Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral42g00007 ATGGATGAGGTGGGAATATCAATAGCAGCAAAACTTGCTGAATATTTGGTGGATCCTACTTTACGCCAATTGCAATATTTGTTTTGCGTCGGAAAAATCACCAGAAATGTTGAGACCAAAAAGGAGGAATTGGTGCTGAGGCAGGGGAGGGTGCAGGAACGTGTTGAAGAAGCCATTAAGAGGACTGAGAGGATCGATGATGAGGTTAACAAGTGGAAGAATGAGGTGGTGAGGCTCATAGCAGATGTGGAGAACTTGGTGCAAGAACTTAATGCCAACAATGGCTGCTTCCAAAGGTGGTGTCCTACTGGGAGGAGATATCATCTCTGCAAAGTGTTGGCAAAGGCAACCCAGCGGATGGCAGAGCTAAATACAAAGAGTGATCAGTTCGAACCATTTTCGCATCATGTTATTGTTCCAGATATAGAGTATCACTCTTCTAAAGATTTTATGTTCTTCAAGTCAACAGAAATGGCATATGATCAACTATGGGAGGCACTGCAAGATGATGATAGCTCTATAATTGGGTTGTGGGGTATGGGCGGTTCGGGCAAAACCACATTGATAAAGGAAGTAGGAAAGAAAGCCAAAGAATTAGGGCTATTTGATCGAGTTATAATCACAACAGTTTCCCAAACTCCAAATATTAGGAAGATTCAGGGTGAACTTGCAGACCTGATGGGACTTGAGTTGAAGGAAGAAACTGAAGTGGGAAGGGCGAGAAGAATTGCAATGAAATTACAAAGTCCAGAGGAGCGAATTCTGATTATATTGGATGATGTATGGGCTATGTTGAACCTTGAGGATATAGGGAAACCCTTTGGGGATGAAGGTCCCAGAAATTGCAAAGTCCTTCTTACCACACGTCGTCAAGATGTATGTAGTTTGATGGATTGCCAAAAAACTATTCCATTGGGTTTGCTAACAGAACATGAAGCCTGGGATCTATTTCAAACTCATGCTAAAGTAGATGATGGTGCTAGAAAAGTGGCCCAGGAAGTTGTTACGGAATGTAAGGGACTACCCATTGCAATTGTGGCCATGGGGAAGTGCTTAAGAAGAAAAGGACTTGATGAGGTGAATGTAGTATTGCATAGGTTAAGACATTCGAAGCCAGTTGACGTGGATAAGGGAGGGAGTGATGCTTTTACTTGTCTGAAGTTAAGCTATGATTATTTGGGAACTGTAGAAGCCAAATCGTTGTTCTTGATCTGTGCTATGTTTCCCGAAGATCATGAAATTATCATTGAAGATCTTTTTAGATATGGAGTTGGGTTGGGCCTATGCGAAGATGCTGACTCATTTGAAATAGCAAGGAGCCAAGTTATAGCAGCCATAAATGTTCTCATTGATTCTTCGTTGTTGATGTATTTTGTCAACTTCAAGAGTGAAAAATCTGTGAAAATGCATGACATGGTTCGCGATGTAGCTTTGTGGATAGCACCTAGAGAGCATGGTACAATTATGGTAAACTCTGCTAAAGAATTGAATGAATTGCTTGAAGATGAAGCAGTAAAAGATTGCTATGCAGTATCTTCATGGAAGAAAAAAACTGAATTGGTTAAATTTCCTTCCCAATTGGACGCTCCAAAGCTTGAGCTTCTGTGTTAA 1611 0.4115 MDEVGISIAAKLAEYLVDPTLRQLQYLFCVGKITRNVETKKEELVLRQGRVQERVEEAIKRTERIDDEVNKWKNEVVRLIADVENLVQELNANNGCFQRWCPTGRRYHLCKVLAKATQRMAELNTKSDQFEPFSHHVIVPDIEYHSSKDFMFFKSTEMAYDQLWEALQDDDSSIIGLWGMGGSGKTTLIKEVGKKAKELGLFDRVIITTVSQTPNIRKIQGELADLMGLELKEETEVGRARRIAMKLQSPEERILIILDDVWAMLNLEDIGKPFGDEGPRNCKVLLTTRRQDVCSLMDCQKTIPLGLLTEHEAWDLFQTHAKVDDGARKVAQEVVTECKGLPIAIVAMGKCLRRKGLDEVNVVLHRLRHSKPVDVDKGGSDAFTCLKLSYDYLGTVEAKSLFLICAMFPEDHEIIIEDLFRYGVGLGLCEDADSFEIARSQVIAAINVLIDSSLLMYFVNFKSEKSVKMHDMVRDVALWIAPREHGTIMVNSAKELNELLEDEAVKDCYAVSSWKKKTELVKFPSQLDAPKLELLC 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral42g00007 536 Gene3D - 307 389 IPR042197 -
Pral42g00007 536 PRINTS Disease resistance protein signature 248 262 - -
Pral42g00007 536 PRINTS Disease resistance protein signature 338 352 - -
Pral42g00007 536 PRINTS Disease resistance protein signature 174 189 - -
Pral42g00007 536 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 531 - -
Pral42g00007 536 Pfam NB-ARC domain 159 390 IPR002182 GO:0043531
Pral42g00007 536 Coils Coil 55 93 - -
Pral42g00007 536 Gene3D - 390 478 IPR036388 -
Pral42g00007 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 405 IPR027417 -
Pral42g00007 536 SMART AAA_5 171 327 IPR003593 GO:0016887
Pral42g00007 536 Gene3D - 145 303 IPR027417 -
Pral42g00007 536 FunFam Probable disease resistance protein At1g61300 145 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral42g00007 Pral-Chr42 70294 71904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral42g00007 168 484 WRKY Transcription Factor Family AT5G45050 26.687 1.19e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral42g00007 - - pcin:129301500 764.992