Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral42g00005 ATGGATGAAGTGGGTATATCAATAGCAGCAAAACTTGCTGAATATTTGGTGGATCCTACTTTGCGCCAATTGCAATATTTGTTTTGTGGCGGAAAAATCACCAGAAATGTTGAGACCAAAAAGGAGGAATTGATACTGAAGCAAGGGAGGGTGCAAGAACGTGTTGAAGAAGCCATTAAGAGGACTGAGAGAATCGATGATGAGGTTAACAAGTGGAAGAATGAGGTGGTGAGGCTCATAGCAGATGTGGAGAACTTGGTGCAAGAACTTAAGGCCAACAATGGCTGCTTTCAAAGGTGGTGTCTTATTGGGAGGAGATATCATCTCTGCAAAGCGTTGGCAAAGACAGCCCAGCAGATGACAGAGCTAAATACAAAGAGTGATCAATTCGAACCATTTTCCCATCATGTTGTTGTTCCAGATATAGAGTATCACTCTTCTAAAGATTTTATGTTTTTCAAGTCAACAGAAATGGCACATGATCAACTATGGGAGGCACTGCAAGATGATGATAGCTCTATAATTGGGTTGTGGGGTATGGGCGGTTCGGGCAAAACCACATTGATAAAGGAAGTAGGAAAGAAAGCCAAAGAATCAGGGCTATTTGATCGAGTTATAATCACAACAGTTTCCCAAACTCCAAATATTAGGAAGATTCAGGGTGAACTTGCAGACTTGATGGGACTTGAGTTGAAGGAAGAAACTGAAGTGGGAAGGGCGAGAAGAATTGCAATGAAATTACAAAGTCGAGACGAGCGAATTCTGATTATATTGGATGATGTATGGGCTACATTGAACCTTGAGGATATTGGGAATCCCTTTGGGGATGACGGTCCAGGAAATTGCAAAGTTGTCCTGATCACACGTCGTCAAGAGGTATGTACTTTGATGGATTGCCAAAAAATTATTCCATTAGGTCTGCTAACAGAAGATGAAGCTTGGGATCTATTTCAAACTCATGCTAAAGTAGATGGTAGTGCTAGAGAAGTGGCTAAAGCAGTTGCTGTGGAATGTAAAGGACTACCCATTGCAATTGTGGCCATGGCAAAGTGCTTAAAAGGAAAAGGACTTGATGAGGCAAATGTAGTATTGCACAGGTTGAGACATTCAAAGCCAGTTGATGTGGATAAGGGAGGGAGTGATGCTTTTACTTGTCTCAAGTTAAGCTATGATTATTTGAGAACTGTAGAAGCCAAATTGTTGTTCTTGATGTGTGCCATGTTTCCTGAAGATCATGAAATTATCATTGAAGATCTTTTTAGATATGGAGTTGGGTTGGGCCTATGTGAAGATGCTGACTCATTTGAAATAGCAAGGAGTCAAGTTATAACAGCTATAAATGTTCTTATTGACTCTTCATTATTGATGTTTTTTGTCAACTTCAAGAATGGAAAATGTGTGAAAATGCATGACATGGTTCGTGATGTAGCTTTATGGATAGCATCTAAAGAGCATGGCACCATTATGGTAAATTGTGCAAGACAATTTAATGAATTTCTTGAAGATGAAGTAGTAAAAGATTGCTATGCAGTATCTTCATGGAATGAAAATACTAAGTTGCTTCAATTCCCTTCTCAATTCGACGCTCCAAAGCTTGAGGTTCTATTGTTAAATTCAAGCGACCCCCTAGATTTAACACTTGCATCATTTGAAGGTGTTAAAGGATTAAAAGTTGTAGCTGTAATTAACAATGGATATGGCTGTCAGACAAAATTAGTACCTCAGTCAATACAATGGTTGTCCAATCTTCGGACTTTGCGCTTGCAAGGTTGGCATTTAGGTGATATTTCTTTTGTGGTGAGCCTTAAAAGACTTGAGATTCTTGACTTGAAAGGCAGCAAGTTAAAAACAGTGCCAAATGGAATTGAGAAACTAAATTTTATGAAATTGCTCGATTTGTCACAGTGTACGGTAGAAGAGTGTTTTTGTAAAGTAATAGGAAGGTGTTTGCAGCTAGAAGAATTGTATGTTTCTAGAGATTTACAGCCTTCAGGATACACAATTTGTTATGCATGCTTTGTGGGTGTCCCTACTTATCCAAAACTGAGAAGGTATTCATTAGAAATGGGGCAATACGGTAGACCTGTGTTCTGGAATAAAGGCTTAAGAGAGTTACTCTTGGGAGAGTTAAATATCTCCATTTCAAGTGCAATAATCAAGGATCTTGCACAAAGAGCAACCACAATTGAATTTTATAAGCTTCAAGGAGGCTGCAAAAGTTTCAGTCCAGATGTGGTTCAAGCAGTAGGAGGCTTGAATGAGTTAACCAAACTCTGTCTTCGACGCTGTTCTGAGATTGAATGCTTTACTGATCAAACTATTCCTCATGAAGACATACTTGTCCTTAGATTGGTTGAGTTGGTGTTGGAGTATATGGATAATCTAAAACAACTATGTCACAGTCCTTCTAATCTTACCTTATTCCTAAATCTAGAAAGTCTATATGTAGAAAGTTGCCGTCAATTGGTCAACATGTTTCCTGCTAATTGCAACTTAGGCAACCTTAAGTTCCTCAACATTGTCAACTGTCCGATGTTGACATCTCTCTTCTCCATCTCTGTTGCTTGCACTCTGTTATGTCTAGAAAAACTCACAATAAAGGGATGTCATGAATTGAAGCACATAATTGAGGGGGAGGATGGTGCTGATATATGGGAGGATCCGAGATTCTCAAAATGGGAAATTCTATCTAGATGCTCCTCAGTTGAAATTTGTGTTTGGCAAAAATGGTGA 