Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4296g00066 ATGAGTCAACTTGGGCTAATGTTGCGGGAATCGCTTCAGAGAGACCGAGAGGAAAGAACGATTCTGGGTTTGTTAACGGAGCAGATGGAATCTGCGAACGGGGATGATCATAGTGATAGAGAGCCTCGAAGGAGACGGAGTTTAAAAGAACGGCTAAGATTCACCGGTATGGGGTGTTGTGGGGCCACCTGGGGTTTTCGTCCGGCCTCCGTTAGGCGCGAAGGAGAGGAGGAGGAGGAAGAAGAAGACGACGACGAACGGCGGCAGCAGCGGCAAAGGCTTCAAGAACCGAATCCTGGTCAAGGATCGAGCTCATCAGACCCGGATTGTTTGAGCCCCAACCCAGCGGGTTCGGGCATGAATCTTGCGGCGGCATTGGCGGCGGAGCGTCAATTTCGGGGGACGCAAGAACCAGAAACTGGGAGGCAAGGAACCACCGGAGACAATTTCCGGCGGGAAGGAGTGGGTGCGGCGCCGGGGACGCCGTGGAGGGTGTCGCTGATGAGGCTGCTAGAGGAGGGTGAGGGAGGCGACGTGGACATGACGGTGACGGTGACGGAGAACGGAGGAGCGGGGAATGATACGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGAGCGGCATTTATCCCATGTGGGCATACTTTTTGCAGAGTGTGCTCCAGAGAGCTGTGGCTCAACCGAGGGACCTGTCCCCTCTGTAACCGTTCGATCCTCGAGATTCTCGACATCTTCTGA 738 0.5745 MSQLGLMLRESLQRDREERTILGLLTEQMESANGDDHSDREPRRRRSLKERLRFTGMGCCGATWGFRPASVRREGEEEEEEEDDDERRQQRQRLQEPNPGQGSSSSDPDCLSPNPAGSGMNLAAALAAERQFRGTQEPETGRQGTTGDNFRREGVGAAPGTPWRVSLMRLLEEGEGGDVDMTVTVTENGGAGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4296g00066 245 SUPERFAMILY RING/U-box 186 242 - -
Pral4296g00066 245 MobiDBLite consensus disorder prediction 94 112 - -
Pral4296g00066 245 MobiDBLite consensus disorder prediction 132 159 - -
Pral4296g00066 245 Pfam Zinc finger, C3HC4 type (RING finger) 194 239 - -
Pral4296g00066 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 244 IPR013083 -
Pral4296g00066 245 PANTHER OS01G0917900 PROTEIN 5 245 - -
Pral4296g00066 245 MobiDBLite consensus disorder prediction 1 119 - -
Pral4296g00066 245 ProSiteProfiles Zinc finger RING-type profile. 197 235 IPR001841 -
Pral4296g00066 245 CDD RING-HC 197 234 - -
Pral4296g00066 245 SMART ring_2 197 234 IPR001841 -
Pral4296g00066 245 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4296g00066 Pral-Chr4296 429802 430539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4296g00066 21 245 C3H Transcription Factor Family AT4G22250 46.552 8.66e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4296g00066 - - pcin:129286609 370.933