAGATCTCAGCAGCCATATTAA 810 0.5407 MAGLDLGSSQSHHFLLHHQLQRPNLQSNQDDDDNQEDSPNPQGLNPAGSGDVVRRPRGRPPGSKNKPKPPVIITRESANALRAHILEVSGGSDVFECVATYARRRQRGICVLSGSGTVTNVTIRQPSPAGAVATLQGRFEILSLSGSFLPPPAPPGATSLSVFLAGGQGHVVGGNVVGALVAAGPIIVIASSFTNVAYERLPLDNEEEPLPVQNGSGADNSGGGDRDMNGFPSSSSGLPFLNLPVNMSQLPLNGNWVENSGGGRSQQPY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4303g00003 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 195 IPR005175 -
Pral4303g00003 269 MobiDBLite consensus disorder prediction 22 72 - -
Pral4303g00003 269 FunFam AT-hook motif nuclear-localized protein 81 208 - -
Pral4303g00003 269 PIRSF ESCAROLA 3 268 IPR014476 GO:0003680
Pral4303g00003 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 221 IPR014476 GO:0003680
Pral4303g00003 269 ProSiteProfiles PPC domain profile profile. 78 216 IPR005175 -
Pral4303g00003 269 Gene3D - 81 212 - -
Pral4303g00003 269 MobiDBLite consensus disorder prediction 205 235 - -
Pral4303g00003 269 CDD DUF296 82 165 IPR005175 -
Pral4303g00003 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4303g00003 Pral-Chr4303 96416 97997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4303g00003 52 265 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 67.580 3.15e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4303g00003 - - gmx:100814613 301.982