Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral42g00004 ATGGCGGAGGTGGGACTGTCGGTAGCAGCAAAACTCGCTGAATATTTGGTGCACCCAACTTTCCAGCAGTTGCAATGTTTGGTTTGTGTCAGAAAAATCACCAGAAATGTTGACATTAGGAAGGAGGAGCTAATACTAAAGCAAGGGAGAGTGCAGGAACTTGTTCAAGAGGCTATCAAGAGAACTGAGAGGATTGATGATGAGGTTAACAAGTGGAAGAATGATGTGAAAAGCCTCATAGCAGAGGTGGAGAAATTAGAGGAAGGACTAAAGGCTAACCATGGCTGCCTTCGAGGGTGGTGCCCTACTTGGAAGAGATATTGTCTCTGCAAAAAGTTGGCTAAGACTGCCCAAAGGATGATTGATCTAAATACAAAGAGTGACTGCTTCAGTTCATTTTCCCATCCTGTTATTATTCCAGATATAGATTATCACTCTCCTCAAAACTTTAAGCTCTTCAACTCTACACAAAATGCTTTTGATCAGCTGTGTGAGGCACTGCGAGATGATGGTAGCTCCATAATTGGGCTATGGGGCATGGGAGGGTCAGGGAAAACCACCCTGGTGAAAGAAGTGGGAAAGAAAGCCAAAGAGTTACAGATCTTTGATCGAGTTGTGCTTACTACAATTTCTCAAAGCCCAAATGTAAGAAAAATTCAAGGCGAAATTGCTGACACGTTGGGGCTCAAATTAAGTGAAGAATTTGAAATAGGTAGAGCAAAAAGAATAGCACTAAGATTGCAAAGTGGAGAACGAATTTTGATAATACTGGATGATGTATGGGCCATGTTGGATCTTGAGGATATAGGGATTCTCACTGGAGGAAATCATCAAAGAAGTTGCAAAGTTGTCCTGACCACACGTCGTCTAGAGGTATGTAACTTGATGGAATGCCAAAAGATGATTCAACTTCATTTGTTAAAAGAAGATGAAGCTTGGACTTTGTTTCAAACTCATGCTAGGGTTGATGATGTCGCTAAAGAAGTTGTGGCTCATGAAATTGCCATGGAATGTAAGGGCCTACCTATAGCCATTGTAGCTATGGGAACTTGCTTGAGAGGAAAAGGAGTTGATGAGATGAATGTAGCGTTGTGTAGGTTGAGGAATGCAAAGCCAAACAATGTGGATAAAGGTGTTAGGAACGCTTTTGCTTGTCTTGAATTAAGCTATGATTATTTAGCGACCCCAAAAGCTAAGTTGTTGTTGTTAATGTGTGCCATGTTTCCTGAAGATCATGGCATTGTTGTTGAAGATCTCTTGAGGAATGGAGTGGGGTTAGGCTTATGCAAAGATGCGGACTCGTTTGAAACAGCAAGGAGTCAAGTTAGAGCAACTATAAATTATCTCATTGACTCCTCATTCTTGATGCGTTTTTGGAAGTTCAACATGTATACACAAGAATATGTGACAATGCATGATGTGGTTCGTGACTTTGCTTTGTGGAAAGCATCTGAAGAGGATCGCACCATTATGGTGAATTGTACAAAAGAATTAAACAAATTGATTACTGATGAAGCGATAAAAGATTGTTATGCCGTATCTTCATGGTATCACAACAATGAATTATTTCAATTTCCTTCTCATTTAGATGCTCCGAAGCTTGAGTTTCTATTATTACGCTCAATAAAACCCTTGGATATATCACATACATCATTTGAAGGCACCAAAGGACTCAAGGCTTTGATTATTATGTGCAAATATGAGGCTAGCGTTGAACTACAACCTCAATCAATCCAATGGTTGTCTAATCTTCAAACTTTGAGATTGCAGTATTGGGATTTACATGACATCTCTTTTGTGTTAAGTCTTACAAGACTTGAAATTCTTGACCTGCAAGGTAGTAAATTTGAAAGAATGCCAAATGGAATTGAAAAATTAAACAAGTTAAAGTTGTTAGATTTGTCGAGTTGCACAATAGATGAATGTTGTTATGAAGCAATAGGAAGGTGTTTGGAGTTAGAAGAGTTGTATGTTTCCAAACATTTTCCCCACTCAAAAAATGCAAATTGCTATCAATACCTTGCGGACCCTGCTGCTTTGATGAAATTGAGGAGGTATAAGTTAGAAATTGGGGAGCATGGCATAGGCTTCGCATCTCAAAATGAAGAAGACGCAAGATCTTTGCACTTGGGTCAATTAAATATCTCAATTTTAGGTGCAAGAATCAAAGACCTTGCACAAAGAGCAACTGTTATTAAATTTTATGAGCTTAAGAGAGGCAGCAAAATATTCATGCCTGATATTGCCCAAGTTGTAGGAGGCACAAATGAGCTAACTAAACTCCATCTTGAAAGGTGTTCAGAGATAGAATGCATTACCAATGAAACTACTCTTCATGAAGATGCAGTTGTCCCCAGATTGGATGAGTTAGTGCTAAGAGACATGGATAATCTTAAACAACTACATCGTGGGCCTTCTCCTTTCAGCTTGTTCCAAAAGTTGAAAAGGCTAAGTATATTCAATTGCCCTCAATTGCTCTACATATACCCTGCTGATTGCAACTTAGGCAATCTCAAGTTTCTCAATATTTCCAGTTGTCCAATGTTGACATCTCTCTTCCCTGTCTCTACCGCATGCACTTTGTTATCCTTAGAGAACCTTCAAATAGAAGGTTGCAGTGAATTGATGCATGTACTAGAGGGAGAGGGTGGTGGTGATGCATGGGAGAATTCAAGAGTCCCAGAACTAAAATATTTGTCCATCGATAATTGCTGCAAATTAGAATCTGTATGCCCGGTCTTTTTAGCTCAACGGTTTGTGCAATTGCAAGATCTATCCATAATGAATGCTCCTCAAATGAAATTTGTGTTTGGTGAAAATGCTGGTGAAGAACAACCAATTATGCATGATCAAGATGTGACTCAAATAGTGCTTCCCCTATTGAAATATATCAAACTGAAAAATCTTCCAAATATTGTTGGAATTTGCTCAAAGAGGTATCGTTCCAGGTACCCATCAATAAAGAGAATAGAATGGACGGATTGTCCAAATATGGGATTGCAGGAACTTAAGTGCCATGAATTGGCAGCTATGGAATGGATTGAACTAGATAATTATGGAGTAGAGTCCATTTTCCACCGTCAAACCGGGGTACAAGAGCAAATTCCAACACTTCAGTACCTCCGAAATTTAACTTTGAAGAAATGTGCAAGATTGAAATTTGTCTTTTCTGATCATATCTATCAAAGTCTTCCAGAGTTAACATCTGCAACCATATCTTGCTGTGAGGAGTTAGATGCAATTTTTGCAGGAAATGAAGAGACTCAGAAGAATCTATCCATTACTCAATCTTGTCTGCTGAAATTGAAGAGTTTGAAAGTCTCCAAGTGCAACAAACTGAAATTCATTTTATCTTTCATGATCAGTGCTTCTATTACTTCAGTGCTTCCGCAGCTAAGCAATCTAACCATATCCTATTGTTCGCAAATGGAAGAAATTTTCAACTGCTCAAACAATGAAGAGCATGAGATTGACAGTGACAAGGAGATTACATTCCCTAACATGAGAGATATGGAACTTAAGAACTTGCCTAGACTCGCTAATGTATGCCAAGGGTTTAAGTTGCTGACAGGGGAGCTTTGCAGAGTTCAAGTTCATGATTGCCCAAGACTTATGCCAATTATGGGTGCAACTATTGATTACACGAAAGAGGTTATGTGGCAATCAATGATGGTTCAAACCATGGAACTTGAAGAGAAGAAGGATTTCAGCAATGCAGAGCATTATATATTTCTGGCTCTCAATAATCTTCCACTTTCTGTTTTAAATGCTGGAGAGCTTGATGTTCAAAGTCCTAGAATTGCACGCTGGCGCATTATTGGTGATGATGAGCAAGAAGAAACAAGCGACTCAGAAGAACAACAAATGCCAGGAGGTCTTGTTCCCACACAAGTTTTGAGCTTCCAACATGTTCATTCCTTAAAAGTAACTCGCTGTGAAAAGTTAAAGTTTGTATTCTCAATGAGCACTATTGTCCACAACAGCCTTCCCAGATTAACTTCCCTAACCTTATTTGATTGTGAGAAATTGGAGGAAATAATTGCAGAAAATGAGGAACATAAGATCATGTCCAATGGTCAAGTTTGCTTCCCAGAACTAAAAGAGTTGAGGGTCGGGAGGTGCAACAAGCTCAAAAGACTCTTCTCTACGTCCGCGGCTATTATTCTTCCCCAACTAAACTTTTTGTGGATAAATGGGGCTGATGAATTAAAGGTAATTTTTGGGCATAGTAGAGAAGATGATGCCAACTATCGTGAGACAATTGTGCTTTCAAGCTTGACGATGATAACACTAATAAATTTGCCAAATTTGGTGAGTGTTTTCCAAGGGTTGCAGTTTCAGGTGCAGCTAAGCCACATCAGCATTTGCAACTGCCCCAGATTTGTAGATTCAAGTTTCGGATCGATTCTTCAACAATTGACAACAATAACGTTGCGGCAGGATTCTACAGAAGATTCAAATGTTCAAACTTCATTAGATGCAAAAGAACAATTGTTTGTAAATGAAGAAAAAGCGATGATGTTGATCTCAGGAGTGGAGCACTTGTCTTTGAAGGATTCAATGGACCTCATGTCCATATGGGAGGGTCCCAGTTTCATCATGTTCCAAAATCTTAAGGACTTTTATGTGAGTAAATGTAGAAAATTGAAGTGCATCTTCCCTAGCACTGTGATCAGAAGCCTACCATGTTTGGAGCGTCTAGAGATTGAAGAATGTGAAGAGTTGGAAGAGATGATGTCATCTGAAGAGCATCACTTTCCAAACGCGTATTCCTCTCATTATTCCTTCTGCTTCCCACAACTTCGAGATCTTAGAGTCATTAGATGCAGAAAGTTGAAATGGCTCTTCCTCTCCACTGAAAATCTTCCACAGTTGAAACATCTGAAGATTAAAGATTGCTCTAAACTAAAGGGACTTTTCAACTGCGAACCTGAAATCCATGAGGAAGGCTTCTATGATAACATGTTTCCAAAGTTGAAATATCTTACTGTTGAGGATTGCCCCATTTTCTCCCAAACCACACTTGCTGCTCTAAGTCTGCAGCGTCAAAACGAAGAGACACGTTATGATCAACTAAGGAAGGCGACGACGATGGAGAAACGAAGTTGCCCAGAGTATGTTTCCACCTAA 5130 0.394 MAEVGLSVAAKLAEYLVHPTFQQLQCLVCVRKITRNVDIRKEELILKQGRVQELVQEAIKRTERIDDEVNKWKNDVKSLIAEVEKLEEGLKANHGCLRGWCPTWKRYCLCKKLAKTAQRMIDLNTKSDCFSSFSHPVIIPDIDYHSPQNFKLFNSTQNAFDQLCEALRDDGSSIIGLWGMGGSGKTTLVKEVGKKAKELQIFDRVVLTTISQSPNVRKIQGEIADTLGLKLSEEFEIGRAKRIALRLQSGERILIILDDVWAMLDLEDIGILTGGNHQRSCKVVLTTRRLEVCNLMECQKMIQLHLLKEDEAWTLFQTHARVDDVAKEVVAHEIAMECKGLPIAIVAMGTCLRGKGVDEMNVALCRLRNAKPNNVDKGVRNAFACLELSYDYLATPKAKLLLLMCAMFPEDHGIVVEDLLRNGVGLGLCKDADSFETARSQVRATINYLIDSSFLMRFWKFNMYTQEYVTMHDVVRDFALWKASEEDRTIMVNCTKELNKLITDEAIKDCYAVSSWYHNNELFQFPSHLDAPKLEFLLLRSIKPLDISHTSFEGTKGLKALIIMCKYEASVELQPQSIQWLSNLQTLRLQYWDLHDISFVLSLTRLEILDLQGSKFERMPNGIEKLNKLKLLDLSSCTIDECCYEAIGRCLELEELYVSKHFPHSKNANCYQYLADPAALMKLRRYKLEIGEHGIGFASQNEEDARSLHLGQLNISILGARIKDLAQRATVIKFYELKRGSKIFMPDIAQVVGGTNELTKLHLERCSEIECITNETTLHEDAVVPRLDELVLRDMDNLKQLHRGPSPFSLFQKLKRLSIFNCPQLLYIYPADCNLGNLKFLNISSCPMLTSLFPVSTACTLLSLENLQIEGCSELMHVLEGEGGGDAWENSRVPELKYLSIDNCCKLESVCPVFLAQRFVQLQDLSIMNAPQMKFVFGENAGEEQPIMHDQDVTQIVLPLLKYIKLKNLPNIVGICSKRYRSRYPSIKRIEWTDCPNMGLQELKCHELAAMEWIELDNYGVESIFHRQTGVQEQIPTLQYLRNLTLKKCARLKFVFSDHIYQSLPELTSATISCCEELDAIFAGNEETQKNLSITQSCLLKLKSLKVSKCNKLKFILSFMISASITSVLPQLSNLTISYCSQMEEIFNCSNNEEHEIDSDKEITFPNMRDMELKNLPRLANVCQGFKLLTGELCRVQVHDCPRLMPIMGATIDYTKEVMWQSMMVQTMELEEKKDFSNAEHYIFLALNNLPLSVLNAGELDVQSPRIARWRIIGDDEQEETSDSEEQQMPGGLVPTQVLSFQHVHSLKVTRCEKLKFVFSMSTIVHNSLPRLTSLTLFDCEKLEEIIAENEEHKIMSNGQVCFPELKELRVGRCNKLKRLFSTSAAIILPQLNFLWINGADELKVIFGHSREDDANYRETIVLSSLTMITLINLPNLVSVFQGLQFQVQLSHISICNCPRFVDSSFGSILQQLTTITLRQDSTEDSNVQTSLDAKEQLFVNEEKAMMLISGVEHLSLKDSMDLMSIWEGPSFIMFQNLKDFYVSKCRKLKCIFPSTVIRSLPCLERLEIEECEELEEMMSSEEHHFPNAYSSHYSFCFPQLRDLRVIRCRKLKWLFLSTENLPQLKHLKIKDCSKLKGLFNCEPEIHEEGFYDNMFPKLKYLTVEDCPIFSQTTLAALSLQRQNEETRYDQLRKATTMEKRSCPEYVST 1709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral42g00004 1709 SUPERFAMILY RNI-like 893 1147 - -
Pral42g00004 1709 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1130 1422 - -
Pral42g00004 1709 Pfam NB-ARC domain 160 391 IPR002182 GO:0043531
Pral42g00004 1709 Gene3D - 306 393 IPR042197 -
Pral42g00004 1709 SMART AAA_5 171 326 IPR003593 GO:0016887
Pral42g00004 1709 SUPERFAMILY RNI-like 1301 1671 - -
Pral42g00004 1709 Gene3D Ribonuclease Inhibitor 1282 1408 IPR032675 -
Pral42g00004 1709 Gene3D Ribonuclease Inhibitor 957 1161 IPR032675 -
Pral42g00004 1709 Gene3D Ribonuclease Inhibitor 1423 1652 IPR032675 -
Pral42g00004 1709 Coils Coil 55 89 - -
Pral42g00004 1709 Coils Coil 1675 1695 - -
Pral42g00004 1709 SUPERFAMILY L domain-like 471 931 - -
Pral42g00004 1709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 403 IPR027417 -
Pral42g00004 1709 PRINTS Disease resistance protein signature 338 352 - -
Pral42g00004 1709 PRINTS Disease resistance protein signature 247 261 - -
Pral42g00004 1709 PRINTS Disease resistance protein signature 174 189 - -
Pral42g00004 1709 PRINTS Disease resistance protein signature 624 640 - -
Pral42g00004 1709 Gene3D - 142 304 IPR027417 -
Pral42g00004 1709 FunFam Probable disease resistance protein At1g61300 146 301 - -
Pral42g00004 1709 Gene3D Ribonuclease Inhibitor 507 936 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral42g00004 Pral-Chr42 18875 26527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral42g00004 175 634 WRKY Transcription Factor Family AT5G45050 23.790 9.67e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral42g00004 - - pcin:129317821 1551.95