2733 0.3904 MDEVGISIAAKLAEYLVDPTLRQLQYLFCGGKITRNVETKKEELILKQGRVQERVEEAIKRTERIDDEVNKWKNEVVRLIADVENLVQELKANNGCFQRWCLIGRRYHLCKALAKTAQQMTELNTKSDQFEPFSHHVVVPDIEYHSSKDFMFFKSTEMAHDQLWEALQDDDSSIIGLWGMGGSGKTTLIKEVGKKAKESGLFDRVIITTVSQTPNIRKIQGELADLMGLELKEETEVGRARRIAMKLQSRDERILIILDDVWATLNLEDIGNPFGDDGPGNCKVVLITRRQEVCTLMDCQKIIPLGLLTEDEAWDLFQTHAKVDGSAREVAKAVAVECKGLPIAIVAMAKCLKGKGLDEANVVLHRLRHSKPVDVDKGGSDAFTCLKLSYDYLRTVEAKLLFLMCAMFPEDHEIIIEDLFRYGVGLGLCEDADSFEIARSQVITAINVLIDSSLLMFFVNFKNGKCVKMHDMVRDVALWIASKEHGTIMVNCARQFNEFLEDEVVKDCYAVSSWNENTKLLQFPSQFDAPKLEVLLLNSSDPLDLTLASFEGVKGLKVVAVINNGYGCQTKLVPQSIQWLSNLRTLRLQGWHLGDISFVVSLKRLEILDLKGSKLKTVPNGIEKLNFMKLLDLSQCTVEECFCKVIGRCLQLEELYVSRDLQPSGYTICYACFVGVPTYPKLRRYSLEMGQYGRPVFWNKGLRELLLGELNISISSAIIKDLAQRATTIEFYKLQGGCKSFSPDVVQAVGGLNELTKLCLRRCSEIECFTDQTIPHEDILVLRLVELVLEYMDNLKQLCHSPSNLTLFLNLESLYVESCRQLVNMFPANCNLGNLKFLNIVNCPMLTSLFSISVACTLLCLEKLTIKGCHELKHIIEGEDGADIWEDPRFSKWEILSRCSSVEICVWQKW 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral42g00005 910 Pfam NB-ARC domain 159 377 IPR002182 GO:0043531
Pral42g00005 910 SUPERFAMILY L domain-like 468 877 - -
Pral42g00005 910 Gene3D Ribonuclease Inhibitor 489 669 IPR032675 -
Pral42g00005 910 Gene3D - 143 303 IPR027417 -
Pral42g00005 910 Gene3D Ribonuclease Inhibitor 702 880 IPR032675 -
Pral42g00005 910 SMART AAA_5 171 307 IPR003593 GO:0016887
Pral42g00005 910 Gene3D - 307 389 IPR042197 -
Pral42g00005 910 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 30 890 - -
Pral42g00005 910 Coils Coil 55 93 - -
Pral42g00005 910 FunFam Probable disease resistance protein At1g61300 145 301 - -
Pral42g00005 910 PRINTS Disease resistance protein signature 338 352 - -
Pral42g00005 910 PRINTS Disease resistance protein signature 600 616 - -
Pral42g00005 910 PRINTS Disease resistance protein signature 174 189 - -
Pral42g00005 910 PRINTS Disease resistance protein signature 248 262 - -
Pral42g00005 910 Gene3D - 390 478 IPR036388 -
Pral42g00005 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 405 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral42g00005 Pral-Chr42 36342 39157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral42g00005 171 645 WRKY Transcription Factor Family AT5G45050 23.191 3.32e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral42g00005 - - pcin:129301500 1192.18